cluster # 9780

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Schistosoma mansoni
cluster # 9780 cluster # 9780 Sequences # 11 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9780#0 length = 1504 sequences # 4
consensus_9780#1 length = 672 sequences # 1

consensus_9780#2 length = 623 sequences # 1
consensus_9780#3 length = 571 sequences # 3
consensus_9780#4 length = 495 sequences # 2

consensusID : consensus_9780#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1504
fasta sequence

                              [GGTTTTACTCTTGTGATTTGTTGCATGATTATCTTTATTGGCTCATTTCCATAAGTAAACTAAACCATTATCTATTTCATTTCGTGTTTTTCTAACCAGGCTGTCAGAAAACATAGATAGCTCATGTTAATCAAAGATTTAGATTTATGCATACAGGATTATTCATCTGAGAAAATCTGAATTTATTAATTTCTATTTGGATATTAATACTGACATCATATAAATATATATGATGCTTCATATTACTACTATGACGGATAAAGCACCAATTAAAACAAATAAACGTCTACAACAAACTCAAGCTCAAGTTAATGAAGTTGTTGATATTATGCGAGTTAATGTTGACAAAGTACTGGAAAGAGATAAAAATCTTTCTGAACTTGATGGTCGAGCCGATGCGTTGCAAGCTGGTGCTTCTCAATTCGAAGCTAGTGCTGGTAAACTGAAAAGAAAATTTTGGTGGAAAAATTGCAAAATGCTAGCCGTATTGGGTGTACTAGTAGTTATTTTAATTATCGTATTAATTGTATGGGTCGTTTCTGAACAAAAAAATAAAGTTGAACAAAGTGAACATTCATCTCATCATCTTGTGATGGATAACTCATCGCATTTATTATCGGAACCAGTGATGATGGAGCATTCAAGAGAAGGAAAACCAATTTTTCCTGATCATCATATGATAAGTTTGAATGAAATAAATACTGAAACGCCATCATCTTTTAATTCTAATAAAATAAAATCTAAAGGATTTAAAGAATTACCATCACCTCCATCGTCGTTGTCAACTTCTCCTTCTTATTCCCCCTCTTTCTCTTCGTACCCCTCTTTGTCTCAACATCATTTTGAAAACAATGAAACATCATTGTTTTAATTGGATTTTTCTTCATGAATCGATTATTGATTAATCTCCGAACTGTGCCTGGGATCAATTATCACTACACACATTCATTTTCATACGTACACCATTGCTGTTAATTGGTGATGGCCAGTGTAAACCAAAATAAGTGATATTATTATTTATTTATTTTATGCACATATAAAACAAAAGAGATCATGTAACATTGTTGTTCTCTCTTTCTTGCTCGCTTGTTCACTTGTTTTTTTACTCTGACAAAACTCAGATAATCGAGACCATATATTAATTAGTTAATGCATGTGCATTGACAAATTGTGTAATGTGTATTAATCTATTTTTAGTGTACATTTTTGTCTATCGGCCTGTCTTTGTCTGTATGCCTTTATGTAATTATGTATGTGTATCATCCAGTTATTACCGTTATTTATACTACTATGANCACTATTAGTACTTCTTATATGATTGAATATTACTATTTATTTCTGATCTTTTCATCCTTTACTCTAGTATGTCGTTTTTTCCTTTTTTCTATTTTTATGTGGATTAGCATATGAAACGAAACAGGAGAAAAAGGCAATATTTGATCATTTCTCTAAGTTGTTCATTTTGATGTTCTCTATGATAATGGTGATAAAGTTCCTTGCATTT]

