cluster # 9790

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Schistosoma mansoni
cluster # 9790 cluster # 9790 Sequences # 11 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9790#0 length = 1322 sequences # 5
consensus_9790#1 length = 662 sequences # 2
consensus_9790#2 length = 417 sequences # 1

consensus_9790#3 length = 410 sequences # 1
consensus_9790#4 length = 346 sequences # 1
consensus_9790#5 length = 205 sequences # 1

consensusID : consensus_9790#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1322
fasta sequence

                              [GAGTTATCACTGAAAGTTGGGTTTCAGCACTACCTGGCAAATAGTTCCTGTTTGTGTTTGTGAAACGTGACCTCAGAGCAGAAAAGACTACGCTCTTATATGCTTAGTCACCATTTTCCTTAGAGGGTTAGCCTCATTCTATAGCGAATCAAACCGCCCACCAAGCAGTGCGTTCTTGAAATATTGAACCCGATTGACTTAAATCGTTTGTAAGTGTTGTCTAAGGATCTGTGATGCAGATCACTATTTGTCGTCATTTAGAGTGACTTGTAAGAGAGGACAGTACTTGTTAAATATTCACCCTTTATTTGGACTTAAGTGACTCATTGACATTTTATCAAGCATGACTCACATGCGAACCCATACCATTTGCAATTAATTTTGTGTTTTGCGTAAAATGTATTTGAGACACAATTTTAGTTATTAAAAAGATAAGAAGTCGATATGACCACACTTGATTTACCATTATCTCCAAATTCTTGAGACGCTAAATGTTAATGGATTCTTTAAATCTTTTTATGATATCTTAAAAGTACGGATGAGTATCAAGAAAAGTTATCTGGGAATATACAATGGATTTCAGCTAATGGGGTTTGTCCGGATGTAATATGTCAATAGTTTATAGATGGGGTTATATACTTTCTTTGTACATACTTGAGTCATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGTTCCAATCTCTAGCTGTCGTTGAGATAATCCATTCTGCAGTAGGATTAGTTAGATCTTCCGTCATGACAACCATGTTGCAGGTATCCTCCCGACTACTAGTTGTGTGGGGAATTTTATATATGGTCCCGGAAGTTGCACGTGATAATTTGGGTGTCCCACTCATTGTTATATCGTGGTCTATTGCTGAAATGATTCGTTATTCATATTATGTGGCAGATATATGTAGGGTAAAGTTAAATTTGCTAACTTGGTTGAGGTGAGGAAAATTTTTAATTCATTTACTTCGAAAGGTACTCAGGCTTTATGATTTTGTATCCAACTGGGATTTCTGGTGAGGTTCTTCTAATAGTAAGTGGCTTAACGAGACTGAGGGAAACAGAACAATATTCCTTCGATCTTCCAAATGCTTTAAATTGTTCACTCAGTTATTGGTTTGCTTTCGCTGCTATACTTATAACCTACATTCCAGGTTCAAAGACAATGTACACTCACATGATGCGTCAAAGAAAGAAAGTTTTACAAAATTGTAACTAAGGAGCAGTTGTTATTTTTTCATCGTATGAATAATCTAACTTATTTATAAATGTTTACTAAGTATCAAC]

