cluster # 9857

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Schistosoma mansoni
cluster # 9857 cluster # 9857 Sequences # 11 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9857#0 length = 1174 sequences # 6
consensus_9857#1 length = 759 sequences # 3

consensus_9857#2 length = 437 sequences # 1
consensus_9857#3 length = 433 sequences # 1

consensusID : consensus_9857#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1174
fasta sequence

                              [TCTCACATATAATCTTTTCTTTAAGAACTTGCTCTAACGTAGCGTACTCTCCTCGGTATGCGCCATTAACGATGAGAACTGTTGATGATGGTTCAGGAATAACTGTTTGAACGTGATTTTGATCCACTTTGATCTTTGTGTGACATTCCACTGTCCTTACGATAGCCGTGTAATTATCCAGCATCTTCAAAACTGTGGCATGTCTCCAACGTAGATCATCAGGAAGTTTGCGATTGATTAGCTTGACTTCAATCCATTCTGTCATCCAGTAATCTCTTCGGTTTCTCTTGTCTTTAAAAGCTTCTTCTTTTTCCATTAATTCATCCAAGGCACGCCGACGAACTCCAGAAGCTGCTGTAGTACGTGTGTCTTGTTTCTTTTCGGCACTAGATTTGGATTTTTCTTCACGTGCTTTTTTTTCGGCAATCAAGAGCGGATTTGCAGTTCTTTCCTTTTTCGGACCCAATGTCATAAGGCTCTGAGGTTTCTCCTCCGAAGAACTTGGGGAAGGATCAGGCTCTGTGCTTACCACCTGGACAGGTGGCTTTTTTTGAGACAAAGAAATCTCCAGTTTAATTGGTTCATCTTCATTGGTGCGGACGAGAGGAGTGTATACGGGGCCTTCCGTCTGTTCAACTTTGTTGATATTGTGTTCTATTTGACGCTCTAGAAACTGTTTGTTTATTTCATCTTCCGTCTTTTCCAAACGCTCACTCTGTTCTTGTTTTTTTAACTTTTCTGGGTCGCGA-TCAATGTATTCGATAAACCACCCTTTCTCAGTCTCATCTACCTTGCAAATTCCCTGTTTTCCAAGCCACATGCATAGTCCTGTGAGTGTATGCCATCTTGTCGCATTCATGTGTACATGTTCTTTGTCTTTGATATATTCTTGATAAACGACATTGGAATGCACGCGTTTCCCACCGAACTGTCGACGCAGTATATCGAGGTATCCTTTCAAAAAGTCAGAAGAGAAACTGCTGATGAACTTTCCGCCGTCTTCAGCAAAGAGTTTCATTTGCCTGTGGTGAGACTCAGACATCGTATGGCATTTATAACCATTTTCATCTCTGCACTGTTTTTGACACATCTGACAATACCATCGTAGTTTCTGCAATCCTTTGGATTTGATTCTGTTGGATATAGCTTTTGGAGTTAGGAAACCTGTTTTTCT]