[+] EMBL SM30183              [GGTTTTACTCTTGTGATTTGTTGCATGATTATCTTTATTGGCTCATTTCCATAAGTAAACTAAACCATTATCTATTTCATTTCGTGTTTTTCTAACCAGGCTGTCAGAAAACATAGATAGCTCATGTTAATCAAAGATTTAGATTTATGCATACAGGATTATTCATCTGAGAAAATCTGAATTTATTAATTTCTATTTGGATATTAATACTGACATCATATAAATATATATGATGCTTCATATTACTACTATGACGGATAAAGCACCAATTAAAACAAATAAACGTCTACAACAAACTCAAGCTCAAGTTAATGAAGTTGTTGATATTATGCGAGTTAATGTTGACAAAGTACTGGAAAGAGATAAAAATCTTTCTGAACTTGATGGTCGAGCCGATGCGTTGCAAGCTGGTGCTTCTCAATTCGAAGCTAGTGCTGGTAAACTGAAAAGAAAATTTTGGTGGAAAAATTGCAAAATGCTAGCCGTATTGGGTGTACTAGTAGTTATTTTAATTATCGTATTAATTGTATGGGTCGTTTCTGAACAAAAAAATAAAGTTGAACAAAGTGAACATTCATCTCATCATCTTGTGATGGATAACTCATCGCATTTATTATCGGAA CAGTGATGATGGAGCA TC AGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD089656             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGTACTAGTAGTTATTTTAATTATCGTATTAATTGTATGGGTCGTTTCTGAACAAAAAAATAAAGTTGAACAAAGTGAACATTCATCTCATCATCTTGTGATGGATAACTCATCGCATTTATTATCGGAACCAGTGATGATGGGGCATTCAAGAGAAGGAAAACCAATTTTTCCTGATCATCATATGATAAGTTTGAATGAAATAAATACTGAAACGCCATCATCTTTTAATTCTAATAAAATAAAATCTAAAGGATTTAAAGAATTACCATCACCTCCATCGTCGTTGTCAACTTCTCCTTCTTATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD080436             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              aggcTGATGATGGAGCATTCAAGAGAAGGAAAACCAATTTTTCCTGATCATCATATGATAAGTTTGAATGAAATAAATACTGAAACGCCATCATCTTTTAATTCTAATAAAATAAAATCTAAAGGATTTAAAGAATTACCATCACCTCCATCGTCGTTGTCAACTTCTCCTTCTTATTCCCCCTCTTTCTCTTCGTACCCCTCTTTGTCTCAACATCATTTTGAAAACAATGAAACATCATTGTTTTAATTGGATTTTTCTTCATGAATCGATTATTGATTAATCTCCGAACTGTGCCTGGGATCAATTATCACTACACACATTCATTTTCATACGTACACCATTGCTGTTAATTGGTGATGGCCAGTGTAAACCAAAATAAGTGATATTATTATTTATTTATTTTATGCACATATAAAACAAAAGAGATCATGTAACATTGTTGTTCTCTCTTTCTTGCTCGCTTGTTCACTTGTTTTTTTACTCTGACAAAACTCAGATAATCGAGACCATATATTAATTAGTTAATGCATGTGCATTGACAAATTGTGTAATGTGTATTAATCTATTTTTAGTGTACATTTTTGTCTATCGGCCTGTCTTTGTCTGTATGCCTTTATGTAATTATGTATGTGTATCATCCAGTTATTACCGTTATTTATACTACTATGANCACTATTAGTACT                                                                                                                                                                                                    ]
[-] EMBL CD074831             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CATTGTTTTAATTGGATTNTTCTTCATGAATCGATTATTGATTAATCTCCGAACTGTGCCTGGGATCAATTATCACTACACACATTCATTTTCATACGTACACCATTGCTGTTAATTGGTGATGGCCAGTGTAAACCAAAATAAGTGATATTATTATTTATTTATTTTATGCACATATAAAACAAAAGAGATCATGTAACATTGTTGTTCTCTCTTTCTTGCTCGCTTGTTCACTTGTTTTTTTACTCTGACAAAACTCAGATAATCGAGACCATATATTAATTAGTTAATGCATGTGCATTGACAAATTGTGTAATGTGTATTAATCTATTTTTAGTGTACATTTTTGTCTATCGGCCTGTCTTTGTCTGTATGCCTTTATGTAATTATGTATGTGTATCATCCAGTTATTACCGTTATTTATACTACTATGACAACTATTAGTACTTCTTATATGATTGAATATTACTATTTATTTCTGATCTTTTCATCCTTTACTCTAGTATGTCGTTTTTTCCTTTTTTCTATTTTTATGTGGATTAGCATATGAAACGAAACAGGAGAAAAAGGCAATATTTGATCATTTCTCTAAGTTGTTCATTTTGATGTTCTCTATGATAATGGTGATAAAGTTCCTTGCATTT]




>consensus_9780#0
GGTTTTACTCTTGTGATTTGTTGCATGATTATCTTTATTGGCTCATTTCCATAAGTAAAC
TAAACCATTATCTATTTCATTTCGTGTTTTTCTAACCAGGCTGTCAGAAAACATAGATAG
CTCATGTTAATCAAAGATTTAGATTTATGCATACAGGATTATTCATCTGAGAAAATCTGA
ATTTATTAATTTCTATTTGGATATTAATACTGACATCATATAAATATATATGATGCTTCA
TATTACTACTATGACGGATAAAGCACCAATTAAAACAAATAAACGTCTACAACAAACTCA
AGCTCAAGTTAATGAAGTTGTTGATATTATGCGAGTTAATGTTGACAAAGTACTGGAAAG
AGATAAAAATCTTTCTGAACTTGATGGTCGAGCCGATGCGTTGCAAGCTGGTGCTTCTCA
ATTCGAAGCTAGTGCTGGTAAACTGAAAAGAAAATTTTGGTGGAAAAATTGCAAAATGCT
AGCCGTATTGGGTGTACTAGTAGTTATTTTAATTATCGTATTAATTGTATGGGTCGTTTC
TGAACAAAAAAATAAAGTTGAACAAAGTGAACATTCATCTCATCATCTTGTGATGGATAA
CTCATCGCATTTATTATCGGAACCAGTGATGATGGAGCATTCAAGAGAAGGAAAACCAAT
TTTTCCTGATCATCATATGATAAGTTTGAATGAAATAAATACTGAAACGCCATCATCTTT
TAATTCTAATAAAATAAAATCTAAAGGATTTAAAGAATTACCATCACCTCCATCGTCGTT
GTCAACTTCTCCTTCTTATTCCCCCTCTTTCTCTTCGTACCCCTCTTTGTCTCAACATCA
TTTTGAAAACAATGAAACATCATTGTTTTAATTGGATTTTTCTTCATGAATCGATTATTG
ATTAATCTCCGAACTGTGCCTGGGATCAATTATCACTACACACATTCATTTTCATACGTA
CACCATTGCTGTTAATTGGTGATGGCCAGTGTAAACCAAAATAAGTGATATTATTATTTA
TTTATTTTATGCACATATAAAACAAAAGAGATCATGTAACATTGTTGTTCTCTCTTTCTT
GCTCGCTTGTTCACTTGTTTTTTTACTCTGACAAAACTCAGATAATCGAGACCATATATT
AATTAGTTAATGCATGTGCATTGACAAATTGTGTAATGTGTATTAATCTATTTTTAGTGT
ACATTTTTGTCTATCGGCCTGTCTTTGTCTGTATGCCTTTATGTAATTATGTATGTGTAT
CATCCAGTTATTACCGTTATTTATACTACTATGANCACTATTAGTACTTCTTATATGATT
GAATATTACTATTTATTTCTGATCTTTTCATCCTTTACTCTAGTATGTCGTTTTTTCCTT
TTTTCTATTTTTATGTGGATTAGCATATGAAACGAAACAGGAGAAAAAGGCAATATTTGA
TCATTTCTCTAAGTTGTTCATTTTGATGTTCTCTATGATAATGGTGATAAAGTTCCTTGC
ATTT

consensusID : consensus_9780#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 672
fasta sequence