[+] EMBL CD190598             [GAGTTATCACTGAAAGTTGGGTTTCAGCACTACCTGGCAAATAGTTCCTGTTTGTGTTTGTGAAACGTGACCTCAGAGCAGAAAAGACTACGCTCTTATATGCTTAGTCACCATTTTCCTTAGAGGGTTAGCCTCATTCTATAGCGAATCAAACCGCCCACCAAGCAGTGCGTTCTTGAAATATTGAACCCGATTGACTTAAATCGTTTGTAAGTGTTGTCTAAGGATCTGTGATGCAGATCACTATTTGTCGTCATTTAGAGTGACTTGTAAGAGAGGACAGTACTTGTTAAATATTCACCCTTTATTTGGACTTAAGTGACTCATTGACATTTTATCAAGCATGACTCACATGCGAACCCATACCATTTGCAATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD082528             [                                                                                          CGCTCTTATATGCTTAGTCACCATTTTCCTTAGAGGATTAGCCTCATTCTATAGCGAATCAAACCGCCCACCAAGCAGTGCGTTCTTGAAATATTGAACCCGATTGACTTAAATCGTTTGTAAGTGTTGTCTAAGGATCTGTGATGCAGATCACTATTTGTCGTCATTTAGAGTGACTTGTAAGAGAGGACAGTACTTGTTAAATATTCACCCTTTATTTGGACTTAAGTGACTCATTGACATTTTATCAAGCATGACTCACATGCGAACCCATACCATTTGCAAGTAATTTTGTGTTTTGCGTAAAATGTATTTGAGACACAATTTTAGTTATTAAAAAGATAAGAAGTCGATATGACCACACTTGATTTACCATTATCTCCAAATTCTTGAGACGCTAAATGTTAATGGATTCTTTAAATCTTTTTATGATATCTTAAAAGTACGGATGAGTATCAAGAAAAGTTATCTGGGAATATACAATGGATTTCAGCTAATGGGGTTTGTCCGGATGTAATATGTCAATAGTTTATAGATGGGGTTATATACTTTCTTTGTACATACTTGAGTCATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGTTCCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD178312             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTATATACTTTCTTTGTACATACTTGAGTCATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGTTCCAATCTCTAGCTGTCGTTGAGATAATCCATTCTGCAGTAGGATTAGTTAGATCTTCCGTCATGACAACCATGTTGCAGGTATCCTCCCGACTACTAGTTGTGTGGGGAATTTTATATATGGTCCCGGAAGTTGCACGTGATAATTTGGGTGTCCCACTCATTGTTATATCGTGGTCTATTGCTGAAATGATTCGTTATTCATATTATGTGGCAGATATATGTAGGGTAAAGTTAAATTTGCTAACTTGGTTGAGGTGAGGAAAATTTTTAATTCATTTACTTCGAAAGGTACTCAGGCTTTATGATTTTGTATCCAACTGGGATTTCTGGTGAGGTTCTTCTAATAGTAAGTGGCTTAACGAGACTGAGGGAAACA                                                                                                                                                                                                                                ]
[-] EMBL CD076123             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TACGCCTGTTCCAATCTCTAGCTGTCGTTGAGATAATCCATTCTGCAGTAGGATTAGTTAGATCTTCCGTCATGACAACCATGTTGCAGGTATCCTCCCGACTACTAGTTGTGTGGGGAATTTTATATATGGTCCCGGAAGTTGCACGTGATAATTTGGGTGTCCCACTCATTGTTATAT TTGGTCTATTGCTGAAATGATTCGTTATTCATATTATGTGGCAGATATATGTAGGGTAAAGTTAAATTTGCTAACTTGGTTGAGGTGAGGAAAATTTTTAATTCATTTACTTCGAAAGGTACTCAGGCTTTATGATTTTGTATCCAACTGGGATTTCTGGTGAGGTTCTTCTAATAGTAAGTGGCATAAAAAGACTGAGGGAAACAGAACAATATTCCTTCGATCTTCCAAATGCTTTAAATTGTTCACTCAGTTATTGGTTTGCTTTCGCTGCTATACTTATAACCTACATTCCAGGTTCAAAGACAATGTACACTCACATGATGCGTCAAAGAAAGAAAGTTTTACAAAATTGTAACTAAGGAGCAGTTGTTATTTTTTCATCGTATGAATAATCTAACTTATTTATAAATGTTTACTAAGTATCAAC]
[-] EMBL CD135099             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CATTCTGCAGTAGGATTAGTTAGATCTTCCGTCATGACAACCATGTTGCAGGTATCCTCCCGACTACTAGTTGTGTGGGGAATTTTATATATGGTCCCGGAAGTTGCACGTGATAATTTGGGTGTCCCACTCATTGTTATATCGTGGTCTATTGCTGAAATGATTCGTTATTCATATTATGTGGCAGATATATGTAGGGTAAAGTTAAATTT                                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_9790#0
GAGTTATCACTGAAAGTTGGGTTTCAGCACTACCTGGCAAATAGTTCCTGTTTGTGTTTG
TGAAACGTGACCTCAGAGCAGAAAAGACTACGCTCTTATATGCTTAGTCACCATTTTCCT
TAGAGGGTTAGCCTCATTCTATAGCGAATCAAACCGCCCACCAAGCAGTGCGTTCTTGAA
ATATTGAACCCGATTGACTTAAATCGTTTGTAAGTGTTGTCTAAGGATCTGTGATGCAGA
TCACTATTTGTCGTCATTTAGAGTGACTTGTAAGAGAGGACAGTACTTGTTAAATATTCA
CCCTTTATTTGGACTTAAGTGACTCATTGACATTTTATCAAGCATGACTCACATGCGAAC
CCATACCATTTGCAATTAATTTTGTGTTTTGCGTAAAATGTATTTGAGACACAATTTTAG
TTATTAAAAAGATAAGAAGTCGATATGACCACACTTGATTTACCATTATCTCCAAATTCT
TGAGACGCTAAATGTTAATGGATTCTTTAAATCTTTTTATGATATCTTAAAAGTACGGAT
GAGTATCAAGAAAAGTTATCTGGGAATATACAATGGATTTCAGCTAATGGGGTTTGTCCG
GATGTAATATGTCAATAGTTTATAGATGGGGTTATATACTTTCTTTGTACATACTTGAGT
CATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGT
TCCAATCTCTAGCTGTCGTTGAGATAATCCATTCTGCAGTAGGATTAGTTAGATCTTCCG
TCATGACAACCATGTTGCAGGTATCCTCCCGACTACTAGTTGTGTGGGGAATTTTATATA
TGGTCCCGGAAGTTGCACGTGATAATTTGGGTGTCCCACTCATTGTTATATCGTGGTCTA
TTGCTGAAATGATTCGTTATTCATATTATGTGGCAGATATATGTAGGGTAAAGTTAAATT
TGCTAACTTGGTTGAGGTGAGGAAAATTTTTAATTCATTTACTTCGAAAGGTACTCAGGC
TTTATGATTTTGTATCCAACTGGGATTTCTGGTGAGGTTCTTCTAATAGTAAGTGGCTTA
ACGAGACTGAGGGAAACAGAACAATATTCCTTCGATCTTCCAAATGCTTTAAATTGTTCA
CTCAGTTATTGGTTTGCTTTCGCTGCTATACTTATAACCTACATTCCAGGTTCAAAGACA
ATGTACACTCACATGATGCGTCAAAGAAAGAAAGTTTTACAAAATTGTAACTAAGGAGCA
GTTGTTATTTTTTCATCGTATGAATAATCTAACTTATTTATAAATGTTTACTAAGTATCA
AC

