cluster # 9800

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Schistosoma mansoni
cluster # 9800 cluster # 9800 Sequences # 11 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9800#0 length = 710 sequences # 11
consensusID : consensus_9800#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 710
fasta sequence
                              [ACTGTGCTTAACCCAGTGTTACTACATTCATTGAATCGATAATGAAGAATTTGTGGTTGCTGTTGTCTATCATAGCTCTATTCGCAGTCTTCGTTCAATCTGACGATCCACATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGAGACACCTTCAGTTAACTTACAAGGGAAAAACAATGATAAGTCTGAAAATCGCACAATAGACGAGACACTTTCAGTTAACTTACAAGAGAAAAACAATGAGACACCTTCAGTTAACTTACAAGGG-AAAAAC-ATGTGGATTATTCATTCAATTTGGGAACAAT-NNCACA-ATAT-AAACTGGAGGTCTAG-CAGGTGGTGAAACGATTCATCAATCTGGAAAGCACACTCGAAAATAAGTCAAAGGTGGTTGGTGCTATCAAAACGCGTAACAAACACCTAGAAATCGTCGNNTTCTTTTATCAAA]

[+] EMBL CD152916             [ACTGTGCTTAACCCAGTGTTACTACATTCATTGAATCGATAATGAAGAATTTGTGGTTGCTGTTGTCTATCATAGCTCTATTCGCAGTCTTCGTTCAATCTGACGATCCACATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCACACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGAGACACCTTCAGTTAACTTACAAGGGANAAACAATGATAAGTCTGAAAATCGCACAATAGACGAGACACTTTCAGTTAACTTACCAGAGAAAAACANTGAGACACCTTCAGTTAACTTACAAGGGNNAAAAC ATGTGGATTATTCATTCAATTTGGGAACAAT NNCACA ATAT ANACTGGANGTCTAG CANGTGGTGAAACGNATCATCCATCTGGAAAGCACACTCGAAAATAAGTCAAAGGTGGTTGGTGCTATCAAAACGCGTAACAAACACCTAGAAATCGTCGNNTTCTTTTA     ]
[+] EMBL CD150276             [               GTGTTACTACATTCATTGAATCGATAATGAAGAACTTGTGGTTGCTGTTGTCTATCATAGCTCTATTCGCAGTCTTCGTTCAATCTGACGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD150256             [               GTGTTACTACATTCATTGAATCGATAATGAAGAATTTGTGGTTGCTGTTGTCTATCATAGCTCTATTCGCAGTCTTCGTTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD150307             [               GTGTTACTACATTCATTGAATCGATAATGAAGAATTTGTGGTTGCTGTTGTCTATCATAGCTCTATTCGCAGTCTTCGTTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD150313             [                TGTTACTACATTCATTGAATCGATAATGAAGAATTTGTGGTTGCTGTTGTCTATCATAGCTCTATTCGCAGTCTTCGTTCAATCTGACGATCCACATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATGTAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGT                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD150175             [                TGTTACTACATTCATTGAATCGATAATGAAGAATTTGTGGTTGCTGTTGTCTATCATAGCTCTATTCGCAGTCTTCGTTCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD150153             [                TGTTACTACATTCATTGAATCGATAATGAAGAATTTGTGGTTGCTGTTGTCTATCATAGCTCTATTCGCAGTCTTCGTTCAATCTGACGATCCACATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGT                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD119502             [                                                                              TATTCGCAGTCTTCGTTCAATCTGACGATCCACATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD158968             [                                                                                  CGCAGTCTTCGTTCAATCTGACGATCCACATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGAGACACCTTCAGTTAACTTACAAGGGAAAAACAATGATAAGTCTGAAAATCGCACAATAGACGAGACACTTTCAGTTAACTTACAA                                                                                                                                                                                                                              ]
[-] EMBL CD157263             [                                                                                                                                                                                                                                                                                                                   CGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGAGACACCTTCAGTTAACTTACAAGGGAAAAACAATGATAAGTCTGAAAATCGCACAATAGACGAGACACTTTCAGTTAACTTACAAGAGAAAAACAATGAGACACCTTCAGTTAACTTACAAGGG AAAAACAATGTGGATTATTCATTCAATTTGGGAACAATCAACA A ATATAAAACTGGAGGTCTAGACAGGTGGTGAAACGATTCATCAATCTGGAAAGCACACTCGAAAATAGGTCAAAGGT GTTGGTGCTATCAAAACGCGTAACAAACA CTAAGAATCGTCG TTTCTTTCATCAAA]
[+] EMBL CD157576             [                                                                                                                                                                                                                                                                                                                                                                                          AATATAAGTCTGAAAATCGCACAATAGACGAGACACCTTCAGTTAACTTACAAGGGAAAAACAATGATAAGTCTGAAAATCGCACAATAGACGAGACACTTTCAGTTAACTTACAAGAGAAAAACAATGAGACACCTTCAGTTAACTTACAAGGG AAAAACAATGTGGATTATTCATTCAATTTGGGAACAAT  CAACANATATAAAACTGGAGGTCTAG CAGGTGGTGAAACGATTCATCAATCTGGAAAGCACACTCGNANAT                                                                      ]




>consensus_9800#0
ACTGTGCTTAACCCAGTGTTACTACATTCATTGAATCGATAATGAAGAATTTGTGGTTGC
TGTTGTCTATCATAGCTCTATTCGCAGTCTTCGTTCAATCTGACGATCCACATAAACCTG
TAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACA
AATATAAGTCTGAAAATCGCACAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGA
CGAATCCGAAATATTCATTCAGTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCA
CAATAGACGATAAACCTGTAAGAAAACCAATTGATTGGACGAATCCGAAATATTCATTCA
GTTATGGAAGAATCTACAAATATAAGTCTGAAAATCGCACAATAGACGAGACACCTTCAG
TTAACTTACAAGGGAAAAACAATGATAAGTCTGAAAATCGCACAATAGACGAGACACTTT
CAGTTAACTTACAAGAGAAAAACAATGAGACACCTTCAGTTAACTTACAAGGGAAAAACA
TGTGGATTATTCATTCAATTTGGGAACAATNNCACAATATAAACTGGAGGTCTAGCAGGT
GGTGAAACGATTCATCAATCTGGAAAGCACACTCGAAAATAAGTCAAAGGTGGTTGGTGC
TATCAAAACGCGTAACAAACACCTAGAAATCGTCGNNTTCTTTTATCAAA
clustalw multiple alignements is not computed in this case