                              [CTCGAGGGCCANAATTCGGCACGAGGGATTTTCCAGGCTGTCAGAAAACATAGATAGTGAGACAGACATTGTTATCTCAGGCTCATGTTAATCAAAGATTTAGATTTATGCATACAGGATTATTCATCTGAGAAAATCTGAATTTATTAATTCCTATTTGGATATTAATACTGACATCATATAAATATATATGNNNNNNNNNNNNNNNNNNNNNNNNATAAAGCACCAATTAAAACAAATAAACGTCTACAACAAACTCAAGCTCAAGTTAATGAAGTTGTTGATATTATGCGAGTTAATGTTGACAAAGTACTGGAAAGAGATAAAAATCTTTCTGAACTTGATGGTCNNNNNNNNNNNNNNNNNNNNNGTGCTTCTCAATTCGAAGCTAGTGCTGGTAAACTGAAAAGAAAATTTTGGTGGAAAAATTGCAAATATGGGTCGTTTCTGAACAAAAAAATAAAGTTGAACAAAGTGAACATTCATCTCATCATCTTGTGATGGATAACTCATCGCATTTATTATCGGAACCNNNNATGATGGAGCATTCNNGAGAAGGAAAACCAATTTTTCCTGATCATCATATGATAAGTTTGAATGAAATAAATACTGAAACGCCATCATCTTTTAATTCTAATAAAATANAATCTAAAGGATTTAAAGAATTACCAT]

[+] EMBL CD081005             [CTCGAGGGCCANAATTCGGCACGAGGGATTTTCCAGGCTGTCAGAAAACATAGATAGTGAGACAGACATTGTTATCTCAGGCTCATGTTAATCAAAGATTTAGATTTATGCATACAGGATTATTCATCTGAGAAAATCTGAATTTATTAATTCCTATTTGGATATTAATACTGACATCATATAAATATATATGNNNNNNNNNNNNNNNNNNNNNNNNATAAAGCACCAATTAAAACAAATAAACGTCTACAACAAACTCAAGCTCAAGTTAATGAAGTTGTTGATATTATGCGAGTTAATGTTGACAAAGTACTGGAAAGAGATAAAAATCTTTCTGAACTTGATGGTCNNNNNNNNNNNNNNNNNNNNNGTGCTTCTCAATTCGAAGCTAGTGCTGGTAAACTGAAAAGAAAATTTTGGTGGAAAAATTGCAAATATGGGTCGTTTCTGAACAAAAAAATAAAGTTGAACAAAGTGAACATTCATCTCATCATCTTGTGATGGATAACTCATCGCATTTATTATCGGAACCNNNNATGATGGAGCATTCNNGAGAAGGAAAACCAATTTTTCCTGATCATCATATGATAAGTTTGAATGAAATAAATACTGAAACGCCATCATCTTTTAATTCTAATAAAATANAATCTAAAGGATTTAAAGAATTACCAT]




>consensus_9780#1
CTCGAGGGCCANAATTCGGCACGAGGGATTTTCCAGGCTGTCAGAAAACATAGATAGTGA
GACAGACATTGTTATCTCAGGCTCATGTTAATCAAAGATTTAGATTTATGCATACAGGAT
TATTCATCTGAGAAAATCTGAATTTATTAATTCCTATTTGGATATTAATACTGACATCAT
ATAAATATATATGNNNNNNNNNNNNNNNNNNNNNNNNATAAAGCACCAATTAAAACAAAT
AAACGTCTACAACAAACTCAAGCTCAAGTTAATGAAGTTGTTGATATTATGCGAGTTAAT
GTTGACAAAGTACTGGAAAGAGATAAAAATCTTTCTGAACTTGATGGTCNNNNNNNNNNN
NNNNNNNNNNGTGCTTCTCAATTCGAAGCTAGTGCTGGTAAACTGAAAAGAAAATTTTGG
TGGAAAAATTGCAAATATGGGTCGTTTCTGAACAAAAAAATAAAGTTGAACAAAGTGAAC
ATTCATCTCATCATCTTGTGATGGATAACTCATCGCATTTATTATCGGAACCNNNNATGA
TGGAGCATTCNNGAGAAGGAAAACCAATTTTTCCTGATCATCATATGATAAGTTTGAATG
AAATAAATACTGAAACGCCATCATCTTTTAATTCTAATAAAATANAATCTAAAGGATTTA
AAGAATTACCAT

consensusID : consensus_9780#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 623
fasta sequence