consensusID : consensus_9790#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 662
fasta sequence

                              [CCGAGGCCAAGAATCGGCACGAGGCGGATGAGTATCAAGAAAAGTTATCTGGGAATATACAATGGATTTCAGCTAATGGGATGGGGTTATATACTTTCTTTGTACATACTTGAGTCATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGTTCCAATCTCTAGCTGTCGTTGAGATAATCCATTCTGCAGTAGGATTAGTTAGATCTTCCGTCATGACAACCATGTTGCAGGTATCCTCCCGACTACTAGTTGTGTGGGGAATTTTATATATTGTCCCGGAAGTTGCACGTGATAATTTGGGTGTCCCACTCATTGTTATATCGTGGTCTATTGCTGAAATGATTCGTTATTCATATTATGTGGCAGATATATGTAGGGTAAAGTTAAATTTGCTAACTTGGTTGAGGTACTCAGGCTTTATGATTTTGTATCCAACTGGGATTTCTGGTGAGGTTCTTCTAATAGTAAGTGGCATAAAAAGACTGAGGGAAACAGAACAATATTCCTTCGATCTTCCAAATGCTTTAAATTGTTCACTCAGTTATTGGTTTGCTTTCGCTGCTATACTTATAACCTACATTCCAGGTTCAAAGACAATGTACACTCACATGATGCGTCAAAGAAAGAAAGTTTTACA]

[+] EMBL CD083860             [CCGAGGCCAAGAATCGGCACGAGGCGGATGAGTATCAAGAAAAGTTATCTGGGAATATACAATGGATTTCAGCTAATGGGATGGGGTTATATACTTTCTTTGTACATACTTGAGTCATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGTTCCAATCTCTAGCTGTCGTTGAGATAATCCATTCTGCAGTAGGATTAGTTAGATCTTCCGTCATGACAACCATGTTGCAGGTATCCTCCCGACTACTAGTTGTGTGGGGAATTTTATATATTGTCCCGGAAGTTGCACGTGATAATTTGGGTGTCCCACTCATTGTTATATCGTGGTCTATTGCTGAAATGATTCGTTATTCATATTATGTGGCAGATATATGTAGGGTAAAGTTAAATTTGCTAACTTGGTTGAGGT                                                                                                                                                                                                                                     ]
[+] EMBL CD062100             [                                                                                                                                                                                                                                                                  TCCTCCCGACTACTAGTTGTGTGGGGAATTTTATATATGGTCCCGGAAGTTGCACGTGATAATTTGGGTGTCCCACTCATTGTTATATCGTGGTCTATTGCTGAAATGATTCGTTATTCATATTATGTGGCAGATATATGTAGGGTAAAGTTAAATTTGCTAACTTGGTCGAGGTACTCAGGCTTTATGATTTTGTATCCAACTGGGATTTCTGGTGAGGTTCTTCTAATAGTAAGTGGCATAAAAAGACTGAGGGAAACAGAACAATATTCCTTCGATCTTCCAAATGCTTTAAATTGTTCACTCAGTTATTGGTTTGCTTTCGCTGCTATACTTATAACCTACATTCCAGGTTCAAAGACAATGTACACTCACATGATGCGTCAAAGAAAGAAAGTTTTACA]