[-] EMBL AI977197             [TCTCACATATAATCTTTTCTTTAAGAACTTGCTCTAACGTAGCGTACTCTCCTCGGTATGCGCCATTAACGATGAGAACTGTTGATGATGGTTCAGGAATAACTGTTTGAACGTGATTTTGATCCACTTTGATCTTTGTGTGACATTCCACTGTCCTTACGATAGCCGTGTAATTATCCAGCATCTTCAAAACTGTGGCATGTCTCCAACGTAGATCATCAGGAAGTTTGCGATTGATTAGCTTGACTTCAATCCATTCTGTCATCCAGTAATCTCTTCGGTTTCTCTTGTCTTTAAAAGCTTCTTCTTTTTCCATTAATTCATCCAAGGCACGCCGACGAACTCCAGAAGCTGCTGTAGTACGTGTGTCTTGTTTCTTTTCGGCACTAGATTTGGATTTTTCTTCACGTGCTTTTTTTTCGGCAATCAAGAGCGGATTTGCAGTTCTTTCCTTTTTCGGACCCAATGTCATAAGGCTCTGAGGTTTCTCCTCCGAAGAACTTGGGGAAGGATCAGGCTCTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD111712             [                                                             GCCATTAACGATGAGAACTGTTGATGATGGTTCAGGAATAACTGTTTGAACGTGATTTTGATCCACTTTGATCTTTGTGTGACATTCCACTGTCCTTACGATAGCCGTGTAATTATCCAGCATCTTCAAAACTGTGGCATGTCTCCAACGTAGATCATCAGGAAGTTTGCGATTGATTAGCTTGACTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD145007             [                                                                                                                                                                                TCCAGCATCTTCAAAACTGTGGCATGTCTCCAACGTAGATCATCAGGAAGTNTGCGATTGATTAGCTTGACTTCAATCCCTTCTGTCATCCAGTAATCTCTTCGGTTTCTCTTGTCTTTAAAAGCTTCTTCTTTTTCCATTAATTCATCCAAGGCACGCCGACGAACTCCAGAAGCTGCTGTAGTACGTGTGTCTTGTTTCTTTTCGGCACTAGATTTGGATTTTTCTTCACGTGCTTTTTTTTCGGCAATCAAGAGCGGATTTGCAGTTCTTTCCTTTTTCGGACCCAATGTCATAAGGCTCTGAGGTTTCTCCTCCGAAGAACTTGGGGAAGGATCAGGCTCTGTGCTTACCACCTGGACAGGTGGCTTTTTTTGAGACAAAGAAATCTCCAGTTTAATTGGTTCATCTTCATTGGTGCGGACGAGAGGAGTGTATACGGGGCCTTCCGTCTGTTCAACTTTGTTGATATTGTGTTCTATTTGACGCTCTAGAAACTGTTTGTTTATTTCATCTTCCGTCTTTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD084235             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTTTCTCCTCCGAAGAACTTGGGGAAGGATCAAGCTCTGTGCTTACCACCTGGACAGGTGGCTTTTTTTGAGACAAAGAAATCTCCAGTTTAATTGGTTCATCTTCATTGGTGCGGACGAGAGGAGTGTATACGGGGCCTTCCGTCTGTTCAACTTTGTTGATATTGTGTTCTATTTGACGCTCTAGAAACTGTTTGTTTATTTCATCTTCCGTCTTTTCCAAACGCTCACTCTGTTCTTGTTTTTTTAACTTTTCTGGGTCGCGA TCAATGTATTCGATAAACCACCCTTTCTCAGTCTCATCTACCTTGCAAATTCCCTGTTTTCCAAGCCACATGCATAGTCCTGTGAGTGTATGCCATCTTGTCGCATTCATGTGTACATGTTCTTTGTCTTTGATATATTCTTGATAAACGACATTGGAATGCACGCGTTTCCCACCGAACTGTCGACGCAGTATATCGAGGTATCCTTTCAAAAAGTC                                                                                                                                                                                                               ]
[-] EMBL CD084236             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTCTCCTCCGAAGAACTTGGGGAAGGATCAAGCTCTGTGCTTACCACCTGGACAGGTGGCTTTTTTTGAGACAAAGAAATCTCCAGTTTAATTGGTTCATCTTCATTGGTGCGGACGAGAGGAGTGTATACGGGGCCTTCCGTCTGTTCAACTTTGTTGATATTGTGTTCTATTTGACGCTCTAGAAACTGTTTGTTTATTTCATCTTCCGTCTTTTCCAAACGCTCACTCTGTTCTTGTTTTTTTAACTTTTCTGGGTCGCGACTCAATGTATTCGATAAACCACCCTTTCTCAGTCTCATCTA                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD082740             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGACGAGAGGAGTGTATACGGGGCCTTCCGTCTGTTCAACTTTGTTGATATTGTGTTCTATTTGACGCTCTAGAAACTGTTTGTTTATTTCATCTTCCGTCTTTTCCAAACGCTCACTCTGTTCTTGTTTTTTTAACTTTTCTGGGTCGCGA TCAATGTATTCGATAAACCACCCTTTCTCAGTCTCATCTACCTTGCAAATTCCCTGTTTTCCAAGCCACATGCATAGTCCTGTGAGTGTATGCCATCTTGTCGCATTCATGTGTACATGTTCTTTGTCTTTGATATATTCTTGATAAACGACATTGGAATGCACGCGTTTCCCACCGAACTGTCGACGCAGTATATCGAGGTATCCTTTCAAAAAGTCAGAAGAGAAACTGCTGATGAACTTTCCGCCGTCTTCAGCAAAGAGTTTCATTTGCCTGTGGTGAGACTCAGACATCGTATGGCATTTATAACCATTTTCATCTCTGCACTGTTTTTGACACATCTGACAATACCATCGTAGTTTCTGCAATCCTTTGGATTTGATTCTGTTGGATATAGCTTTTGGAGTTAGGAAACCTGTTTTTCT]