                              [GGTTTTACTCTTGTGATTTGTTGCATGGCTGTCAGAAAACATAGATAGTGAGACAGACATTTAAATATTTTCCTAACCTTGAACATTGTTATCTCAGGCTCATGTTAATCAAAGATTTAGATTTATGCATACAGGATTATTCATCTGAGAAAATCTGAATTTATTAATTTCTATTTGGATATTAATACTGACATCATATAAATATATATGATGCTTCATATTACTACTATGACGGATAAAGCACCAATTAAAACAAATAAACGTCTACAACAAACTCAAGCTCAAGTTAATGAAGTTGTTGATATTATGCGAGTTAATGTTGACAAAGTACTGGAAAGAGATAAAAATCTTTCTGAACTTGATGGTCGAGCCGATGCGTTGCAAGCTGGTGCTTCTCAATTCGAAGCTAGTGCTGGTAAACTGAAAAGAAAATTTTGGTGGAAAAATTGCAAAATGCTAGCCGTATTGGGTGTACTAGTAGTTATTTTAATTATCGTATTAATTGTATGGGTCGTTTCTGAACAAAAAAATAAAGTTGAACAAAGTGAACATTCATCTCATCATCTTGTGATGGATAACTCATCGCATTTATTATCGGAACAGTGATGATGGAGCATCAGAGA]

[+] EMBL SM30182              [GGTTTTACTCTTGTGATTTGTTGCATGGCTGTCAGAAAACATAGATAGTGAGACAGACATTTAAATATTTTCCTAACCTTGAACATTGTTATCTCAGGCTCATGTTAATCAAAGATTTAGATTTATGCATACAGGATTATTCATCTGAGAAAATCTGAATTTATTAATTTCTATTTGGATATTAATACTGACATCATATAAATATATATGATGCTTCATATTACTACTATGACGGATAAAGCACCAATTAAAACAAATAAACGTCTACAACAAACTCAAGCTCAAGTTAATGAAGTTGTTGATATTATGCGAGTTAATGTTGACAAAGTACTGGAAAGAGATAAAAATCTTTCTGAACTTGATGGTCGAGCCGATGCGTTGCAAGCTGGTGCTTCTCAATTCGAAGCTAGTGCTGGTAAACTGAAAAGAAAATTTTGGTGGAAAAATTGCAAAATGCTAGCCGTATTGGGTGTACTAGTAGTTATTTTAATTATCGTATTAATTGTATGGGTCGTTTCTGAACAAAAAAATAAAGTTGAACAAAGTGAACATTCATCTCATCATCTTGTGATGGATAACTCATCGCATTTATTATCGGAACAGTGATGATGGAGCATCAGAGA]




>consensus_9780#2
GGTTTTACTCTTGTGATTTGTTGCATGGCTGTCAGAAAACATAGATAGTGAGACAGACAT
TTAAATATTTTCCTAACCTTGAACATTGTTATCTCAGGCTCATGTTAATCAAAGATTTAG
ATTTATGCATACAGGATTATTCATCTGAGAAAATCTGAATTTATTAATTTCTATTTGGAT
ATTAATACTGACATCATATAAATATATATGATGCTTCATATTACTACTATGACGGATAAA
GCACCAATTAAAACAAATAAACGTCTACAACAAACTCAAGCTCAAGTTAATGAAGTTGTT
GATATTATGCGAGTTAATGTTGACAAAGTACTGGAAAGAGATAAAAATCTTTCTGAACTT
GATGGTCGAGCCGATGCGTTGCAAGCTGGTGCTTCTCAATTCGAAGCTAGTGCTGGTAAA
CTGAAAAGAAAATTTTGGTGGAAAAATTGCAAAATGCTAGCCGTATTGGGTGTACTAGTA
GTTATTTTAATTATCGTATTAATTGTATGGGTCGTTTCTGAACAAAAAAATAAAGTTGAA
CAAAGTGAACATTCATCTCATCATCTTGTGATGGATAACTCATCGCATTTATTATCGGAA
CAGTGATGATGGAGCATCAGAGA

consensusID : consensus_9780#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 571
fasta sequence

                              [GGTTTTACTCTTGTGATTTGTTGCATGGCTGTCAGAAAACATAGATAGTGAGACAGACATTTAAATATTTTCCTAACCTTGAACATTGTTATCTCAGGCTCATGTTAATCAAAGATTTAGATTTATGCATACAGGATTATTCATCTGAGAAAATCTGAATTTATTAATTTCTATTTGGATATTAATACTGACATCATATAAATATATATGATGCTTCATATTACTACTATGACGGATAAAGCACCAATTAAAACAAATAAACGTCTACAACAAACTCAAGCTCAAGTTAATGAAGTTGTTGATATTATGCGAGTTAATGTTGACAAAGTACTGGAAAGAGATAAAAATCTTTCTGAACTTGATGGTCGAGCCGATGCGTTGCAAGCTGGTGCTTCTCAATTCGAAGCTAGTGCTGGTAAACTGAAAAGAAAATTTTGGTGGAAAAATTGCAAATATGGGTCGTTTCTGAACAAAAAAATAAAGTTGAACAAAGTGAACATTCATCTCATCATCTTGTGATGGATAACTCATCGCATTTATTATCGGAACAGTGATGATGGAGCATCAGAGA]

