These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9770#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1790 fasta sequence [ACTGTGTATATGTTTAAAATTAGAGTTTAGTATGCAAAATAGATTTCGGAGTAATGTACAAAAAGCGTGTGAAAATTTATTCATCGAATATAATGTGCTTGTGGTCAGTCTTATTACTTGGAAGTATACAATTACTGGATGATGTAGGATGAGGATTTGAAGACTTTTGTTTTTGACGTCTGTTTAATTGTGAAGTCCGATGACG-TTCTCTAGCATTTACCTTAGATTTGATAATACTGTCACAGTACGCTTGTTCACTAGGACCTTCAAGAATACGTGCTGTTACTCCATGAATAGTAGAAAGATTAACAAACTGTACCAATTTCAGAGCAGCCTTATTATCTTTCATTCGAATAAAAAGAGGAACAAATTCATCTGAGGAAATTGATTCATTTAGATTAGCATTCGATATCATACAACACCCAAATTGGTTAACAGAATCCAATAGACTTTGGTTAGGGTTTGGATCTACATGAGCAACATCTTTTAAAAGATTACATGGAACAAGAAGATTCTTTTCTAGACTAATACGTAGACATCGAGCAAATGATAACTTCTTAGGTGTTATTAGTGTATCACCAAGACCATCAGACAGACGTGTATCTGCTGCATCTCCTTTAGGAATTAATACTGAAGGCCAGTATATCTGAACAATAGAATTCGGAACAAAATTATTTGGAAGTGCTTTCGATTTAGTT-GAAGATTCATCTAAACATTTTACTAGCAGTGAATTTCGATTCATTTCAGAATCTATTTCATGACATTCTTTCTCTTCCATATTGTCGTCTTCCCCTC-TCATCATTATTATTGTTACTCATATTTTTGTTAGTCATTAATTCAGTTTTATGATTCATTCTGACAATCCATGCTTGTTGCCACAAATAGAACTTTTGCTTCCAAAATATCCAATCAGAATAACGAAATACACGTAGTTTAGATTGACATGGTNTCAGAAGTACAATTGTTTTTAACATAATTCAGTATAGTCTCTGTAGAATTATCACCAAGTATAATTGAATAATATTCCCTATCACATGGATTACTAGCAGTGTATCCGACCTGACGTAAATGTTTGAACGCTGCAATAAGTTGTTTATTCTTTCGAGAGCAACAACGCCAAATATGCCGTCTGGCTAACATTTGCTGAGGTGAAAAAGAAACTTTAGCTGCAAGTCGTGGTTTCCATGCTGATTCTGGACAATCAGATACTTCATTTGTTTCAGTAGGTTGCACGAGCCATTGTTCATTTTCCATGAAAAGACACATATGTTTAACAGCTTTTCTAGCAGATTTAGACGTTCTGAATTCAACGAAAGCAAATCCTCGGAGTGAATTGGAATGATGGTAACGAGGTAAACTGACAAACAGGACTTCGCCGTATTCTTCAAACACATTCCGAATCCAGTCACCAAGTTCCCAACTTGCTGAGGTTATGTTTCTCAGCTCATCTTCATTTGGTTTTGAACTGTGCCTATAAGAAGTGTTGTCCACATCTGCGTTTTCTGTTATTCCGATGGATAAACGTGGAAGTCCTGTGACTAGGATAGTTCGTCTCTCACGAGGTCCC-AACTCAGATAACGGCAATACTCGGACAATAGCCAACCCATCATTAGACAGCTTCAGAATTTTTGATGTTCCAACAACATTTTTTAGAATGTCCTCAGTGACATTCATAGCAATCATACGATTACACTTCAGCAGTAGATCTATTGGGATACCACCATCATCTCGTTTTTGCATTTCCTGTTTGAAGAAGCTATCGCGATTTAAGTTTCCTTCACTTAAGTAAA] [-] EMBL AI014203 [ACTGTGTATATGTTTAAAATTAGAGTTTAGTATGCAAAATAGATTTCGGAGTAATGTACAAAAAGCGTGTGAAAATTTATTCANCGAATATAATGTGCTTGTGGTCAGTCTTATTACTTGGAAGTATACAATTACTGGATGATGTAGGATGAGGATTTGAAGACTTTTGTTTTTGACGTCTGTTTAATTGTGAAGTCCGATGACG TTCTCTAGCATTTACCTTAGATTTGATAATACTGTCACAGTA ] [+] EMBL CD074402 [ TATATGTTTAAAATTAGAGTTTAGTATGCAAAATAGATTTCGGAGTAATGTACAAAAAGCGTGTGAAAATTTATTCATCGAATATAATGTGCTTGTGGTCAGTCTTATTACTTGGAAGTATACAATTACTGGATGATGTAGGATGAGGATTTGAAGACTTTTGTTTTTGACGTCTGTTTAATTGTGAAGTCCGATGACG TTCTCTAGCATTTACCTTAGATTTGATAATACTGTCACAGTACGCTTGTTCACTAGGACCTTCAAGAATACGTGCTGTTACTCCATGAATAGTAGAAAGATTAACAAACTGTACCAATTTCAGAGCAGCCTTATTATCTTTCATTCGAATAAAAAGAGGAACAAATTCATCTGAGGAAATTGATTCATTTAGATTAGCATTCGATATCATACAACACCCAAATTGGTTAACAGAATCCAATAGACTTTGGTTAGGGTTTGGATCTACATGAGCAACATCTTTTAAAAGATTACATGGAACAAGAAGATTCTTTTCTAGACTAATACGTAGACATCGAGCAAATGATAACTTCTTAGGTGTTATTAGTGTATCACCAAGACCATCAGACAGACGTGTATCTGCTGCATCTCCTTTAGGAATTAATACTGAAGGCCAGTAT ] [+] EMBL CD077127 [ aCATCGAATATAATGTGCTTGGGGTCAGTCTTATTACTTGGAGGTGTACAATTACTGGATGATGTAGGATGACGATTTGAAGACTTTTGTTTTTGACGTCTGTTTAATTGTGAAGTCCGATGACG TTCTCTAGCATTTACCTTACATTGGATAATACTGTCACAGTACGCTTGTTCACTATGACCTTCAAGAATACGTGCTGTTACTCCATGAATAGTAGAAAGATTAACAAACTGTACCAATTTCAGAGCAGCCTTATTATCTTTCATTCGAATAAAAAGAGGAACAAATTCATCTGAGGAAATTGATTCATTTACATTAGCATTCGATATCATACAACACCCAAATTGGTTAACAGAATCCAATAGACTTTGGTTAGGGTTTGGATCTACATGAGCAACATCTTTTAAAAGATTACATGGAACAAG ] [-] EMBL CD080490 [ GACGTTTCTCTAGCATTTACCTTAGATTTGATAATACTGTCACAGTACGCTTGTTCACTAGGACCTTCAAGAATACGTGCTGTTACTCCATGAATAGTAGAAAGATTAACAAACTGTACCAATTTCAGAGCAGCCTTATTATCTTTCATTCGAATAAAAAGAGGAACAAATTCATCTGAGGAAATTGATTCATTTAGATTAGCATTCGATATCATACAACACCCAAATTGGTTAACAGAATCCAATAGACTTTGGTTAGGGTTTGGATCTACATGAGCAACATCTTTTAAAAGATTACATGGAACAAGAAGATTCTTTTCTAGACTAATACGTAGACATCGAGCAAATGATAACTTCTTAGGTGTTATTAGTGTATCACCAAGACCATCAGACAGACGTGTATCTGCTGCATCTCCTTTAGGAATTAATACTGAAGGCCAGTATATCTGAACAATAGAATTCGGAACAAAATTATTTGGAAGTGCTTTCGATTTAGTT GAAGATTCATCTAAACATTTTACTAGCAGTGAATTTCGATTCATTTCAGAATCTATTTCATGACATTCTTTCTCTTCCATATTGTCGTCTTCCCCTC ] [+] EMBL