>consensus_9857#0
TCTCACATATAATCTTTTCTTTAAGAACTTGCTCTAACGTAGCGTACTCTCCTCGGTATG
CGCCATTAACGATGAGAACTGTTGATGATGGTTCAGGAATAACTGTTTGAACGTGATTTT
GATCCACTTTGATCTTTGTGTGACATTCCACTGTCCTTACGATAGCCGTGTAATTATCCA
GCATCTTCAAAACTGTGGCATGTCTCCAACGTAGATCATCAGGAAGTTTGCGATTGATTA
GCTTGACTTCAATCCATTCTGTCATCCAGTAATCTCTTCGGTTTCTCTTGTCTTTAAAAG
CTTCTTCTTTTTCCATTAATTCATCCAAGGCACGCCGACGAACTCCAGAAGCTGCTGTAG
TACGTGTGTCTTGTTTCTTTTCGGCACTAGATTTGGATTTTTCTTCACGTGCTTTTTTTT
CGGCAATCAAGAGCGGATTTGCAGTTCTTTCCTTTTTCGGACCCAATGTCATAAGGCTCT
GAGGTTTCTCCTCCGAAGAACTTGGGGAAGGATCAGGCTCTGTGCTTACCACCTGGACAG
GTGGCTTTTTTTGAGACAAAGAAATCTCCAGTTTAATTGGTTCATCTTCATTGGTGCGGA
CGAGAGGAGTGTATACGGGGCCTTCCGTCTGTTCAACTTTGTTGATATTGTGTTCTATTT
GACGCTCTAGAAACTGTTTGTTTATTTCATCTTCCGTCTTTTCCAAACGCTCACTCTGTT
CTTGTTTTTTTAACTTTTCTGGGTCGCGATCAATGTATTCGATAAACCACCCTTTCTCAG
TCTCATCTACCTTGCAAATTCCCTGTTTTCCAAGCCACATGCATAGTCCTGTGAGTGTAT
GCCATCTTGTCGCATTCATGTGTACATGTTCTTTGTCTTTGATATATTCTTGATAAACGA
CATTGGAATGCACGCGTTTCCCACCGAACTGTCGACGCAGTATATCGAGGTATCCTTTCA
AAAAGTCAGAAGAGAAACTGCTGATGAACTTTCCGCCGTCTTCAGCAAAGAGTTTCATTT
GCCTGTGGTGAGACTCAGACATCGTATGGCATTTATAACCATTTTCATCTCTGCACTGTT
TTTGACACATCTGACAATACCATCGTAGTTTCTGCAATCCTTTGGATTTGATTCTGTTGG
ATATAGCTTTTGGAGTTAGGAAACCTGTTTTTCT

consensusID : consensus_9857#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 759
fasta sequence

                              [TGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTGAAATATATCTGATTGTTATTTGGAAGTACTGTACATTATAAATGAACAACAGAAGCTTATATTACTAAAGATAACTGAAAAAAATTCTACCGTTCCTGTCTTGCTTCTGACAATTTGCAAATATCATCCAAAGAAACGTTCTTGACAAGACGACCCATACACAGACCGGTCATCACTGTTATTTCAC-ATATATTCTTTTCTTTAAAAACTTGCTCTAACGTAGCGTACTCTCCTCGGTATGCGCCATTAACGATGAGAACTGTTGATGATGGTTCAGGAATAACTGTTTGAACGTGATTTTGATCCACTTTGATCTTTGTGTGACATTCCACTGTCCTTACGATAGCCGTGTAATTATCCAGCATCTTCAAAACTGTGGCATGTCTCCAACGTAGATCATCAGGAAGTTTGCGATTGATTAGCTTGACTTCAATCCCTTCTGTCATCCAGTAATCTCTTCGGTTTCTCTTGTCTTTAAAAGCTTCTTCTTTTTCCATTAATTCATCCAAGGCACGCCGACGAACTCCA-GA-AGCTGCTGTAGTACGTGTGTCTTGGTTCTTT-TCGGCACTAGATTTGGATTTTTCTTCACGTGCTTTTTTTTCGGCAATCAAGAGCGGATTCTGAAAGTTAAAGTGTGTAAAATGTTAAGACGGTAAAACTGCAACAAGCACCACGATTGCAAGTGTAGAAATTAAGTTTAAAATTCAGCTTCAACAAAACA]