>consensus_9790#1
CCGAGGCCAAGAATCGGCACGAGGCGGATGAGTATCAAGAAAAGTTATCTGGGAATATAC
AATGGATTTCAGCTAATGGGATGGGGTTATATACTTTCTTTGTACATACTTGAGTCATCC
TTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGTTCCAA
TCTCTAGCTGTCGTTGAGATAATCCATTCTGCAGTAGGATTAGTTAGATCTTCCGTCATG
ACAACCATGTTGCAGGTATCCTCCCGACTACTAGTTGTGTGGGGAATTTTATATATTGTC
CCGGAAGTTGCACGTGATAATTTGGGTGTCCCACTCATTGTTATATCGTGGTCTATTGCT
GAAATGATTCGTTATTCATATTATGTGGCAGATATATGTAGGGTAAAGTTAAATTTGCTA
ACTTGGTTGAGGTACTCAGGCTTTATGATTTTGTATCCAACTGGGATTTCTGGTGAGGTT
CTTCTAATAGTAAGTGGCATAAAAAGACTGAGGGAAACAGAACAATATTCCTTCGATCTT
CCAAATGCTTTAAATTGTTCACTCAGTTATTGGTTTGCTTTCGCTGCTATACTTATAACC
TACATTCCAGGTTCAAAGACAATGTACACTCACATGATGCGTCAAAGAAAGAAAGTTTTA
CA

consensusID : consensus_9790#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 417
fasta sequence

                              [AAGGTTGGAAGCAATAATATCGCTAGTACGGATGAGTATCAAGAAAAGTTATATGGGAATATACAATGGATTTCAGCTAATGGGGTTTGTCCGGATGTAATATGTCAATAGTTTATAGATGGGGTTATATACTTTCTTTGTACATACTTGAGTCATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGTTCCAATCTCTAGCTGTCGTTGAGATAATCCATTCTGCAGTAGGATTAGTTAGATCTTCCGTCATGACAACCATGTTGCAGGTATCCTCCCGACTACTAGTTGTGTGGGGAATTTTATATATGGTCCCGGAAGTTGCACGTGATAATTTGGGTGTCCCACTCATTGTTATATCGTGGTCTATTGCTGAAATGATTCGTTATTCAT]

[-] EMBL CD190076             [AAGGTTGGAAGCAATAATATCGCTAGTACGGATGAGTATCAAGAAAAGTTATATGGGAATATACAATGGATTTCAGCTAATGGGGTTTGTCCGGATGTAATATGTCAATAGTTTATAGATGGGGTTATATACTTTCTTTGTACATACTTGAGTCATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGTTCCAATCTCTAGCTGTCGTTGAGATAATCCATTCTGCAGTAGGATTAGTTAGATCTTCCGTCATGACAACCATGTTGCAGGTATCCTCCCGACTACTAGTTGTGTGGGGAATTTTATATATGGTCCCGGAAGTTGCACGTGATAATTTGGGTGTCCCACTCATTGTTATATCGTGGTCTATTGCTGAAATGATTCGTTATTCAT]




>consensus_9790#2
AAGGTTGGAAGCAATAATATCGCTAGTACGGATGAGTATCAAGAAAAGTTATATGGGAAT
ATACAATGGATTTCAGCTAATGGGGTTTGTCCGGATGTAATATGTCAATAGTTTATAGAT
GGGGTTATATACTTTCTTTGTACATACTTGAGTCATCCTTCAAAAGAAAGTGGTTTGAGT
TAAGCGTTCAAGTAGATATTTTTCTACGCCTGTTCCAATCTCTAGCTGTCGTTGAGATAA
TCCATTCTGCAGTAGGATTAGTTAGATCTTCCGTCATGACAACCATGTTGCAGGTATCCT
CCCGACTACTAGTTGTGTGGGGAATTTTATATATGGTCCCGGAAGTTGCACGTGATAATT
TGGGTGTCCCACTCATTGTTATATCGTGGTCTATTGCTGAAATGATTCGTTATTCAT

consensusID : consensus_9790#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 410
fasta sequence

                              [ACTGCGGAAGCACAGCGCTCAGGCAAACTCAAGGTTGGAAGCAATAATATCGCTAGTACGGATGAGTATCAAGAAAAGTTATCTGGGAATATACAATGGATTTCAGCTAATGGGATGGGGTTATATACTTTCTTTGTACATACTTGAGTCATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGTTCCAATCTCTAGCTGTCGTTGAGATAATCCATTCTGCAGTAGGATTAGTTAGATCTTCCGTCATGACAACCATGTTGCAGGTATCCTCCCGACTACTAGTTGTGTGGGGAATTTTATATATGGTCCCGGAAGTTGCACGTGATAATTTGGGTGTCCCACTCATTGTTATATCGTGGTCTATTGCTGAAATGATTCGTTATT]