CD130599 [ TAGTGTATCACCAAGACCATCAGACAGACGTGTATCTGCTGCATCTCCTTTAGGAATTAATACTGAAGGCCAGTATATCTGAACAATAGAATTCGGAACAAAATTATTTGGAAGTGCTTTCGATTTAGTTNGAAGATTCATCTAAACATTTTACCAGCAGTGAATTTCGATTCATTTCAGAATCTATTTCATGACATTCTTTCTCTTCCATATTGTCGTC TCTCATCATCATCATTATTATTGTTACTCATATTTTTGTTAGTCATTAATTCAGTTTTATGATTCATTCTGACAATCCATGCTTGTTGCCACAAATAGAACTTTTGCTTCCAAAATATCCAATCAGAATAACGAAATACACGTAGTTTAGATTGACATGGTNTCAGAAGTACAATTGTTTTTAACATAATTCAGTATAGTCTCTGTAGAATTATCACCAAGTATAATTGAATAATATTCCCTATCACATGGATTACTAGCAGTGTATCCGACCTGACGTAAATGTTTGAACGCTGCAATAAGTTGTTTATTCTTTCGAGA ] [-] EMBL CD139209 [ ACTAGCAGTGAATTTCGATTCATNTCAGAATCTATTTCATGACATTCTTTCTCTTCCATATTGTCGTCTTCATC A TCATCATTATTATTGTTACTCATATTTTTGTTAGTCATTAATTCAGTTTTATGATTCATTCTGACAATCCATGCTTGTTGCCACAAATAGAACTTTTGCTTCCAAAATATCCAATCAGAATAACGAAATACACGTAGTTTAGATTGACATGGT TCAGAAGTACAATTGTTTTTAACATAATTCAGTATAGTCTCTGTAGAATTATCACCAAGTATAATTGAATAATATTCCCTATCACATGGATTACTAGCAGTGTATCCGACCTGACGTAAATGTTTGAACGCTGCAATAAGTTGTTTATTCTTTCGAGAGCAACAACGCCAAATATGCCG ] [+] EMBL CD147194 [ GACGTAAATGTTTGAACGCTGCAATAAGTTGTTTATTCTTTCGAGAGCAACAACGCCAAATATGCCGTCTGGCTAACATTTGCTGAGGTGAAAAAGAAACTTTAGCTGCAAGTCGTGGTTTCCATGCTGATTCTGGACAATCAGATACTTCATTTGTTTCAGTAGGTTGCACGAGCCATTGTTCATTTTCCATGAAAAGACACATATGTTTAACAGCTTTTCTAGCAGATTTAGACGTTCTGAATTCAACGAAAGCAAATCCTCGGAGTGAATTGGAATGATGGTAACGAGGTAAACTGACAAACAGGACTTCGCCGTATTCTTCAAACACATTCCGAATCCAGTCACCAAGTTCCCAACTTGCTGAGGTTATGTTTCTCAGCTCATCTTCATTTGGTTTTGAACTGTGCCTATAAGAAGTGTTGTCCACATCTGCGTTTTCTGTTATTCCGATGGATAAACGTGGAAGTCCTGTGACTAGGATAGTTCGTCTCTCACGAGGTCCCAAACTCAGAT ACGGGCATACTn ] [+] EMBL CD147166 [ GACGTAAATGTTTGAACGCTGCAATAAGTTGTTTATTCTTTCGAGAGCAACAACGCCAAATATGCCGTCTGGCTAACATTTGCTGAGGTGAAAAAGAAACTTTAGCTGCAAGTCGTGGTTTCCATGCTGATTCTGGACAATCAGATACTTCATTTGTTTCAGTAGGTTGCACGAGCCATTGTTCATTTTCCATGAAAAGACACATATGTTTAACAGCTTTTCTAGCAGATTTAGACGTTCTGAATTCAACGAAAGCAAATCCTCGGAGTGAATTGGAATGATGGTAACGAGGTAAACTGACAAACAGGACTTCGCCGTATTCTTCAAACACATTCCGAATCCAGTCACCAAGTTCCCAACTTGCTGAGGTTATGTTTCTCAGCTCATCTTCATTTGGTTTTGAACTGTGCCTATAAGAAGTGTTGTCCACATCTGCGTTTTCTGTTATTCCGATGGATAAACGTGGAAGTCCTGTGACTAGGATAGTTCGTCTCTCACGAGGTCCC