cluster # 9846

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Schistosoma mansoni
cluster # 9846 cluster # 9846 Sequences # 11 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9846#0 length = 314 sequences # 11

consensusID : consensus_9846#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 314
fasta sequence

                              [TTAATAGCCAGTATTTTACGTCTAGTTGAGAAAATGCTTCCAAAGAAGGAGAAACTTATTAAAAAGAAGGCACTAACATTGTCATCCAACAAGAAAGATTCAGAGGTAGATGTTGTCAAAAACAAACTGGAATTAAGAAAGCGACTTTTACCTGCGTTGTGTATGCCAAATAAAGATCCAAACGATGAGCGATTAAATTTAGAATCTGAAAATGTAGAACCATGCGGTGATACTGAT-AAAAAGGACGGGATTCGTAACAAATTCGTTCATCCTGATGAACTGGAAGA--GGATCCCNGTATATAGCGATATCATGA]

[+] EMBL CD183132             [TTAATAGCCAGTATCTTACGTCTAGTTGAGAAAATGCTTCCAAAGAAGGAGAAACTTATTAAAAAGAAGGCACTAACATTGTCATCCAACAAGAAAGATTCAGAGGTAGATGTTGTCAAAAACAAACTGGAATTAAGAAAGCGACTTTTACCTGCGTTGTGTATGCCAAATAAAGATCCAAACGATGAGCGATTAAATTTAGAATCTGAAAATGTAGAACCATGCGGTGATACTGAT AAAAAGGACGGGATTCGTAACAAATTCGTTCATCCTGATGAACTGGAAGA  GGATCCCNGTATATAGCGATATCATGA]
[+] EMBL CD183120             [TTAATAGCCAGTATTTTACGTCTAGTTGAGAAAATGCTTCCAAAGAAGGAGAAACTTATTAAAAAGAAGGCACTAACATTGTCATCCAACAAGAAAGATTCAGAGGTAGATGTTGTCAAAAACAAACTGGAATTAAGAAAGCGACTTTTACCTGCGTTGTGTATGCCAAATAAAGATCCAAACGATGAGCGATTAAATTTAGAATCTGAAAATGTAGAACCATGCGGTGATACTGAT AAAAAGGACGGGATTCGTAACAAATTCGTTCATCCTGATGAACTGGAAGAGGGGATCCNNGTAT               ]
[+] EMBL CD183129             [TTAATAGCCAGTATTTTACGTCTAGTTGAGAAAATGCTTCCAAAGAAGGAGAAACTTATTAAAAAGAAGGCACTAACATTGTCATCCAACAAGAAAGATTCAGAGGTAGATGTTGTCAAAAACAAACTGGAATTAAGAAAGCGACTTTTACCTGCGTTGTGTATGCCAAATAAAGATCCAAACGATGAGCGATTAAATTTAGAATCTGAAAATGTAGAACCATGCGGTGATACTGAT AAAAAGGACGGGATTCGTAACAAATTCGTTCATCCTGATGAACTG                                  ]
[+] EMBL CD183115             [TTAATAGCCAGTATTTTACGTCTAGTTGAGAAAATGCTTCCAAAGAAGGAGAAACTTATTAAAAAGAAGGCACTAACATTGTCATCCAACAAGAAAGATTCAGAGGTAGATGTTGTCAAAAACAAACTGGAATTAAGAAAGCGACTTTTACCTGCGTTGTGTATGCCAAATAAAGATCCAAACGATGAGCGATTAAATTTAGAATCTGAAAATGTAGAACCATGCGGTGATACTGAT AAAAAGGACGGGATTCGTAACAAATTCGTTCATCCTGATGAACT                                   ]
[+] EMBL CD182916             [TTAATAGCCAGTATTTTACGTCTAGTTGAGAAAATGCTTCCAAAGAAGGAGAAACTTATTAAAAAGAAGGCACTAACATTGTCATCCAACAAGAAAGATTCAGAGGTAGATGTTGTCAAAAACAAACTGGAATTAAGAAAGCGACTTTTACCTGCGTTGTGTATGCCAAATAAAGATCCAAACGATGAGCGATTAAATTTAGAATCTGAAAATGTAGAACCATGCGGTGATACTGAT AAAAAGGACGGGATTCGTAACAAATTCGTTCATC                                             ]