[+] EMBL CD068196             [ACTGCGGAAGCACAGCGCTCAGGCAAACTCAAGGTTGGAAGCAATAATATCGCTAGTACGGATGAGTATCAAGAAAAGTTATCTGGGAATATACAATGGATTTCAGCTAATGGGATGGGGTTATATACTTTCTTTGTACATACTTGAGTCATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGTTCCAATCTCTAGCTGTCGTTGAGATAATCCATTCTGCAGTAGGATTAGTTAGATCTTCCGTCATGACAACCATGTTGCAGGTATCCTCCCGACTACTAGTTGTGTGGGGAATTTTATATATGGTCCCGGAAGTTGCACGTGATAATTTGGGTGTCCCACTCATTGTTATATCGTGGTCTATTGCTGAAATGATTCGTTATT]




>consensus_9790#3
ACTGCGGAAGCACAGCGCTCAGGCAAACTCAAGGTTGGAAGCAATAATATCGCTAGTACG
GATGAGTATCAAGAAAAGTTATCTGGGAATATACAATGGATTTCAGCTAATGGGATGGGG
TTATATACTTTCTTTGTACATACTTGAGTCATCCTTCAAAAGAAAGTGGTTTGAGTTAAG
CGTTCAAGTAGATATTTTTCTACGCCTGTTCCAATCTCTAGCTGTCGTTGAGATAATCCA
TTCTGCAGTAGGATTAGTTAGATCTTCCGTCATGACAACCATGTTGCAGGTATCCTCCCG
ACTACTAGTTGTGTGGGGAATTTTATATATGGTCCCGGAAGTTGCACGTGATAATTTGGG
TGTCCCACTCATTGTTATATCGTGGTCTATTGCTGAAATGATTCGTTATT

consensusID : consensus_9790#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 346
fasta sequence

                              [GCCAGGTAGTGCTGAAACCCAACTTTCAGTGATAACTCGTCAAAAGCAGTGAAGCATCTCAGACACAATTTGATCACTATTTTTCGGGAAGATCGATTAAAAAGCAAGCTACCTGTTTTCATCATATACCCTTACAGATGACTGGAAAGCACTTTGGTGCTACCGGAAGTAGCAATTAACTAACATTCCAGAAATATCAGGAGACGGCTGTCTTTATAATTACATAATCACCAAATTTTTTTTAGAGAAGTTCGGTGAAGAATTCTTCTCGGACAGACGTAGTGAGATTTGTATCACTAATACTATTTAGTATTTAGAAAGAAAATGTGAATGTACACAGCTAGAA]

[+] EMBL CD140523             [GCCAGGTAGTGCTGAAACCCAACTTTCAGTGATAACTCGTCAAAAGCAGTGAAGCATCTCAGACACAATTTGATCACTATTTTTCGGGAAGATCGATTAAAAAGCAAGCTACCTGTTTTCATCATATACCCTTACAGATGACTGGAAAGCACTTTGGTGCTACCGGAAGTAGCAATTAACTAACATTCCAGAAATATCAGGAGACGGCTGTCTTTATAATTACATAATCACCAAATTTTTTTTAGAGAAGTTCGGTGAAGAATTCTTCTCGGACAGACGTAGTGAGATTTGTATCACTAATACTATTTAGTATTTAGAAAGAAAATGTGAATGTACACAGCTAGAA]




>consensus_9790#4
GCCAGGTAGTGCTGAAACCCAACTTTCAGTGATAACTCGTCAAAAGCAGTGAAGCATCTC
AGACACAATTTGATCACTATTTTTCGGGAAGATCGATTAAAAAGCAAGCTACCTGTTTTC
ATCATATACCCTTACAGATGACTGGAAAGCACTTTGGTGCTACCGGAAGTAGCAATTAAC
TAACATTCCAGAAATATCAGGAGACGGCTGTCTTTATAATTACATAATCACCAAATTTTT
TTTAGAGAAGTTCGGTGAAGAATTCTTCTCGGACAGACGTAGTGAGATTTGTATCACTAA
TACTATTTAGTATTTAGAAAGAAAATGTGAATGTACACAGCTAGAA

consensusID : consensus_9790#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 205
fasta sequence

                              [AATACTGCCGGAAGCACAGTGCTCAGGCAAACTCAATGTACGGATGAGTATCAAGAAAAGTTATCTGGGAATATACAATGGATTTCAGCTAATGGGATGGGGTTATATACTTTCTTTGTACATACTTGAGTCATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGTTCCAATCTCTAGCT]

[+] EMBL CD068335             [AATACTGCCGGAAGCACAGTGCTCAGGCAAACTCAATGTACGGATGAGTATCAAGAAAAGTTATCTGGGAATATACAATGGATTTCAGCTAATGGGATGGGGTTATATACTTTCTTTGTACATACTTGAGTCATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGTTCCAATCTCTAGCT]




>consensus_9790#5
AATACTGCCGGAAGCACAGTGCTCAGGCAAACTCAATGTACGGATGAGTATCAAGAAAAG
TTATCTGGGAATATACAATGGATTTCAGCTAATGGGATGGGGTTATATACTTTCTTTGTA
CATACTTGAGTCATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTT
TCTACGCCTGTTCCAATCTCTAGCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9790#0      GAGTTATCACTGAAAGTTGGGTTTCAGCACTACCTGGCAAATAGTTCCTGTTTGTGTTTG 60
consensus_9790#1      ------------------------------------------------------------
consensus_9790#2      ------------------------------------------------------------
consensus_9790#3      ------------------------------------------------------------
consensus_9790#5      ------------------------------------------------------------
consensus_9790#4      ------------------------------------------------------------
                                                                                  

consensus_9790#0      TGAAACGTGACCTCAGAGCAGAAAAGACTACGCTCTTATATGCTTAGTCACCATTTTCCT 120
consensus_9790#1      ------------------------------------------------------------
consensus_9790#2      ------------------------------------------------------------
consensus_9790#3      ------------------------------------------------------------
consensus_9790#5      ------------------------------------------------------------
consensus_9790#4      ------------------------------------------------------------
                                                                                  

consensus_9790#0      TAGAGGGTTAGCCTCATTCTATAGCGAATCAAACCGCCCACCAAGCAGTGCGTTCTTGAA 180
consensus_9790#1      ------------------------------------------------------------
consensus_9790#2      ------------------------------------------------------------
consensus_9790#3      ------------------------------------------------------------
consensus_9790#5      ------------------------------------------------------------
consensus_9790#4      ------------------------------------------------------------
                                                                                  

consensus_9790#0      ATATTGAACCCGATTGACTTAAATCGTTTGTAAGTGTTGTCTAAGGATCTGTGATGCAGA 240
consensus_9790#1      ------------------------------------------------------------
consensus_9790#2      ------------------------------------------------------------
consensus_9790#3      ------------------------------------------------------------
consensus_9790#5      ------------------------------------------------------------
consensus_9790#4      ------------------------------------------------------------
                                                                                  

consensus_9790#0      TCACTATTTGTCGTCATTTAGAGTGACTTGTAAGAGAGGACAGTACTTGTTAAATATTCA 300
consensus_9790#1      ------------------------------------------------------------
consensus_9790#2      ------------------------------------------------------------
consensus_9790#3      ------------------------------------------------------------
consensus_9790#5      ------------------------------------------------------------
consensus_9790#4      ------------------------------------------------------------
                                                                                  

consensus_9790#0      CCCTTTATTTGGACTTAAGTGACTCATTGACATTTTATCAAGCATGACTCACATGCGAAC 360
consensus_9790#1      ------------------------------------------------------------
consensus_9790#2      ------------------------------------------------------------
consensus_9790#3      ------------------------------------------------------------
consensus_9790#5      ------------------------------------------------------------
consensus_9790#4      ------------------------------------------------------------
                                                                                  

consensus_9790#0      CCATACCATTTGCAATTAATTTTGTGTTTTGCGTAAAATGTATTTGAGACACAATTTTAG 420
consensus_9790#1      ------------------------------------------------------------
consensus_9790#2      ------------------------------------------------------------
consensus_9790#3      ------------------------------------------------------------
consensus_9790#5      ------------------------------------------------------------
consensus_9790#4      ------------------------------------------------------------
                                                                                  

consensus_9790#0      TTATTAAAAAGATAAGAAGTCGATATGACCACACTTGATTTACCATTATCTCCAAATTCT 480
consensus_9790#1      ------------------------------------------------------------
consensus_9790#2      ------------------------------------------------------------
consensus_9790#3      --------------------------------------------------------ACTG 4
consensus_9790#5      -----------------------------------------------------AATACTG 7
consensus_9790#4      ------------------------------------------------------------
                                                                                  