[+] EMBL SM30180              [GGTTTTACTCTTGTGATTTGTTGCATGGCTGTCAGAAAACATAGATAGTGAGACAGACATTTAAATATTTTCCTAACCTTGAACATTGTTATCTCAGGCTCATGTTAATCAAAGATTTAGATTTATGCATACAGGATTATTCATCTGAGAAAATCTGAATTTATTAATTTCTATTTGGATATTAATACTGACATCATATAAATATATATGATGCTTCATATTACTACTATGACGGATAAAGCACCAATTAAAACAAATAAACGTCTACAACAAACTCAAGCTCAAGTTAATGAAGTTGTTGATATTATGCGAGTTAATGTTGACAAAGTACTGGAAAGAGATAAAAATCTTTCTGAACTTGATGGTCGAGCCGATGCGTTGCAAGCTGGTGCTTCTCAATTCGAAGCTAGTGCTGGTAAACTGAAAAGAAAATTTTGGTGGAAAAATTGCAAATATGGGTCGTTTCTGAACAAAAAAATAAAGTTGAACAAAGTGAACATTCATCTCATCATCTTGTGATGGATAACTCATCGCATTTATTATCGGAACAGTGATGATGGAGCATCAGAGA]
[+] EMBL SM30181              [GGTTTTACTCTTGTGATTTGTTGCATGGCTGTCAGAAAACATAGATAGTGAGACAGACATTTAAATATTTTCCTAACCTTGAACATTGTTATCTCAGGCTCATGTTAATCAAAGATTTAGATTTATGCATACAGGATTATTCATCTGAGAAAATCTGAATTTATTAATTTCTATTTGGATATTAATACTGACATCATATAAATATATATGATGCTTCATATTACTACTATGACGGATAAAGCACCAATTAAAACAAATAAACGTCTACAACAAACTCAAGCTCAAGTTAATGAAGTTGTTGATATTATGCGAGTTAATGTTGACAAAGTACTGGAAAGAGATAAAAATCTTTCTGAACTTGATGGTCGAGCCGATGCGTTGCAAGCTGGTGCTTCTCAATTCGAAGCTAGTGCTGGTAAACTGAAAAGAAAATTTTGGTGGAAAAATTGCAAATATGGGTCGTTTCTGAACAAAAAAATAAAGTTGAACAAAGTGAACATTCATCTCATCATCTTGTGATGGATAACTCATCGCATTTATTATCGGAACAGTGATGATGGAGCATCAGAGA]
[-] EMBL CD199928             [        TCTCGTGATTTGTTGCATGGCTGTCAGAAAACATAGATAGTGAGACAGACATTTAAATATTTTCTTAACCTTGAACATTGTTATCTCAGGCTCATGTTAATCAAAGATTTAGATTTATGCATACAGGATTATTCATCTGAGAAAATCTGAATTTATTAATTTCTATTTGGATATTAATACTGACATCATATAAATATATATGAT CTTCATAT                                                                                                                                                                                                                                                                                                                                                              ]




>consensus_9780#3
GGTTTTACTCTTGTGATTTGTTGCATGGCTGTCAGAAAACATAGATAGTGAGACAGACAT
TTAAATATTTTCCTAACCTTGAACATTGTTATCTCAGGCTCATGTTAATCAAAGATTTAG
ATTTATGCATACAGGATTATTCATCTGAGAAAATCTGAATTTATTAATTTCTATTTGGAT
ATTAATACTGACATCATATAAATATATATGATGCTTCATATTACTACTATGACGGATAAA
GCACCAATTAAAACAAATAAACGTCTACAACAAACTCAAGCTCAAGTTAATGAAGTTGTT
GATATTATGCGAGTTAATGTTGACAAAGTACTGGAAAGAGATAAAAATCTTTCTGAACTT
GATGGTCGAGCCGATGCGTTGCAAGCTGGTGCTTCTCAATTCGAAGCTAGTGCTGGTAAA
CTGAAAAGAAAATTTTGGTGGAAAAATTGCAAATATGGGTCGTTTCTGAACAAAAAAATA
AAGTTGAACAAAGTGAACATTCATCTCATCATCTTGTGATGGATAACTCATCGCATTTAT
TATCGGAACAGTGATGATGGAGCATCAGAGA

consensusID : consensus_9780#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 495
fasta sequence

                              [TCACTTGTTTTTTTACTTTGGCAAAACTCAGATAATCGAGCCCATATATTAATTAGTTAATGCATGGGCATTGACAAATTGGGTAAAGGGGATTAATCTATTTTTAGGGGACATTTTTGTCTATCGGCCTGTTTTTGTCTGTAGGCCTTTAGGGAATTAGGTATGGGGATCATCCAGTTATTCCCGTTATTTATACTACTATGCCAACTATTAGGACTTTTTATATGATTGAAAATTACTATTTATTTTTGATTTTTTCATCCTTTACTTTAGGAAGTCGTTTTTTCCTTTTTTTTATTTTTATGGGGATTAGCATATGAAACGAAACAGGAGAAAAAGGCAATATTTGATCATTTTTTTAAGTTGTTCATTTTGATGTTTTTTATGAAAATGGTGATAAAGTTCCTTGCATTTGTTCGTTTTACGGTTTGTTTGTTTTCATTTATTCATTTAACTAACTAAAAGGGTTAATATTGCAGTTATAAATTCGATGAC]