[+] EMBL CD183008             [TTAATAGCCAGTATTTTACGTCTAGTTGAGAAAATGCTTCCAAAGAAGGAGAAACTTATTAAAAGGAAGGCACTAACATTGTCATCCAACAAGAAAGATTCAGAGGTAGATGTTGTCAAAAACAAACTGGAATTAAGAAAGCGACTTTTACCTGCGTTGTGTATGCCAAATAAAGATCCAAACGATGAGCGATTAAATTTAGAATCTGAAAATGTAGAACCATGCGGTGATACTGAT AAAAAGGACGGGATTCGTAACAAATTCGT                                                  ]
[+] EMBL CD182930             [TTAATAGCCAGTATTTTACGTCTAGTTGAGAAAATGCTTCCAAAGAAGGAGAAACTTATTAAAAAGAAGGCACTAACATTGTCATCCAACAAGAAAGATTCAGAGGTAGATGTTGTCAAAAACAAACTGGAATTAAGAAAGCGACTTTTACCTGCGTTGTGTATGCCAAATAAAGATCCAAACGATGAGCGATTAAATTTAGAATCTGAAAATGTAGAACCATGCGGTGATACTGAT AAAAAGGACGGGATTCa                                                              ]
[+] EMBL CD182937             [TTAATAGCCAGTATTTTACGTCTAGTTGAGAAAATGCTTCCAAAGAAGGAGAAACTTATTAAAAAGAAGGCACTAACATTGTCATCCAACAAGAAAGATTCAGAGGTAGATGTTGTCAAAAACAAACTGGAATTAAGAAAGCGACTTTTACCTGCGTTGTGTATGCCAAATAAAGATCCAAACGATGAGCGATTAAATTTAGAATCTGANAATGTAGAACCATGCGGTGATACTGATAAAAAAGGACGGGA                                                                  ]
[+] EMBL CD182961             [TTAATAGCCAGTATTTTACGTCTAGTTGAGAAAATGCTTCCAAAGAAGGAGAAACTTATTAAAAAGAAGGCACTAACATTGTCATCCAACAAGAAAGATTCAGAGGTAGATGTTGTCAAAAACAAACTGGAATTAAGAAAGCGACTTTTACCTGCGTTGTGTATGCCAAATAAAGATCCAAACGATGAGCGATTAAATTTAGAATCTGANAATGTAGAACCATGCGGTGATACTGAT AAAAAGGACGGG                                                                   ]
[+] EMBL CD183174             [TTAATAGCCAGTATTTTACGTCTAGTTGAGAAAATGCTTCCAAAGAAGGAGAAACTTATTAAAAAGAAGGCACTAACATTGTCATCCAACAAGAAAGATTCAGAGGTAGATGTTGTCAAAAACAAACTGGAATTAAGAAAGCGACTTTTACCTGCGTTGTGTATGCCAAATAAAGATCCAAACGATGAGCGATTAAATTTAGAATCTGAAAATGTAGAACCATGCGGTGATACTGAT AAAAgg                                                                         ]
[+] EMBL CD183094             [TTAATAGCCAGTATTTTACGTCTAGTTGAGGAATTGCTTCCAAAGAAGGAGAATCTTATTAAAAAGAAGGCACTAACATTGTCATCCAACAAGAAAGATTCAGAGGTAGATGTTGTCAAAAACAAACTGGAATTAAGAAAGCGACTTTTACCTGCGTTGTGTATGCCAAATAAAGATCCAAACGATGTGCG                                                                                                                              ]




>consensus_9846#0
TTAATAGCCAGTATTTTACGTCTAGTTGAGAAAATGCTTCCAAAGAAGGAGAAACTTATT
AAAAAGAAGGCACTAACATTGTCATCCAACAAGAAAGATTCAGAGGTAGATGTTGTCAAA
AACAAACTGGAATTAAGAAAGCGACTTTTACCTGCGTTGTGTATGCCAAATAAAGATCCA
AACGATGAGCGATTAAATTTAGAATCTGAAAATGTAGAACCATGCGGTGATACTGATAAA
AAGGACGGGATTCGTAACAAATTCGTTCATCCTGATGAACTGGAAGAGGATCCCNGTATA
TAGCGATATCATGA

clustalw multiple alignements is not computed in this case