consensus_9790#0      TGAGACGCTAAATGTTAATGGATTCTTTAAATCTTTTTATGATATCTTAAAAGTACGGAT 540
consensus_9790#1      -------------------------------CCGAGGCCAAGAATCGGCACGAGGCGGAT 29
consensus_9790#2      ---------------------------AAGGTTGGAAGCAATAATATCGCTAGTACGGAT 33
consensus_9790#3      C-GGAAGCACAGCGCTCAGGCAAACTCAAGGTTGGAAGCAATAATATCGCTAGTACGGAT 63
consensus_9790#5      CCGGAAGCACAGTGCTCAGGCAAACTCAATGT----------------------ACGGAT 45
consensus_9790#4      ------GCCAGGTAGTGCTG-AAACCCAACTTTCAGTGATAACTCGTCAAAAGCAGTGAA 53
                                                                               ** 

consensus_9790#0      GAGTATCAAGAAAAGTTATCTGGGAATATACAATGGATTTCAGCTAATGGGGTTTGTCCG 600
consensus_9790#1      GAGTATCAAGAAAAGTTATCTGGGAATATACAATGGATTTCAGCTAATGGG--------- 80
consensus_9790#2      GAGTATCAAGAAAAGTTATATGGGAATATACAATGGATTTCAGCTAATGGGGTTTGTCCG 93
consensus_9790#3      GAGTATCAAGAAAAGTTATCTGGGAATATACAATGGATTTCAGCTAATGGG--------- 114
consensus_9790#5      GAGTATCAAGAAAAGTTATCTGGGAATATACAATGGATTTCAGCTAATGGG--------- 96
consensus_9790#4      GCATCTCAGACACAATTTGATCACTATTTTTCGGGAAGATCGATTAAAAAG--------- 104
                      *  * ***   * * **   *    ** *     * *  **   ***   *         

consensus_9790#0      GATGTAATATGTCAATAGTTTATAGATGGGGTTATATACTTTCTTTGTACATACTTGAGT 660
consensus_9790#1      -------------------------ATGGGGTTATATACTTTCTTTGTACATACTTGAGT 115
consensus_9790#2      GATGTAATATGTCAATAGTTTATAGATGGGGTTATATACTTTCTTTGTACATACTTGAGT 153
consensus_9790#3      -------------------------ATGGGGTTATATACTTTCTTTGTACATACTTGAGT 149
consensus_9790#5      -------------------------ATGGGGTTATATACTTTCTTTGTACATACTTGAGT 131
consensus_9790#4      ---------------------------CAAGCTACCTGTTTTCATCATATACCCTTACAG 137
                                                    * **  *  **** *  ** *  ***    

consensus_9790#0      CATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGT 720
consensus_9790#1      CATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGT 175
consensus_9790#2      CATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGT 213
consensus_9790#3      CATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGT 209
consensus_9790#5      CATCCTTCAAAAGAAAGTGGTTTGAGTTAAGCGTTCAAGTAGATATTTTTCTACGCCTGT 191
consensus_9790#4      ATGACTGGAAAGCACTTTGGTGCTACCGGAAGTAGCAATTAACTAACATTCCAGAAATAT 197
                          **  ***  *   ****   *    *     *** **  **   *** *    * *

consensus_9790#0      TCCAATCTCTAGCTGTCGTTGAGATAATCCATTCTGCAGTAGGATTAGTTAGATCTTCCG 780
consensus_9790#1      TCCAATCTCTAGCTGTCGTTGAGATAATCCATTCTGCAGTAGGATTAGTTAGATCTTCCG 235
consensus_9790#2      TCCAATCTCTAGCTGTCGTTGAGATAATCCATTCTGCAGTAGGATTAGTTAGATCTTCCG 273
consensus_9790#3      TCCAATCTCTAGCTGTCGTTGAGATAATCCATTCTGCAGTAGGATTAGTTAGATCTTCCG 269
consensus_9790#5      TCCAATCTCTAGCT---------------------------------------------- 205
consensus_9790#4      --CAGGAGACGGCTGTCTTTATAATTACATAATCACCAAATTTTTTTTAGAGAAGTTCGG 255
                        **       ***                                              

consensus_9790#0      TCATGACAACCATGTTGCAGGTATCCTCCCGACTACTAGTTGTGTGGGGAATTTTATATA 840
consensus_9790#1      TCATGACAACCATGTTGCAGGTATCCTCCCGACTACTAGTTGTGTGGGGAATTTTATATA 295
consensus_9790#2      TCATGACAACCATGTTGCAGGTATCCTCCCGACTACTAGTTGTGTGGGGAATTTTATATA 333
consensus_9790#3      TCATGACAACCATGTTGCAGGTATCCTCCCGACTACTAGTTGTGTGGGGAATTTTATATA 329
consensus_9790#5      ------------------------------------------------------------
consensus_9790#4      TGAAGA-ATTCTTCTCGGACAGACGTAGTGAGATTTGTATCACTAATACTATTTAGTATT 314
                                                                                  