[+] EMBL AI067182             [TGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTGAAATATATCTGATTGTTATTTGGAAGTACTGTACATTATAAATGAACAACAGAAGCTTATATTACTAAAGATAACTGAAAAAAATTCTACCGTTCCTGTCTTGCTTCTGACAATTTGCAAATATCATCCAAAGAAACGTTCTTGACAAGACGACCCATACACAGACCGGTCATCACTGTTATTTCAC ATATATTCTTTTCTTTAAAAACTTGCTCTAACGTAGCGTACTCTCCTCGGTATGCGCCATTAACGATGAGAACTGTTGATGATGGTTCAGGAATAACTGTTTGAACGTGATTTTGATCCACTTTGATCTTTGTGTGACATTCCACTGTCCTTACGATAGCCGTGTAATTATCCAGCATCTTCAAAACTGTGGCATGTCTCCAACGTAGATCATCAGGAAGTTTGCGATTGATTAGCTTGACTTCAATCCCTTCTGTCATCCAGTAATCTCTTCGGTTTCTCTTGTCTTTAAAAGCTTCTTCTTTTTCCATTAATTCATCCAAGGCACGCCGACGAACTCCA GA AGCTGCTGTAGTACGTGTGTCTTGGTTCTTT TCGGCACTAGAT                                                                                                                                                    ]
[-] EMBL AI618803             [                                                                                                                                                                                                                      TGTTATTTCACAATA ATTCTTTTCTTT AAAACTTGCTCTAACGTAGCGTACTCTCCTCGGTATGCGCCATTAACGATGAGAACTGTTGATGATGGTTCAGGAATAACTGTTTGAACGTGATTTTGATCCACTTTGATCTTTGTGTGACATTCCACTGTCCTTACGATAGCCGTGTAATTATCCAGCATCTTCAAAATTGT GCATGTCTCCAACGTAGATCATCAGGAAGTTTGCGATTGATTAGCTTGACTTCAATCCCTTCTGTCATCCAGTAATCTCTTCGGTTTCTCTTGTCTTTAAAAGCTTCTTCTTTTTCCATTAATTCATCCAAGGCACGCCGACGAACTCCACGATTGCTGCTGTA                                                                                                                                                                                      ]
[-] EMBL CD084409             [                                                                                                                                                                                                                                                                   TAGCGTACTCTCCTCGGTATGCGCCATTAACGATGAGAACTGTTGATGATGGTTCAGGAATAACTGTTTGAACGTGATTTTGATCCACTTTGATCTTTGTGTGACATTCCACTGTCCTTACGATAGCCGTGTAATTATCCAGCATCTTCAAAACTGTGGCATGTCTCCAACGTAGATCATCAGGAAGTTTGCGATTGATTAGCTTGACTTCAATCCCTTCTGTCATCCAGTAATCTCTTCGGTTTCTCTTGTCTTTAAAAGCTTCTTCTTTTTCCATTAATTCATCCAAGGCACGCCGACGAACTCCA GA AGCTGCTGTAGTACGTGTGTCTTGTTTCTTTATCGGCACTAGATTTGGATTTTTCTTCACGTGCTTTTTTTTCGGCAATCAAGAGCGGATTCTGAAAGTTAAAGTGTGTAAAATGTTAAGACGGTAAAACTGCAACAAGCACCACGATTGCAAGTGTAGAAATTAAGTTTAAAATTCAGCTTCAACAAAACA]