AACTCAGATAACGGCAATACTCGGACAATAGCCAACCCATCATTAGACAGCTTCAGAATTTTTGATGTTCC ] [+] EMBL CD147205 [ GACGTAAATGTTTGAACGCTGCAATAAGTTGTTTATTCTTTCGAGAGCAACAACGCCAAATATGCCGTCTGGCTAACATTTGCTGAGGTGAAAAAGAAACTTTAGCTGCAAGTCGTGGTTTCCATGCTGATTCTGGACAATCAGATACTTCATTTGTTTCAGTAGGTTGCACGAGCCATTGTTCATTTTCCATGAAAAGACACATATGTTTAACAGCTTTTCTAGCAGATTTAGACGTTCTGAATTCAACGAAAGCAAATCCTCGGAGTGAATTGGAATGATGGTAACGAGGTAAACTGACAAACAGGACTTCGCCGTATTCTTCAAACACATTCCGAATCCAGTCACCAAGTTCCCAACTTGCTGAGGTTATGTTTCTCAGCTCACCTTCATTTGGTTTTGAACTGTGCCTATAAGAAGTGTTGTCCACATCTGCGTTTTCTGTTATTCCGATGGATAAACGTGGAAGTCCTGTGACTAGGATAGTTCGTCTCTCACGAGGTCCC AACTCAGATAACGGCAATACTCGGACAATAGCCAACCCATCATTAGACAGCTTCAGAATTTTTGATGTTCC ] [+] EMBL CD147107 [ GACGTAAATGTTTGAACGCTGCAATAAGTTGTTTATTCTTTCGAGAGCAACAACGCCAAATATGCCGTCTGGCTAACATTTGCTGAGGTGAAAAAGAAACTTTAGCTGCAAGTCGTGGTTTCCATGCTGATTCTGGACAATCAGATACTTCATTTGTTTCAGTAGGTTGCACGTGCCATTGTTCATTTTCCATGAAAAGACACATATGTTTAACAGCTTTTCTAGCAGATTTAGACGTTCTGAATTCAACGAAAGCAAATCCTCGGAGTGAATTGGAATGATGGTAACGAGGTAAACTGACAAACAGGACTTCGCCGTATTCTTCAAACACATTCCGAATCCAGTCACCAAGTTCCCAACTTGCTGAGGTTATGTTTCTCAGCTCATCTTCATTTGGTTTTGAACTGTGCCTATAAGAAGTGTTGTCCACATCTGCGTTTTCTGTTATTCCGATGGATAAACGTGGAAGTCCTGTGACTAGGATAGTTCGTCTCTCACGAGGTCCC AACTCAGATAACGGCAATACTCGGACAATAGCCAACCCATCA ] [-] EMBL CD127748 [ ATTGTTCATTTTCCATGAAAAGACACATATGTTTAACAGCTTTTCTAGCAGATTTAGACGTTCTGAATTCAACGAAAGCAAATCCTCGGAGTGAATTGGAATGATGGTAACGAGGTAAACTGACAAACAGGACTTCGCCGTATTCTTCAAACACATTCCGAATCCAGTCACCAAGTTCCCAACTTGCTGAGGTTATGTTTCTCAGCTCATCTTCATTTGGTTTTGAACTGTGCCTATAAGAAGTGTTGTCCACATCTGCGTTTTCTGTTATTCCGATGGATAAACGTGGAAGTCCTGTGACTAGGATAGTTCGTCTCTCACGAGGTCCC AACTCAGATAACGGCAATACTCGGACAATAGCCAGCCCATCATTAGACAGCTTCAGAATTTTTGATGTTCCAACAACATTTTTTAGAATGTCCTCAGTGACATTCATAGCAATCATACGATTACACTTCAGCAGTAGATCTATTGGGATACCACCATCATCTCGTTTTTGCATTTCCTGTTTGAAGAAGCTATCGCGATTTAAGTTTCCTTCACTTAAGTAAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||