[-] EMBL CD074528             [TCACTTGTTTTTTTACTTTGGCAAAACTCAGATAATCGAGCCCATATATTAATTAGTTAATGCATGGGCATTGACAAATTGGGTAAAGGGGATTAATCTATTTTTAGGGGACATTTTTGTCTATCGGCCTGTTTTTGTCTGTAGGCCTTTAGGGAATTAGGTATGGGGATCATCCAGTTATTCCCGTTATTTATACTACTATGCCAACTATTAGGACTTTTTATATGATTGAAAATTACTATTTATTTTTGATTTTTTCATCCTTTACTTTAGGAAGTCGTTTTTTCCTTTTTTTTATTTTTATGGGGATTAGCATATGAAACGAAACAGGAGAAAAAGGCAATATTTGATCATTTTTTTAAGTTGTTCATTTTGATGTTTTTTATGAAAATGGTGATAAAGTTCCTTGCATTTGTTCGTTTTACGGTTTGTTTGTTTTCATTTATTCATTTAACTAACTAAAAGGGTTAATATTGCAGTTATAAATTCGATGAC]
[-] EMBL CD074349             [                                                                                                                                                                                                                                ATGATTGAAAATTCCTATTTATTTTTGATTTTTTCACCCTTTACTTTAGGATGTCGTTTTTTCCCTTTTTCTATTTTTATGGGGATTAGCATATGAAACGAACCAGGAAAAAAAGGCAATATTTGATCCTTTTTTTAAGTTGTTCATTTTGATGTTTTTTATGAAAATGGTGATAAAGTTCCCTGCATTTGTTCGTTTTACTGTTTGTTTGTTTTCCTTTATTCATTTAACTAACTAAAAGGGTTAATATTGCAGTTATAAATTCGATGAC]




>consensus_9780#4
TCACTTGTTTTTTTACTTTGGCAAAACTCAGATAATCGAGCCCATATATTAATTAGTTAA
TGCATGGGCATTGACAAATTGGGTAAAGGGGATTAATCTATTTTTAGGGGACATTTTTGT
CTATCGGCCTGTTTTTGTCTGTAGGCCTTTAGGGAATTAGGTATGGGGATCATCCAGTTA
TTCCCGTTATTTATACTACTATGCCAACTATTAGGACTTTTTATATGATTGAAAATTACT
ATTTATTTTTGATTTTTTCATCCTTTACTTTAGGAAGTCGTTTTTTCCTTTTTTTTATTT
TTATGGGGATTAGCATATGAAACGAAACAGGAGAAAAAGGCAATATTTGATCATTTTTTT
AAGTTGTTCATTTTGATGTTTTTTATGAAAATGGTGATAAAGTTCCTTGCATTTGTTCGT
TTTACGGTTTGTTTGTTTTCATTTATTCATTTAACTAACTAAAAGGGTTAATATTGCAGT
TATAAATTCGATGAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9780#2      ------------GGTTTTACTCTTGTGATTTGTTGCATGGCTGTC------AGAAAACAT 42
consensus_9780#3      ------------GGTTTTACTCTTGTGATTTGTTGCATGGCTGTC------AGAAAACAT 42
consensus_9780#1      CTCGAGGGCCANAATTCGGCACGAGGGATTTTCCA---GGCTGTC------AGAAAACAT 51
consensus_9780#0      ------------GGTTTTACTCTTGTGATTTGTTGCATGATTATCTTTATTGGCTCATTT 48
consensus_9780#4      ------------------------------------------------------------
                                                                                  

consensus_9780#2      AGATA-GTGAGACAGAC--------ATTTAA----ATATTTTCCTAACCTTGAACATTGT 89
consensus_9780#3      AGATA-GTGAGACAGAC--------ATTTAA----ATATTTTCCTAACCTTGAACATTGT 89
consensus_9780#1      AGATA-GTGAGACAGAC--------ATT------------------------------GT 72
consensus_9780#0      CCATAAGTAAACTAAACCATTATCTATTTCATTTCGTGTTTTTCTAACCAGGCTGTCAGA 108
consensus_9780#4      ------------------------------------------------------------
                                                                                  

consensus_9780#2      TATCTCAG---GCTCATGTTAATCAAAGATTTAGATTTATGCATACAGGATTATTCATCT 146
consensus_9780#3      TATCTCAG---GCTCATGTTAATCAAAGATTTAGATTTATGCATACAGGATTATTCATCT 146
consensus_9780#1      TATCTCAG---GCTCATGTTAATCAAAGATTTAGATTTATGCATACAGGATTATTCATCT 129
consensus_9780#0      AAACATAGATAGCTCATGTTAATCAAAGATTTAGATTTATGCATACAGGATTATTCATCT 168
consensus_9780#4      --------------------------TCACTTGTTTTTTTAC-TTTGGCAAAACTCAGAT 33
                                                  * **   *** * * *   * *  * ***  *

consensus_9780#2      GAGAAAATC--TGAATTTATTAATTTCTATTTGGATATTAATACTGACATCATATAAATA 204
consensus_9780#3      GAGAAAATC--TGAATTTATTAATTTCTATTTGGATATTAATACTGACATCATATAAATA 204
consensus_9780#1      GAGAAAATC--TGAATTTATTAATTCCTATTTGGATATTAATACTGACATCATATAAATA 187
consensus_9780#0      GAGAAAATC--TGAATTTATTAATTTCTATTTGGATATTAATACTGACATCATATAAATA 226
consensus_9780#4      AATCGAGCCCATATATTAATTAGTTAATGCATGGGCATTGAC----AAATTGGGTAAAGG 89
                       *   *  *  *  *** **** **  *   ***  *** *     * **    ****  

consensus_9780#2      TATATGATGCTTCATATTACTACTATGACGGATAAAGCACCAATTAAAACAAATAAACGT 264
consensus_9780#3      TATATGATGCTTCATATTACTACTATGACGGATAAAGCACCAATTAAAACAAATAAACGT 264
consensus_9780#1      TATATGNNNNNNNNNNNNNNNNNNNNNNNN-ATAAAGCACCAATTAAAACAAATAAACGT 246
consensus_9780#0      TATATGATGCTTCATATTACTACTATGACGGATAAAGCACCAATTAAAACAAATAAACGT 286
consensus_9780#4      GGATTAATCTATTTTTAGGGGACATTTTTGTCTATCGGCCTGTTTTTGTC---TGTAGGC 146
                          *                           **  *  *   **    *   *  * * 

