These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9787#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 728 fasta sequence [CAAATCTAATAGAGCGGTACTATGACTGTGGATCGATGTATATACGTTGGGAACATTAATCCAGCAATAACAGCTGATATCTTGTACGNACTTTTTCTCCAGGCTGGGCCTTTGGAAGGTGTTACCGTTAAAGACACATTCGCCTTCGTAACGTTTGAGGATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA-GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGAATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTACGGATAGCATCAAGGCTTTTCAACAGTATATGAACT] [-] EMBL CD178447 [CAAATCTAATAGAGCGGTACTATGACTGTGGATCGATGTATATACGTTGGGAACATTAATCCAGCAATAACAGCTGATATCTTGTACGNACTTTTTCTCCAGGCTGGGCCTTTGGAAGGTGTTACCGTTAAAGACACATTCGCCTTCGTAACGTTTGAGGATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACATTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACC ] [+] EMBL CD200976 [ GGTGTTACCGTTAAAGACACATTCGCCTTCGTAACGTTTGAGGATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGAATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTGCGGATAGCATCAAGGCTTTTCAACAGTATA ] [+] EMBL CD200927 [ GGTGTTACCGTTAAAGACACATTCGCCTTCGTAACGTTTGAGGATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGANAACCGTTT ] [+] EMBL CD179076 [ TAAAGACACATTCGCCTTCGTAACGTTTGAGGATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTAC ] [+] EMBL CD137328 [ GATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGAATACAGTAGACACATGAGCTCAGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTACGGATAGCATCAAGGCTT ] [-] EMBL CD195366 [ ATATGCTTGCTCNC TTTGAAAGGGATCACCTTATACGGTACGGANCTGA NATCCGTNCAAGACANAACTNTAAG TTCAGGGATCTAAAGATACGTTCTGTCCCACCTTCTGCCTACCAG TTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCAACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGGATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTACGGATAGCATCAAGGCTTTTCAACAGTATATGAAC ] [+] EMBL CD178966 [ ATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACCCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTAC ] [-] EMBL CD194940 [ TGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGTCAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAA ] [-] EMBL CD179813 [ ATCTGTCCAAGAC AAACTTGTAGTTGCA GGATCTATAGATACGTTNTGTTCGACAGTTTGCTTACACGTTTTCAAGGCCTGTAGTTGACCATTATTATTCAGCACCAAGTCACTGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCTTGAGTTTTACTCCACATGCGGGTACCCGACATTTGGCTCATGAAATTGCATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCAGTATGGTAGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAATAAGACGGTCTAATGAATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTACGGATAGCATCAAGGCTTCTCAACAGTATATGAACT] [+] EMBL CD188224 [ CCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGAATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACT ] [-] EMBL CD198609 [ TTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGAATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTACGGATAGCATCAAGGCTTTTCAACAGT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||