consensus_9790#0      TGGTCCCGGAAGTTGCACGTGATAATTTGGGTGTCCCACTCATTGTTATATCGTGGTCTA 900
consensus_9790#1      TTGTCCCGGAAGTTGCACGTGATAATTTGGGTGTCCCACTCATTGTTATATCGTGGTCTA 355
consensus_9790#2      TGGTCCCGGAAGTTGCACGTGATAATTTGGGTGTCCCACTCATTGTTATATCGTGGTCTA 393
consensus_9790#3      TGGTCCCGGAAGTTGCACGTGATAATTTGGGTGTCCCACTCATTGTTATATCGTGGTCTA 389
consensus_9790#5      ------------------------------------------------------------
consensus_9790#4      TAGAAAGAAAATGTGAATGTACACAGCTAGAA---------------------------- 346
                                                                                  

consensus_9790#0      TTGCTGAAATGATTCGTTATTCATATTATGTGGCAGATATATGTAGGGTAAAGTTAAATT 960
consensus_9790#1      TTGCTGAAATGATTCGTTATTCATATTATGTGGCAGATATATGTAGGGTAAAGTTAAATT 415
consensus_9790#2      TTGCTGAAATGATTCGTTATTCAT------------------------------------ 417
consensus_9790#3      TTGCTGAAATGATTCGTTATT--------------------------------------- 410
consensus_9790#5      ------------------------------------------------------------
consensus_9790#4      ------------------------------------------------------------
                                                                                  

consensus_9790#0      TGCTAACTTGGTTGAGGTGAGGAAAATTTTTAATTCATTTACTTCGAAAGGTACTCAGGC 1020
consensus_9790#1      TGCTAACTTGGTTGAGGT----------------------------------ACTCAGGC 441
consensus_9790#2      ------------------------------------------------------------
consensus_9790#3      ------------------------------------------------------------
consensus_9790#5      ------------------------------------------------------------
consensus_9790#4      ------------------------------------------------------------
                                                                                  

consensus_9790#0      TTTATGATTTTGTATCCAACTGGGATTTCTGGTGAGGTTCTTCTAATAGTAAGTGGCTTA 1080
consensus_9790#1      TTTATGATTTTGTATCCAACTGGGATTTCTGGTGAGGTTCTTCTAATAGTAAGTGGCATA 501
consensus_9790#2      ------------------------------------------------------------
consensus_9790#3      ------------------------------------------------------------
consensus_9790#5      ------------------------------------------------------------
consensus_9790#4      ------------------------------------------------------------
                                                                                  

consensus_9790#0      ACGAGACTGAGGGAAACAGAACAATATTCCTTCGATCTTCCAAATGCTTTAAATTGTTCA 1140
consensus_9790#1      AAAAGACTGAGGGAAACAGAACAATATTCCTTCGATCTTCCAAATGCTTTAAATTGTTCA 561
consensus_9790#2      ------------------------------------------------------------
consensus_9790#3      ------------------------------------------------------------
consensus_9790#5      ------------------------------------------------------------
consensus_9790#4      ------------------------------------------------------------
                                                                                  

consensus_9790#0      CTCAGTTATTGGTTTGCTTTCGCTGCTATACTTATAACCTACATTCCAGGTTCAAAGACA 1200
consensus_9790#1      CTCAGTTATTGGTTTGCTTTCGCTGCTATACTTATAACCTACATTCCAGGTTCAAAGACA 621
consensus_9790#2      ------------------------------------------------------------
consensus_9790#3      ------------------------------------------------------------
consensus_9790#5      ------------------------------------------------------------
consensus_9790#4      ------------------------------------------------------------
                                                                                  

consensus_9790#0      ATGTACACTCACATGATGCGTCAAAGAAAGAAAGTTTTACAAAATTGTAACTAAGGAGCA 1260
consensus_9790#1      ATGTACACTCACATGATGCGTCAAAGAAAGAAAGTTTTACA------------------- 662
consensus_9790#2      ------------------------------------------------------------
consensus_9790#3      ------------------------------------------------------------
consensus_9790#5      ------------------------------------------------------------
consensus_9790#4      ------------------------------------------------------------
                                                                                  

consensus_9790#0      GTTGTTATTTTTTCATCGTATGAATAATCTAACTTATTTATAAATGTTTACTAAGTATCA 1320
consensus_9790#1      ------------------------------------------------------------
consensus_9790#2      ------------------------------------------------------------
consensus_9790#3      ------------------------------------------------------------
consensus_9790#5      ------------------------------------------------------------
consensus_9790#4      ------------------------------------------------------------
                                                                                  

consensus_9790#0      AC 1322
consensus_9790#1      --
consensus_9790#2      --
consensus_9790#3      --
consensus_9790#5      --
consensus_9790#4      --