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Schistosoma mansoni
cluster # 9855 cluster # 9855       Sequences # 11       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9855#0 length = 1257 sequences # 11  

consensusID : consensus_9855#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1257
fasta sequence
                              [GATAAAATGTTCGGGCATCATTAGGATAGGAATTCGAATCTCTTGAACAGAAAGTAAACATTTTTAGTACGGGATATTTTTACAGAAGTTGAAAGATATTTACAGATACATAGTATGCATGGACTGAACCAATGCAATTCATTTACACAATGATTAGATTTTGAAAATGGTTTAAGAGAAAAACCGTATAGTTGGAGAGAATCCAAAGCATTATTATAAAGCGAGCGAAATTCAGATAATCGACTTTTACCAGACACTAAGCGCCTTACTTTCTGTCTATCTTCACCGATAATCATTCGCCAATCTCCATTGTAAGATATTGAAGAAATTGTGTAGAATAAGTCATATTCATTCAACGGGAAA-TTTTTTGGATAATTTTGTAAAATTGAGTAAGATACGGAGGCGAGTAGATTTTTATTTTGTGATGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCAGACTCATTAGGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA-TTACGAACAATTATAA-CTA-GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATATTTTTCTAATGCTTACGACAGTTCCGGACTTAACATCTTCTAGGCGTCTCTGACCACGACGTAGTGCTGCCTCTATACCAAAAACATCAGTCTTTTTGTAGGCACTTGCTTGAGATCGGAACTCAGAACGGATAAAGTCTTTGAGTTGATCAGAGTTAGAACCGTTATTTACACTGCTGGTACTATTTTCTAACTTGGACTTGATCTGCAACAAATCAACAGTTCGTAGAAAATTTCGATACAAACGAATAACTTCTAGTTGAAGTCTGCTATGACCAGAATTCATAAAACTTGAGTCAACATG]