>consensus_9857#1
TGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTGAAATATATCTGATTGTTATTTG
GAAGTACTGTACATTATAAATGAACAACAGAAGCTTATATTACTAAAGATAACTGAAAAA
AATTCTACCGTTCCTGTCTTGCTTCTGACAATTTGCAAATATCATCCAAAGAAACGTTCT
TGACAAGACGACCCATACACAGACCGGTCATCACTGTTATTTCACATATATTCTTTTCTT
TAAAAACTTGCTCTAACGTAGCGTACTCTCCTCGGTATGCGCCATTAACGATGAGAACTG
TTGATGATGGTTCAGGAATAACTGTTTGAACGTGATTTTGATCCACTTTGATCTTTGTGT
GACATTCCACTGTCCTTACGATAGCCGTGTAATTATCCAGCATCTTCAAAACTGTGGCAT
GTCTCCAACGTAGATCATCAGGAAGTTTGCGATTGATTAGCTTGACTTCAATCCCTTCTG
TCATCCAGTAATCTCTTCGGTTTCTCTTGTCTTTAAAAGCTTCTTCTTTTTCCATTAATT
CATCCAAGGCACGCCGACGAACTCCAGAAGCTGCTGTAGTACGTGTGTCTTGGTTCTTTT
CGGCACTAGATTTGGATTTTTCTTCACGTGCTTTTTTTTCGGCAATCAAGAGCGGATTCT
GAAAGTTAAAGTGTGTAAAATGTTAAGACGGTAAAACTGCAACAAGCACCACGATTGCAA
GTGTAGAAATTAAGTTTAAAATTCAGCTTCAACAAAACA

consensusID : consensus_9857#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 437
fasta sequence

                              [CGTTAGAGCAAGTTTTTAAAGAAAAGAATATATGTGAAATAACAGTGATGACCGTAAGATTTCTTATTAATGCTTTTAATGTTGCTTTACGTTCTCTTTTGACTCTAAATCTTCAAATGTTTGAATATTCTGTCCGGCAAACATTTCTCTCGAGCTTCTTAATGACTTATCGTAATCTAATTTCCAATTACTGCTTTTTTACTTTACATCATTTAATTGCAAGTGCCCCGTATTTTACATCTGAACTCTCAACTATGCTTGATTTTCGATCCGAAATTATTGCTAGTTCATGTACCACCTTTCTGTGTCTGAATCATATATTACCACTTTTCAGATTTTAATAGTGTTATGTTTTATGGACTGAATGGTTTAATCATGAGGCTTCCATCGACTTTCTTTGAGAAAACATTAGTACAGACTCCAAAACGTAGTTAGTT]

[+] EMBL CD201189             [CGTTAGAGCAAGTTTTTAAAGAAAAGAATATATGTGAAATAACAGTGATGACCGTAAGATTTCTTATTAATGCTTTTAATGTTGCTTTACGTTCTCTTTTGACTCTAAATCTTCAAATGTTTGAATATTCTGTCCGGCAAACATTTCTCTCGAGCTTCTTAATGACTTATCGTAATCTAATTTCCAATTACTGCTTTTTTACTTTACATCATTTAATTGCAAGTGCCCCGTATTTTACATCTGAACTCTCAACTATGCTTGATTTTCGATCCGAAATTATTGCTAGTTCATGTACCACCTTTCTGTGTCTGAATCATATATTACCACTTTTCAGATTTTAATAGTGTTATGTTTTATGGACTGAATGGTTTAATCATGAGGCTTCCATCGACTTTCTTTGAGAAAACATTAGTACAGACTCCAAAACGTAGTTAGTT]




>consensus_9857#2
CGTTAGAGCAAGTTTTTAAAGAAAAGAATATATGTGAAATAACAGTGATGACCGTAAGAT
TTCTTATTAATGCTTTTAATGTTGCTTTACGTTCTCTTTTGACTCTAAATCTTCAAATGT
TTGAATATTCTGTCCGGCAAACATTTCTCTCGAGCTTCTTAATGACTTATCGTAATCTAA
TTTCCAATTACTGCTTTTTTACTTTACATCATTTAATTGCAAGTGCCCCGTATTTTACAT
CTGAACTCTCAACTATGCTTGATTTTCGATCCGAAATTATTGCTAGTTCATGTACCACCT
TTCTGTGTCTGAATCATATATTACCACTTTTCAGATTTTAATAGTGTTATGTTTTATGGA
CTGAATGGTTTAATCATGAGGCTTCCATCGACTTTCTTTGAGAAAACATTAGTACAGACT
CCAAAACGTAGTTAGTT

consensusID : consensus_9857#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 433
fasta sequence

                              [ATCTGATTGGTATTTGGAAGTCCTGGCCATTTTAAATGAACAACAGAAGCTTATTTTACTAAAGATAACTGAAAAAAATTCTACCGGTCCTGGCTTGGTTTTGACAATTTGCAAATATCATCCAAAAAAACGTTTTTGACAAGACGACCCATACACAGACCGGGCATCACTGGTATTTCACATATATTCTTTTCTTTAAAAACTTGCTTTAACGTAGCGGACTTTCCTCGGGATGCCCCATTAACGATGAAAACTGGTGATGATGGGTCAGGAATAACTGGTTGAACGGGATTTTGATCCACTTTGATCTTTGGGGGACATTCCACTGGCCTTACGATAGCCGGGTAATTATCCAGCATTTTCAAAACTGGGGGATGGCTCCAACGTAAATCATCAGGAAGTTTGCGATTGATTAACTTGACTTCAATCCCTT]