consensus_9780#2      CTACAACAAACTCAAGCTCAAGTTAATGAAGTTGTTGATATTATGCGAGTTA--ATGTTG 322
consensus_9780#3      CTACAACAAACTCAAGCTCAAGTTAATGAAGTTGTTGATATTATGCGAGTTA--ATGTTG 322
consensus_9780#1      CTACAACAAACTCAAGCTCAAGTTAATGAAGTTGTTGATATTATGCGAGTTA--ATGTTG 304
consensus_9780#0      CTACAACAAACTCAAGCTCAAGTTAATGAAGTTGTTGATATTATGCGAGTTA--ATGTTG 344
consensus_9780#4      CTTTAGGGAATTAGGTATGGGGATCATCCAGTTATTCCCGTTATTTATACTACTATGCCA 206
                      **  *   ** *     *   * * **  **** **    ****      **  ***   

consensus_9780#2      AC----AAAGTACTGGAAAGAGATAAAAAT--CTTTCTGAACTTGATGGTCG-AGCCGAT 375
consensus_9780#3      AC----AAAGTACTGGAAAGAGATAAAAAT--CTTTCTGAACTTGATGGTCG-AGCCGAT 375
consensus_9780#1      AC----AAAGTACTGGAAAGAGATAAAAAT--CTTTCTGAACTTGATGGTCN-NNNNNNN 357
consensus_9780#0      AC----AAAGTACTGGAAAGAGATAAAAAT--CTTTCTGAACTTGATGGTCG-AGCCGAT 397
consensus_9780#4      ACTATTAGGACTTTTTATATGATTGAAAATTACTATTTATTTTTGATTTTTTCATCCTTT 266
                      **    *      *  * *    * *****  ** * *    *****  *          

consensus_9780#2      GCGTTGCAAGCTGGTGCTT--CTCAATTCGAAGCTAGTGCTGGTAAACTGAAAAGAAAAT 433
consensus_9780#3      GCGTTGCAAGCTGGTGCTT--CTCAATTCGAAGCTAGTGCTGGTAAACTGAAAAGAAAAT 433
consensus_9780#1      NNNNNNNNNNNNNGTGCTT--CTCAATTCGAAGCTAGTGCTGGTAAACTGAAAAGAAAAT 415
consensus_9780#0      GCGTTGCAAGCTGGTGCTT--CTCAATTCGAAGCTAGTGCTGGTAAACTGAAAAGAAAAT 455
consensus_9780#4      ACTTTAGGAAGTCGTTTTTTCCTTTTTTTTATTTTTATGGGGATTAGCATATGAAACGAA 326
                                   **  **  **   **  *   *  **  * * * *  *  * *  * 

consensus_9780#2      TTTGGTGGAAAAATTGCAAAATGCTAGCCGTATTGGGTGTACTAGTAGTTATTTTAATTA 493
consensus_9780#3      TTTGGTGGAAAAATTGCAAA---------------------------------------- 453
consensus_9780#1      TTTGGTGGAAAAATTGCAAA---------------------------------------- 435
consensus_9780#0      TTTGGTGGAAAAATTGCAAAATGCTAGCCGTATTGGGTGTACTAGTAGTTATTTTAATTA 515
consensus_9780#4      ACAGGAGAAAAAGGCAATATTTGATCATTTTTTTAAGTTGTTCATT-------------- 372
                         ** * ****      *                                         

consensus_9780#2      TCGTATTAATTGTATGGGTCGTTTCTGAACAAAAAAATAAAGTTGAACAAAGTGAACATT 553
consensus_9780#3      ------------TATGGGTCGTTTCTGAACAAAAAAATAAAGTTGAACAAAGTGAACATT 501
consensus_9780#1      ------------TATGGGTCGTTTCTGAACAAAAAAATAAAGTTGAACAAAGTGAACATT 483
consensus_9780#0      TCGTATTAATTGTATGGGTCGTTTCTGAACAAAAAAATAAAGTTGAACAAAGTGAACATT 575
consensus_9780#4      ------------TTGATGTTTTTTATGAAAATGGTGATAAAGTTCCTTGCATTTGTTCGT 420
                                  *    **  *** **** *     ********      * *      *

consensus_9780#2      CATCTCATCATCTTGTGATGGATAACTCATCGCATTTATTATCGGAAC-AGTGATGATGG 612
consensus_9780#3      CATCTCATCATCTTGTGATGGATAACTCATCGCATTTATTATCGGAAC-AGTGATGATGG 560
consensus_9780#1      CATCTCATCATCTTGTGATGGATAACTCATCGCATTTATTATCGGAACCNNNNATGATGG 543
consensus_9780#0      CATCTCATCATCTTGTGATGGATAACTCATCGCATTTATTATCGGAACCAGTGATGATGG 635
consensus_9780#4      TTTACGGTTTGTTTGTTTTCATTTATTCATTTAACTAACTAAAAGGGTTAATATTGCAGT 480
                        *    *    ****  *   * * ****   * * * **   *         **  * 

consensus_9780#2      AGCATCAGAGA------------------------------------------------- 623
consensus_9780#3      AGCATCAGAGA------------------------------------------------- 571
consensus_9780#1      AGCATTCNNGAGAAGGAAAACCAATTTTTCCTGATCATCATATGATAAGTTTGAATGAAA 603
consensus_9780#0      AGCATTCAAGAGAAGGAAAACCAATTTTTCCTGATCATCATATGATAAGTTTGAATGAAA 695
consensus_9780#4      TATAAATTCGATGAC--------------------------------------------- 495
                         *     **                                                 

