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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9855#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1257 fasta sequence
[GATAAAATGTTCGGGCATCATTAGGATAGGAATTCGAATCTCTTGAACAGAAAGTAAACATTTTTAGTACGGGATATTTTTACAGAAGTTGAAAGATATTTACAGATACATAGTATGCATGGACTGAACCAATGCAATTCATTTACACAATGATTAGATTTTGAAAATGGTTTAAGAGAAAAACCGTATAGTTGGAGAGAATCCAAAGCATTATTATAAAGCGAGCGAAATTCAGATAATCGACTTTTACCAGACACTAAGCGCCTTACTTTCTGTCTATCTTCACCGATAATCATTCGCCAATCTCCATTGTAAGATATTGAAGAAATTGTGTAGAATAAGTCATATTCATTCAACGGGAAA-TTTTTTGGATAATTTTGTAAAATTGAGTAAGATACGGAGGCGAGTAGATTTTTATTTTGTGATGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCAGACTCATTAGGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA-TTACGAACAATTATAA-CTA-GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATATTTTTCTAATGCTTACGACAGTTCCGGACTTAACATCTTCTAGGCGTCTCTGACCACGACGTAGTGCTGCCTCTATACCAAAAACATCAGTCTTTTTGTAGGCACTTGCTTGAGATCGGAACTCAGAACGGATAAAGTCTTTGAGTTGATCAGAGTTAGAACCGTTATTTACACTGCTGGTACTATTTTCTAACTTGGACTTGATCTGCAACAAATCAACAGTTCGTAGAAAATTTCGATACAAACGAATAACTTCTAGTTGAAGTCTGCTATGACCAGAATTCATAAAACTTGAGTCAACATG]
[-] EMBL AW053296 [GATAAAATGTTCGGGCATCATTAGGATAGGAATTCGAATCTCTTGAACAGAAAGTAAACATTTTTAGTACGGGATATTTTTACAGAAGTTGAAAGATATTTACAGATACATAGTATGCATGGACTGAACCAATGCAATTCATTTACACAATGATTAGATTTTGAAAATAGTTTAAGAGAAAAACCGTATAGTTGGAGAGAATCCAAAGCATTATTATAAAGCGAGCGAAATTCAGATAATCGACTTTTACCAGACACTAAGCGCCTTACTTTCTGTCTA ]
[+] EMBL CD151678 [ TTTGAAAATGGTTTAAGAGAAAAACCGTATAGTTGGAGAGAATCCAAAGCATTATTATAAAGCGAGCGAAATTCAGATAATCGACTTTTACCAGACACTAAGCGCCTTACTTTCTGTCTATCTTCACCGATAATCATTCGCCAATCTCCATTGTAAGATATTGAAGAAATTGTGTAGAATAAGTCATATTCATTCAACGGGAAA TTTTTTGGATAATTTTGTAAAATTGAGTAAGATACGGAGGCGGGTAGATTTTTATTTTGTGATGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCAGACTCATTAGGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGATTTACGAAC ATTATTA CTA GATCAATAAGTGAATTACTTGATGT ]
[+] EMBL CD151736 [ TTTGAAAATGGTTTAAGAGAAAAACCGTATAGTTGGAGAGAATCCATAGCATTATTATAAAGCGAGCGAAATTCATATAATCGACTTTTACCAGACACTAAGCGCCTTACTTTCTGTCTATCTTCACCGATAATCATTCGCCAATCTCCATTGTAAGATATTGAAGAAATTGTGTAGAATAAGTCATATTCATTCAACGGGAAA TTTTTTGGATAATTTTGTAAAATTGAGTAAGATACGGAGGCGAGTAGATTTTTATTTTGTGATGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCATACTCATTATGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCGAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTGCGAACTACAAAATTGTACTGATTACGGTTTTCACAAATATTTCTCAGATGCCATTCCACAGGA TTACGAACACTT TAANCTA GATCAATAAGTGAATTACTTGATG ]
[+] EMBL CD113410 [ TTTGAAAATGGTTTAAGAGAAAAACCGTATAGTTGGAGAGAATCCAAAGCATTATTATAAAGCGAGCGAAATTCAGATAATCGACTTTTACCAGACACTAAGCGCCTTACTTTCTGTCTATCTTCACCGATAATCATTCGCCAATCTCCATTGTAAGATATTGAAGAAATTGTGTAGAATAAGTCATATTCATTCAACGGGAAA TTTTTTGGATAATTTTGTAAAATTGAGTAAGATACGGAGGCGAGTAGATTTTTATTTTGTGGTGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCGGACTCATTAGGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATTAATGGATTGTAATAAACTNTGGGACCGGGAATACGAGAATGANAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA TTACGAANCATTATAA CTANGATC ATAAGTGAATTACTTGATG ]
[-] EMBL CD135715 [ CGCCTTACTTTCTGTCTATCTTCACCGATAATCATTCGCCAATCTCAATTGTAAGATATTGAAGAAATTGTGTAGAATAAGTCATATTCATTCAACGGGAAATTTTTTTGGACAATTTTGTAAAATTGAGTAAGATACGGAGGCGAGTAGATTTTTATTTTGTGATGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCAGACTCATTAGGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGT ]
[-] EMBL CD196442 [ ACGGAGGCGGTTAGATTTTTATTTTGTGATGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCAGACTCATTAGGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGA ]
[-] EMBL CD184031 [ CGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATATTT ]
[-] EMBL CD183955 [ CGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATATTT ]
[+] EMBL CD200973 [ ACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCGCAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAGCGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATATTTTTCTAATGCTTACGACAGTTCCGGACTTAACATCTTCTAGGCGTCTCTGACCACGACGTAGTGCTGCCTCTATACCAAAAACATCAGTCTTTTTG ]
[-] EMBL CD169775 [ ATTTTTCAGATGCCATTCCACAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATAT ]
[-] EMBL CD131826 [ AATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATATTTTTCTAATGCTTACGACAGTTCCGGACTTAACATCTTCTAGGCGTCTCTGACCACGACGTAGTGCTGCCTCTATACCAAAAACATCAGTCTTTTTGTAGGCACTTGCTTGAGATCGGAACTCAGAACGGATAAAGTCTTTGAGTTGATCAGAGTTAGAACCGTTATTTACACTGCTGGTACTATTTTCTAACTTGGACTTGATCTGCAACAAATCAACAGTTCGTAGAAAATTTCGATACAAACGAATAACTTCTAGTTGAAGTCTGCTATGACCAGAATTCATAAAACTTGAGTCAACATG]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||