[+] EMBL CD076331             [ATCTGATTGGTATTTGGAAGTCCTGGCCATTTTAAATGAACAACAGAAGCTTATTTTACTAAAGATAACTGAAAAAAATTCTACCGGTCCTGGCTTGGTTTTGACAATTTGCAAATATCATCCAAAAAAACGTTTTTGACAAGACGACCCATACACAGACCGGGCATCACTGGTATTTCACATATATTCTTTTCTTTAAAAACTTGCTTTAACGTAGCGGACTTTCCTCGGGATGCCCCATTAACGATGAAAACTGGTGATGATGGGTCAGGAATAACTGGTTGAACGGGATTTTGATCCACTTTGATCTTTGGGGGACATTCCACTGGCCTTACGATAGCCGGGTAATTATCCAGCATTTTCAAAACTGGGGGATGGCTCCAACGTAAATCATCAGGAAGTTTGCGATTGATTAACTTGACTTCAATCCCTT]




>consensus_9857#3
ATCTGATTGGTATTTGGAAGTCCTGGCCATTTTAAATGAACAACAGAAGCTTATTTTACT
AAAGATAACTGAAAAAAATTCTACCGGTCCTGGCTTGGTTTTGACAATTTGCAAATATCA
TCCAAAAAAACGTTTTTGACAAGACGACCCATACACAGACCGGGCATCACTGGTATTTCA
CATATATTCTTTTCTTTAAAAACTTGCTTTAACGTAGCGGACTTTCCTCGGGATGCCCCA
TTAACGATGAAAACTGGTGATGATGGGTCAGGAATAACTGGTTGAACGGGATTTTGATCC
ACTTTGATCTTTGGGGGACATTCCACTGGCCTTACGATAGCCGGGTAATTATCCAGCATT
TTCAAAACTGGGGGATGGCTCCAACGTAAATCATCAGGAAGTTTGCGATTGATTAACTTG
ACTTCAATCCCTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9857#1      TGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTGAAATATATCTGATTGTTATTTG 60
consensus_9857#3      --------------------------------------------ATCTGATTGGTATTTG 16
consensus_9857#0      ------------------------------------------------------------
consensus_9857#2      ------------------------------------------------------------
                                                                                  

consensus_9857#1      GAAGTACTGTACATTATAAATGAACAACAGAAGCTTATATTACTAAAGATAACTGAAAAA 120
consensus_9857#3      GAAGTCCTGGCCATTTTAAATGAACAACAGAAGCTTATTTTACTAAAGATAACTGAAAAA 76
consensus_9857#0      ------------------------------------------------------------
consensus_9857#2      ------------------------------------------------------------
                                                                                  

consensus_9857#1      AATTCTACCGTTCCTGTCTTGCTTCTGACAATTTGCAAATATCATCCAAAGAAACGTTCT 180
consensus_9857#3      AATTCTACCGGTCCTGGCTTGGTTTTGACAATTTGCAAATATCATCCAAAAAAACGTTTT 136
consensus_9857#0      ------------------------------------------------------------
consensus_9857#2      ------------------------------------------------------------
                                                                                  

consensus_9857#1      TGACAAGACGACCCATACACAGACCGGTCATCACTGTTATTTCACATATATTCTTTTCTT 240
consensus_9857#3      TGACAAGACGACCCATACACAGACCGGGCATCACTGGTATTTCACATATATTCTTTTCTT 196
consensus_9857#0      ---------------------------------------TCTCACATATAATCTTTTCTT 21
consensus_9857#2      ---------------------------------------CGTTAGAGCAAGTTTTTAAAG 21
                                                               * * *   * * ***    