consensus_9780#2      ------------------------------------------------------------
consensus_9780#3      ------------------------------------------------------------
consensus_9780#1      TAAATACTGAAACGCCATCATCTTTTAATTCTAATAAAATANAATCTAAAGGATTTAAAG 663
consensus_9780#0      TAAATACTGAAACGCCATCATCTTTTAATTCTAATAAAATAAAATCTAAAGGATTTAAAG 755
consensus_9780#4      ------------------------------------------------------------
                                                                                  

consensus_9780#2      ------------------------------------------------------------
consensus_9780#3      ------------------------------------------------------------
consensus_9780#1      AATTACCAT--------------------------------------------------- 672
consensus_9780#0      AATTACCATCACCTCCATCGTCGTTGTCAACTTCTCCTTCTTATTCCCCCTCTTTCTCTT 815
consensus_9780#4      ------------------------------------------------------------
                                                                                  

consensus_9780#2      ------------------------------------------------------------
consensus_9780#3      ------------------------------------------------------------
consensus_9780#1      ------------------------------------------------------------
consensus_9780#0      CGTACCCCTCTTTGTCTCAACATCATTTTGAAAACAATGAAACATCATTGTTTTAATTGG 875
consensus_9780#4      ------------------------------------------------------------
                                                                                  

consensus_9780#2      ------------------------------------------------------------
consensus_9780#3      ------------------------------------------------------------
consensus_9780#1      ------------------------------------------------------------
consensus_9780#0      ATTTTTCTTCATGAATCGATTATTGATTAATCTCCGAACTGTGCCTGGGATCAATTATCA 935
consensus_9780#4      ------------------------------------------------------------
                                                                                  

consensus_9780#2      ------------------------------------------------------------
consensus_9780#3      ------------------------------------------------------------
consensus_9780#1      ------------------------------------------------------------
consensus_9780#0      CTACACACATTCATTTTCATACGTACACCATTGCTGTTAATTGGTGATGGCCAGTGTAAA 995
consensus_9780#4      ------------------------------------------------------------
                                                                                  

consensus_9780#2      ------------------------------------------------------------
consensus_9780#3      ------------------------------------------------------------
consensus_9780#1      ------------------------------------------------------------
consensus_9780#0      CCAAAATAAGTGATATTATTATTTATTTATTTTATGCACATATAAAACAAAAGAGATCAT 1055
consensus_9780#4      ------------------------------------------------------------
                                                                                  

consensus_9780#2      ------------------------------------------------------------
consensus_9780#3      ------------------------------------------------------------
consensus_9780#1      ------------------------------------------------------------
consensus_9780#0      GTAACATTGTTGTTCTCTCTTTCTTGCTCGCTTGTTCACTTGTTTTTTTACTCTGACAAA 1115
consensus_9780#4      ------------------------------------------------------------
                                                                                  

consensus_9780#2      ------------------------------------------------------------
consensus_9780#3      ------------------------------------------------------------
consensus_9780#1      ------------------------------------------------------------
consensus_9780#0      ACTCAGATAATCGAGACCATATATTAATTAGTTAATGCATGTGCATTGACAAATTGTGTA 1175
consensus_9780#4      ------------------------------------------------------------
                                                                                  

consensus_9780#2      ------------------------------------------------------------
consensus_9780#3      ------------------------------------------------------------
consensus_9780#1      ------------------------------------------------------------
consensus_9780#0      ATGTGTATTAATCTATTTTTAGTGTACATTTTTGTCTATCGGCCTGTCTTTGTCTGTATG 1235
consensus_9780#4      ------------------------------------------------------------
                                                                                  

consensus_9780#2      ------------------------------------------------------------
consensus_9780#3      ------------------------------------------------------------
consensus_9780#1      ------------------------------------------------------------
consensus_9780#0      CCTTTATGTAATTATGTATGTGTATCATCCAGTTATTACCGTTATTTATACTACTATGAN 1295
consensus_9780#4      ------------------------------------------------------------
                                                                                  

consensus_9780#2      ------------------------------------------------------------
consensus_9780#3      ------------------------------------------------------------
consensus_9780#1      ------------------------------------------------------------
consensus_9780#0      CACTATTAGTACTTCTTATATGATTGAATATTACTATTTATTTCTGATCTTTTCATCCTT 1355
consensus_9780#4      ------------------------------------------------------------
                                                                                  

consensus_9780#2      ------------------------------------------------------------
consensus_9780#3      ------------------------------------------------------------
consensus_9780#1      ------------------------------------------------------------
consensus_9780#0      TACTCTAGTATGTCGTTTTTTCCTTTTTTCTATTTTTATGTGGATTAGCATATGAAACGA 1415
consensus_9780#4      ------------------------------------------------------------
                                                                                  

consensus_9780#2      ------------------------------------------------------------
consensus_9780#3      ------------------------------------------------------------
consensus_9780#1      ------------------------------------------------------------
consensus_9780#0      AACAGGAGAAAAAGGCAATATTTGATCATTTCTCTAAGTTGTTCATTTTGATGTTCTCTA 1475
consensus_9780#4      ------------------------------------------------------------
                                                                                  

consensus_9780#2      -----------------------------
consensus_9780#3      -----------------------------
consensus_9780#1      -----------------------------
consensus_9780#0      TGATAATGGTGATAAAGTTCCTTGCATTT 1504
consensus_9780#4      -----------------------------