[-] EMBL AW053296             [GATAAAATGTTCGGGCATCATTAGGATAGGAATTCGAATCTCTTGAACAGAAAGTAAACATTTTTAGTACGGGATATTTTTACAGAAGTTGAAAGATATTTACAGATACATAGTATGCATGGACTGAACCAATGCAATTCATTTACACAATGATTAGATTTTGAAAATAGTTTAAGAGAAAAACCGTATAGTTGGAGAGAATCCAAAGCATTATTATAAAGCGAGCGAAATTCAGATAATCGACTTTTACCAGACACTAAGCGCCTTACTTTCTGTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD151678             [                                                                                                                                                               TTTGAAAATGGTTTAAGAGAAAAACCGTATAGTTGGAGAGAATCCAAAGCATTATTATAAAGCGAGCGAAATTCAGATAATCGACTTTTACCAGACACTAAGCGCCTTACTTTCTGTCTATCTTCACCGATAATCATTCGCCAATCTCCATTGTAAGATATTGAAGAAATTGTGTAGAATAAGTCATATTCATTCAACGGGAAA TTTTTTGGATAATTTTGTAAAATTGAGTAAGATACGGAGGCGGGTAGATTTTTATTTTGTGATGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCAGACTCATTAGGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGATTTACGAAC ATTATTA CTA GATCAATAAGTGAATTACTTGATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD151736             [                                                                                                                                                               TTTGAAAATGGTTTAAGAGAAAAACCGTATAGTTGGAGAGAATCCATAGCATTATTATAAAGCGAGCGAAATTCATATAATCGACTTTTACCAGACACTAAGCGCCTTACTTTCTGTCTATCTTCACCGATAATCATTCGCCAATCTCCATTGTAAGATATTGAAGAAATTGTGTAGAATAAGTCATATTCATTCAACGGGAAA TTTTTTGGATAATTTTGTAAAATTGAGTAAGATACGGAGGCGAGTAGATTTTTATTTTGTGATGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCATACTCATTATGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCGAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTGCGAACTACAAAATTGTACTGATTACGGTTTTCACAAATATTTCTCAGATGCCATTCCACAGGA TTACGAACACTT TAANCTA GATCAATAAGTGAATTACTTGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD113410             [                                                                                                                                                               TTTGAAAATGGTTTAAGAGAAAAACCGTATAGTTGGAGAGAATCCAAAGCATTATTATAAAGCGAGCGAAATTCAGATAATCGACTTTTACCAGACACTAAGCGCCTTACTTTCTGTCTATCTTCACCGATAATCATTCGCCAATCTCCATTGTAAGATATTGAAGAAATTGTGTAGAATAAGTCATATTCATTCAACGGGAAA TTTTTTGGATAATTTTGTAAAATTGAGTAAGATACGGAGGCGAGTAGATTTTTATTTTGTGGTGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCGGACTCATTAGGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATTAATGGATTGTAATAAACTNTGGGACCGGGAATACGAGAATGANAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA TTACGAANCATTATAA CTANGATC ATAAGTGAATTACTTGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD135715             [                                                                                                                                                                                                                                                                     CGCCTTACTTTCTGTCTATCTTCACCGATAATCATTCGCCAATCTCAATTGTAAGATATTGAAGAAATTGTGTAGAATAAGTCATATTCATTCAACGGGAAATTTTTTTGGACAATTTTGTAAAATTGAGTAAGATACGGAGGCGAGTAGATTTTTATTTTGTGATGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCAGACTCATTAGGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD196442             [                                                                                                                                                                                                                                                                                                                                                                                                             ACGGAGGCGGTTAGATTTTTATTTTGTGATGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCAGACTCATTAGGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGA                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD184031             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATATTT                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD183955             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATATTT                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD200973             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCGCAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAGCGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATATTTTTCTAATGCTTACGACAGTTCCGGACTTAACATCTTCTAGGCGTCTCTGACCACGACGTAGTGCTGCCTCTATACCAAAAACATCAGTCTTTTTG                                                                                                                                                                                                              ]
[-] EMBL CD169775             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATTTTTCAGATGCCATTCCACAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATAT                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD131826             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATATTTTTCTAATGCTTACGACAGTTCCGGACTTAACATCTTCTAGGCGTCTCTGACCACGACGTAGTGCTGCCTCTATACCAAAAACATCAGTCTTTTTGTAGGCACTTGCTTGAGATCGGAACTCAGAACGGATAAAGTCTTTGAGTTGATCAGAGTTAGAACCGTTATTTACACTGCTGGTACTATTTTCTAACTTGGACTTGATCTGCAACAAATCAACAGTTCGTAGAAAATTTCGATACAAACGAATAACTTCTAGTTGAAGTCTGCTATGACCAGAATTCATAAAACTTGAGTCAACATG]


>consensus_9855#0 GATAAAATGTTCGGGCATCATTAGGATAGGAATTCGAATCTCTTGAACAGAAAGTAAACA TTTTTAGTACGGGATATTTTTACAGAAGTTGAAAGATATTTACAGATACATAGTATGCAT GGACTGAACCAATGCAATTCATTTACACAATGATTAGATTTTGAAAATGGTTTAAGAGAA AAACCGTATAGTTGGAGAGAATCCAAAGCATTATTATAAAGCGAGCGAAATTCAGATAAT CGACTTTTACCAGACACTAAGCGCCTTACTTTCTGTCTATCTTCACCGATAATCATTCGC CAATCTCCATTGTAAGATATTGAAGAAATTGTGTAGAATAAGTCATATTCATTCAACGGG AAATTTTTTGGATAATTTTGTAAAATTGAGTAAGATACGGAGGCGAGTAGATTTTTATTT TGTGATGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCAGACTCATTAGGA ATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAA TCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCA AGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAA TGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTG TAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGATTACGAACAATT ATAACTAGATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGAT CCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGT TTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATATTTTTCT AATGCTTACGACAGTTCCGGACTTAACATCTTCTAGGCGTCTCTGACCACGACGTAGTGC TGCCTCTATACCAAAAACATCAGTCTTTTTGTAGGCACTTGCTTGAGATCGGAACTCAGA ACGGATAAAGTCTTTGAGTTGATCAGAGTTAGAACCGTTATTTACACTGCTGGTACTATT TTCTAACTTGGACTTGATCTGCAACAAATCAACAGTTCGTAGAAAATTTCGATACAAACG AATAACTTCTAGTTGAAGTCTGCTATGACCAGAATTCATAAAACTTGAGTCAACATG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)