consensus_9857#1      TAAAAACTTGCTCTAACGTAGC-GTACTCTCCTCGGTATGCGCCATTAACGATGAGAACT 299
consensus_9857#3      TAAAAACTTGCTTTAACGTAGC-GGACTTTCCTCGGGATGCCCCATTAACGATGAAAACT 255
consensus_9857#0      TAAGAACTTGCTCTAACGTAGC-GTACTCTCCTCGGTATGCGCCATTAACGATGAGAACT 80
consensus_9857#2      AAAAGAATATATGTGAAATAACAGTGATGACCGTAAGATTTCTTATTAATGCTTTTAA-T 80
                       **  * *   * * *  ** * *   *  **     **     ***** * *   ** *

consensus_9857#1      GTTGATGATGGTTCAGGAATAACTGTTTGAACGTGATTTTGATCCACTTTGATCTTTGTG 359
consensus_9857#3      GGTGATGATGGGTCAGGAATAACTGGTTGAACGGGATTTTGATCCACTTTGATCTTTGGG 315
consensus_9857#0      GTTGATGATGGTTCAGGAATAACTGTTTGAACGTGATTTTGATCCACTTTGATCTTTGTG 140
consensus_9857#2      GTTGCTTTACGTTCTCTTTTGACT--CTAAATCTTCAAATGTTTGAATATTCTGTCCGGC 138
                      * ** *    * **     * ***   * **        ** *  * * *  * *  *  

consensus_9857#1      TGACATTCCACT-GTCCTTACGATAGCCGTGTAATTATCCAGCATCTTCAAAACTGTGGC 418
consensus_9857#3      GGACATTCCACT-GGCCTTACGATAGCCGGGTAATTATCCAGCATTTTCAAAACTGGGGG 374
consensus_9857#0      TGACATTCCACT-GTCCTTACGATAGCCGTGTAATTATCCAGCATCTTCAAAACTGTGGC 199
consensus_9857#2      AAACATTTCTCTCGAGCTTCTTAATGACTTATCGTAATCTA--ATTTCCA--ATTACTGC 194
                        ***** * ** *  ***   *  * *   *  * *** *  ** * **  * *   * 

consensus_9857#1      ATGTCTCCAACGTAGATCATCAGGAAGTTTGCGATTGATTAGCTTGACTTCAATCCCTTC 478
consensus_9857#3      ATGGCTCCAACGTAAATCATCAGGAAGTTTGCGATTGATTAACTTGACTTCAATCCCTT- 433
consensus_9857#0      ATGTCTCCAACGTAGATCATCAGGAAGTTTGCGATTGATTAGCTTGACTTCAATCCATTC 259
consensus_9857#2      TT--TTTTACTTTACATCATTTAATTGCAAGTGCCCCGTATTTTACATCTGAACTCTCAA 252
                       *   *  *   ** *****      *   * *     *    *  *  * **  *    

consensus_9857#1      TGTCATCCAGTAATCTCTTCGGTTTCTCTTGTCTTTAAAAGCTTCTTCTTTTTCCATTAA 538
consensus_9857#3      ------------------------------------------------------------
consensus_9857#0      TGTCATCCAGTAATCTCTTCGGTTTCTCTTGTCTTTAAAAGCTTCTTCTTTTTCCATTAA 319
consensus_9857#2      CTATGCTTGATTTTCGATCCGAAATTATTGCTAGTTCATGTACCACCTTTCTGTGTCTGA 312
                                                                                  

consensus_9857#1      TTCATCCAAGGCACGCCGACGAACTCCAGAAGCTGCTGTAGTACGTGTGTCTTGGTTCTT 598
consensus_9857#3      ------------------------------------------------------------
consensus_9857#0      TTCATCCAAGGCACGCCGACGAACTCCAGAAGCTGCTGTAGTACGTGTGTCTTGTTTCTT 379
consensus_9857#2      ATCATATATTACCACTTTTCAGATTTTAATAG-TGTTATGTTT--TATGGACTGAATGGT 369
                                                                                  

consensus_9857#1      TTCGGCACTAGATTTGGATT---TTTCTTCACGTGCTTTTTTTTCGGCAATCAAGAGCGG 655
consensus_9857#3      ------------------------------------------------------------
consensus_9857#0      TTCGGCACTAGATTTGGATT---TTTCTTCACGTGCTTTTTTTTCGGCAATCAAGAGCGG 436
consensus_9857#2      TTAATCATGAGGCTTCCATCGACTTTCTTTGAGAAAACATTAGTACAGACTCCAAAACGT 429
                                                                                  

