These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9800#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 710 fasta sequence [ACTGTGCTTAACCCAGTGTTACTACATTCATTGAATCGATAATGAAGAATTTGTGGTTGCTGTTGTCTATCATAGCTCTATTCGCAGTCTTCGTTCAATCTGACGATCCACATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGAGACACCTTCAGTTAACTTACAAGGGAAAAACAATGATAAGTCTGAAAATCGCACAATAGACGAGACACTTTCAGTTAACTTACAAGAGAAAAACAATGAGACACCTTCAGTTAACTTACAAGGG-AAAAAC-ATGTGGATTATTCATTCAATTTGGGAACAAT-NNCACA-ATAT-AAACTGGAGGTCTAG-CAGGTGGTGAAACGATTCATCAATCTGGAAAGCACACTCGAAAATAAGTCAAAGGTGGTTGGTGCTATCAAAACGCGTAACAAACACCTAGAAATCGTCGNNTTCTTTTATCAAA] [+] EMBL CD152916 [ACTGTGCTTAACCCAGTGTTACTACATTCATTGAATCGATAATGAAGAATTTGTGGTTGCTGTTGTCTATCATAGCTCTATTCGCAGTCTTCGTTCAATCTGACGATCCACATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCACACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGAGACACCTTCAGTTAACTTACAAGGGANAAACAATGATAAGTCTGAAAATCGCACAATAGACGAGACACTTTCAGTTAACTTACCAGAGAAAAACANTGAGACACCTTCAGTTAACTTACAAGGGNNAAAAC ATGTGGATTATTCATTCAATTTGGGAACAAT NNCACA ATAT ANACTGGANGTCTAG CANGTGGTGAAACGNATCATCCATCTGGAAAGCACACTCGAAAATAAGTCAAAGGTGGTTGGTGCTATCAAAACGCGTAACAAACACCTAGAAATCGTCGNNTTCTTTTA ] [+] EMBL CD150276 [ GTGTTACTACATTCATTGAATCGATAATGAAGAACTTGTGGTTGCTGTTGTCTATCATAGCTCTATTCGCAGTCTTCGTTCAATCTGACGATC ] [+] EMBL CD150256 [ GTGTTACTACATTCATTGAATCGATAATGAAGAATTTGTGGTTGCTGTTGTCTATCATAGCTCTATTCGCAGTCTTCGTTCAA ] [+] EMBL CD150307 [ GTGTTACTACATTCATTGAATCGATAATGAAGAATTTGTGGTTGCTGTTGTCTATCATAGCTCTATTCGCAGTCTTCGTTCAA ] [+] EMBL CD150313 [ TGTTACTACATTCATTGAATCGATAATGAAGAATTTGTGGTTGCTGTTGTCTATCATAGCTCTATTCGCAGTCTTCGTTCAATCTGACGATCCACATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATGTAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGT ] [-] EMBL CD150175 [ TGTTACTACATTCATTGAATCGATAATGAAGAATTTGTGGTTGCTGTTGTCTATCATAGCTCTATTCGCAGTCTTCGTTCAAT ] [+] EMBL CD150153 [ TGTTACTACATTCATTGAATCGATAATGAAGAATTTGTGGTTGCTGTTGTCTATCATAGCTCTATTCGCAGTCTTCGTTCAATCTGACGATCCACATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGT ] [+] EMBL CD119502 [ TATTCGCAGTCTTCGTTCAATCTGACGATCCACATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAA ] [+] EMBL CD158968 [ CGCAGTCTTCGTTCAATCTGACGATCCACATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGAGACACCTTCAGTTAACTTACAAGGGAAAAACAATGATAAGTCTGAAAATCGCACAATAGACGAGACACTTTCAGTTAACTTACAA ] [-] EMBL CD157263 [ CGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGAGACACCTTCAGTTAACTTACAAGGGAAAAACAATGATAAGTCTGAAAATCGCACAATAGACGAGACACTTTCAGTTAACTTACAAGAGAAAAACAATGAGACACCTTCAGTTAACTTACAAGGG AAAAACAATGTGGATTATTCATTCAATTTGGGAACAATCAACA A ATATAAAACTGGAGGTCTAGACAGGTGGTGAAACGATTCATCAATCTGGAAAGCACACTCGAAAATAGGTCAAAGGT GTTGGTGCTATCAAAACGCGTAACAAACA CTAAGAATCGTCG TTTCTTTCATCAAA] [+] EMBL CD157576 [ AATATAAGTCTGAAAATCGCACAATAGACGAGACACCTTCAGTTAACTTACAAGGGAAAAACAATGATAAGTCTGAAAATCGCACAATAGACGAGACACTTTCAGTTAACTTACAAGAGAAAAACAATGAGACACCTTCAGTTAACTTACAAGGG AAAAACAATGTGGATTATTCATTCAATTTGGGAACAAT CAACANATATAAAACTGGAGGTCTAG CAGGTGGTGAAACGATTCATCAATCTGGAAAGCACACTCGNANAT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||