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Schistosoma mansoni
cluster # 9787 cluster # 9787       Sequences # 11       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9787#0 length = 728 sequences # 11  

consensusID : consensus_9787#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 728
fasta sequence
                              [CAAATCTAATAGAGCGGTACTATGACTGTGGATCGATGTATATACGTTGGGAACATTAATCCAGCAATAACAGCTGATATCTTGTACGNACTTTTTCTCCAGGCTGGGCCTTTGGAAGGTGTTACCGTTAAAGACACATTCGCCTTCGTAACGTTTGAGGATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA-GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGAATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTACGGATAGCATCAAGGCTTTTCAACAGTATATGAACT]

[-] EMBL CD178447             [CAAATCTAATAGAGCGGTACTATGACTGTGGATCGATGTATATACGTTGGGAACATTAATCCAGCAATAACAGCTGATATCTTGTACGNACTTTTTCTCCAGGCTGGGCCTTTGGAAGGTGTTACCGTTAAAGACACATTCGCCTTCGTAACGTTTGAGGATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACATTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACC                                                                                                                                                                                                                                    ]
[+] EMBL CD200976             [                                                                                                                     GGTGTTACCGTTAAAGACACATTCGCCTTCGTAACGTTTGAGGATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGAATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTGCGGATAGCATCAAGGCTTTTCAACAGTATA      ]
[+] EMBL CD200927             [                                                                                                                     GGTGTTACCGTTAAAGACACATTCGCCTTCGTAACGTTTGAGGATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGANAACCGTTT                                                                                                                                                                     ]
[+] EMBL CD179076             [                                                                                                                                TAAAGACACATTCGCCTTCGTAACGTTTGAGGATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTAC                                                                                                                                                                                                                                     ]
[+] EMBL CD137328             [                                                                                                                                                               GATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGAATACAGTAGACACATGAGCTCAGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTACGGATAGCATCAAGGCTT                  ]
[-] EMBL CD195366             [                                                                                                                                                                                ATATGCTTGCTCNC TTTGAAAGGGATCACCTTATACGGTACGGANCTGA NATCCGTNCAAGACANAACTNTAAG TTCAGGGATCTAAAGATACGTTCTGTCCCACCTTCTGCCTACCAG TTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCAACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGGATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTACGGATAGCATCAAGGCTTTTCAACAGTATATGAAC ]
[+] EMBL CD178966             [                                                                                                                                                                                ATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACCCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTAC                                                                                                                                                                                                                                     ]
[-] EMBL CD194940             [                                                                                                                                                                                   TGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGTCAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAA                                                                                                                                                                                                                                                   ]
[-] EMBL CD179813             [                                                                                                                                                                                                                                    ATCTGTCCAAGAC AAACTTGTAGTTGCA GGATCTATAGATACGTTNTGTTCGACAGTTTGCTTACACGTTTTCAAGGCCTGTAGTTGACCATTATTATTCAGCACCAAGTCACTGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCTTGAGTTTTACTCCACATGCGGGTACCCGACATTTGGCTCATGAAATTGCATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCAGTATGGTAGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAATAAGACGGTCTAATGAATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTACGGATAGCATCAAGGCTTCTCAACAGTATATGAACT]
[+] EMBL CD188224             [                                                                                                                                                                                                                                          CCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGAATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACT                                                                                  ]
[-] EMBL CD198609             [                                                                                                                                                                                                                                                                                                          TTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGAATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTACGGATAGCATCAAGGCTTTTCAACAGT         ]


>consensus_9787#0 CAAATCTAATAGAGCGGTACTATGACTGTGGATCGATGTATATACGTTGGGAACATTAAT CCAGCAATAACAGCTGATATCTTGTACGNACTTTTTCTCCAGGCTGGGCCTTTGGAAGGT GTTACCGTTAAAGACACATTCGCCTTCGTAACGTTTGAGGATGAAGAGTCTGTCCCATAT GCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGA CAAAACTCTAAGTTTCAGGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTT TTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAG AGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCA CCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAA CATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCT CCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGAATACAGTAGACAC ATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGT TCCAGACCTGACAGTTCTTATAATAATCGGTACGGATAGCATCAAGGCTTTTCAACAGTA TATGAACT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)