consensus_9857#1      ATTCTGAAAGTTAAAGTGTGTAAAATGTTAAGACGGTAAAACTGCAACAAGCACCACGAT 715
consensus_9857#3      ------------------------------------------------------------
consensus_9857#0      ATTTGCAGTTCTTTCCTTTTTCGGACCCAATGTCATAAGGCTCTGAGGTTTCTCCTCCGA 496
consensus_9857#2      AGTTAGTT---------------------------------------------------- 437
                                                                                  

consensus_9857#1      TGCAAGTGTAGAA--ATTAAGTTTAAAATTCAGCTTCAACAAAACA-------------- 759
consensus_9857#3      ------------------------------------------------------------
consensus_9857#0      AGAACTTGGGGAAGGATCAGGCTCTGTGCTTACCACCTGGACAGGTGGCTTTTTTTGAGA 556
consensus_9857#2      ------------------------------------------------------------
                                                                                  

consensus_9857#1      ------------------------------------------------------------
consensus_9857#3      ------------------------------------------------------------
consensus_9857#0      CAAAGAAATCTCCAGTTTAATTGGTTCATCTTCATTGGTGCGGACGAGAGGAGTGTATAC 616
consensus_9857#2      ------------------------------------------------------------
                                                                                  

consensus_9857#1      ------------------------------------------------------------
consensus_9857#3      ------------------------------------------------------------
consensus_9857#0      GGGGCCTTCCGTCTGTTCAACTTTGTTGATATTGTGTTCTATTTGACGCTCTAGAAACTG 676
consensus_9857#2      ------------------------------------------------------------
                                                                                  

consensus_9857#1      ------------------------------------------------------------
consensus_9857#3      ------------------------------------------------------------
consensus_9857#0      TTTGTTTATTTCATCTTCCGTCTTTTCCAAACGCTCACTCTGTTCTTGTTTTTTTAACTT 736
consensus_9857#2      ------------------------------------------------------------
                                                                                  

consensus_9857#1      ------------------------------------------------------------
consensus_9857#3      ------------------------------------------------------------
consensus_9857#0      TTCTGGGTCGCGATCAATGTATTCGATAAACCACCCTTTCTCAGTCTCATCTACCTTGCA 796
consensus_9857#2      ------------------------------------------------------------
                                                                                  

consensus_9857#1      ------------------------------------------------------------
consensus_9857#3      ------------------------------------------------------------
consensus_9857#0      AATTCCCTGTTTTCCAAGCCACATGCATAGTCCTGTGAGTGTATGCCATCTTGTCGCATT 856
consensus_9857#2      ------------------------------------------------------------
                                                                                  

consensus_9857#1      ------------------------------------------------------------
consensus_9857#3      ------------------------------------------------------------
consensus_9857#0      CATGTGTACATGTTCTTTGTCTTTGATATATTCTTGATAAACGACATTGGAATGCACGCG 916
consensus_9857#2      ------------------------------------------------------------
                                                                                  

consensus_9857#1      ------------------------------------------------------------
consensus_9857#3      ------------------------------------------------------------
consensus_9857#0      TTTCCCACCGAACTGTCGACGCAGTATATCGAGGTATCCTTTCAAAAAGTCAGAAGAGAA 976
consensus_9857#2      ------------------------------------------------------------
                                                                                  

consensus_9857#1      ------------------------------------------------------------
consensus_9857#3      ------------------------------------------------------------
consensus_9857#0      ACTGCTGATGAACTTTCCGCCGTCTTCAGCAAAGAGTTTCATTTGCCTGTGGTGAGACTC 1036
consensus_9857#2      ------------------------------------------------------------
                                                                                  

consensus_9857#1      ------------------------------------------------------------
consensus_9857#3      ------------------------------------------------------------
consensus_9857#0      AGACATCGTATGGCATTTATAACCATTTTCATCTCTGCACTGTTTTTGACACATCTGACA 1096
consensus_9857#2      ------------------------------------------------------------
                                                                                  

consensus_9857#1      ------------------------------------------------------------
consensus_9857#3      ------------------------------------------------------------
consensus_9857#0      ATACCATCGTAGTTTCTGCAATCCTTTGGATTTGATTCTGTTGGATATAGCTTTTGGAGT 1156
consensus_9857#2      ------------------------------------------------------------
                                                                                  

consensus_9857#1      ------------------
consensus_9857#3      ------------------
consensus_9857#0      TAGGAAACCTGTTTTTCT 1174
consensus_9857#2      ------------------