cluster # 9908

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 9908 cluster # 9908 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9908#0 length = 990 sequences # 9

consensus_9908#1 length = 658 sequences # 2
consensus_9908#2 length = 575 sequences # 1

consensusID : consensus_9908#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 990
fasta sequence

                              [GAGGCCAAAAATTCGGCACGAGGA--AAAAACTAGCTATTC-CAATGGCGATTCTTAATGACTTATCTAGATGCATTGTGGCCGTGTCATATGCACTGCTTTTGGTTGCTTCAGTAATACTTATAGCTATTGGGGGGAG-CATACTTGTAATTGCTGCGCGTTACAAACACGTTGTGACTGTGACAAACTTACAATTTCCTGGTTATATTGTGCTGGGCACAGGATTATTGCTCCTGTGTGCTGGAGTGATTGGTTTCATAGCCTGCATAAAACATAGTCGCTGTCTACTTGTGTTGTTGTATGTATTATTGCTCACTATTTTACTATGTAAACTGGCTGTTATCATCGTTTCTATATTTTACTGGCCAAAAATTAGAGAACAAATAAGTGGAGTACTTCATGAAGATCTGAGGATGTATGATAAAGTTGCTGAAGTTCGACAGATTGTCGATTTTATCCAGTCAAATTTTGAGTGTTGTGGAGTGGAAAATCAGTCAGATTGGAAATTTTACAATAACGGCAGTTATCCTCAAAGTTGTTGTAAAAATCGTCAGCTAGAAGGACCGTTTAGCGATAAAGAGTGTATCTATTATCAGTATGGCTGTCTCAATTTCTTGGAACGTGAAGTTAAGAGATATTTGGGTTATGTCATTGGATCCGCATGTACCTTTTTCTTGTTGCAACTCATTGGTTTGCACAGCATGTGCGTTGTGATTTGTCGGTCTCAGTCGATTCATCGTTGGCAGAATGAGGGTTATATTAGTATATAATCTATCGTGATTAAGTTCATGGTTAATTTTGGGTACTAAAGTGTTTTGTATTTCTACAAAGGAGGTATGTTGGATTCGTAGTGCTCCCTACCCAAGCTAAATACCCTGCCTCTTTGCACATAGATCATTCGTTGATTTCACTGACAAACCATTCAGGAGGACTATTGTACGCTTATTCATTTTATTGTTTATAATTCTATATCTATTTTATAATCAAATACAT]

[+] EMBL CD080160             [GAGGCCAAAAATTCGGCACGAGGA  AAAAACTAGCTATTC CAATGGCGATTCTTAATGACTTATCTAGATGTATTGTGGCCGTGTCATATGCACTGCTTTTGGTTGCTTCAGTAATACTTATAGCTATTGGGGGGAG CATACTTGTAATTGCTGCGCGTTACAAACACGTTGTGACTGTGACAAACTTACAATTTCCTGGTTATATTGTGCTGGGCACAGGATTATTGCTCCTGTGTGCTGGAGTGATTGGTTTCATAGCCTGCATAAAACATAGTCGCTGTCTACTTGTGTTGTTGTATGTATTATTGCTCACTATTTTACTATGTAAACTGGCTGTTATCATCGTTTCTATATTTTACTGGCCAAAAATTAAAGAACAAATAAGTGGAGTACTTCATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD082388             [               gtACGAGGACCAAAAACTAGCTATTCACAATGGCGATTCTTTTTGACTTATCTAGATGCATTGTGGCCGTGTCATATGCACTGCTTTTGGTTGCTTCAGTAATACTTATAGCTATTGGGGGGAG CATACTTGTAATTGCTGCGCGTTACAAACACGTTGTGACTGTGACAAACTTACAATTTCCTGGTTATATTGTGCTGGGCACAGGATTATTGCTCCTGTGTGCTGGAGTGATTGGTTTCATAGCCTGCATAAAACATAGTCGCTGTCTACTTGTGTTGTTGTATGTATTATTGCTCACTATTTTACTATGTAAACTGGCTGTTATCATCGTTTCTATATTTTACTGGCCAAAAATTAGAGAACAAATAAGTGGAGTACTTCATGAAGATCTGAGGATGTATGATAAAGTTGCTGAAGTTCGACAGATTGTCGATTTTATCCAGTCAAATTTTGAGTGTTGTGGAGTGGAAAATCAGTCAGATTGGAAATTTTACAATAACGGCAGTTATCCTCAAAGTTGTTGTAAAAATCGTCAGCTAGAAGGACCGTTTAGCGATAAAGAGTGTATCTATTATCAGTATGGCTGTCTCAATTTCTTGGAACGTGAAGTTAAGAGATATTTGGGTTATGTCATTGGATCCGCATGTACCTTTTTCTTGTT                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD154043             [                                                                      ATGCATTGTGGCCGTGTCATATGCACTGCTTTTGGTTGCTTCAGTAATACTTATAGCTATT GGGGGAGNCATACTTGTAATTGCTGCGCGTTACAAACACGTTGTGACTGTGACAAACTTACAATTTCCTGGTTATATTGTGCTGGGCACAGGATTATTGCTCCTGTGTGCTGGAGTGATTGGTTTCATAGCCTGCATAAAACATAGTCGCTGTCTACTTGTGTTGTTGTATGTATTATTGCTCACTATTTTACTATGTAAACTGGCTGTTATCATCGTTTCTATATTTTACTGGCCAAAAATTAGAGAACAAATAAGTGGAGTACTTCATGAAGATCTGAGGATGTATGATAAAGTTGCTGAAGTTCGACAGATTGTCGATTTTATCCAGTCAAATTTTGAGTGTTGTGGAGTGGAAAATCAGTCAGATTGGAAATTTTACAATAACGGCAGTTATCCTCAAAGTTGTTGTAAAAATCGTCAGCTAGAAGGACCGTTTAGCGATAAAGAGTGTATCTATTATCAGTATGGCTGTCTCA                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD189215             [                                                                                                                                                                              GTGACTGTGACAAACTANCAATTTCCTGGTTATATTGTGCTGGGCACAGGATTATTGCTCCTGTGTGCTGGAGTGATTGGTNTCATAGCCTGCATAAAACATAGTCGCTGTCTACTTGTGTTGTTGTATGTATTATTGCTCACTATTTTACTATGTAAACTGGCTGTTATCATCGTTTCTATATTTTACTGGCCAAAAATTAGAGAACAAATAAGTGGAGTACTTCATGAAGATCTGAGGATGTATGATAAAGTTGCTGAAGTTCGACAGATTGTCGATTTTATCCAGTCAAATTTTGAGTGTTGTGGAGTGGAAAATCAGTCAGATTGGAAATTTTACAATAACGGCAGTTATCCTCAAAGTTGTTGTAAAAATCGTCAGCTAGAAGGACCGTTTAGCGATAAAGAGTGTATCTATTATCAGTATGGCTGTCTCAATTTCTTGGAACGTGAAGTTAAGAGATATTTGGGTTATGTCATTGGATCCGCATGTACCTTTTTCTTGTTGCAAggcgtc                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD074828             [                                                                                                                                                                                                                                                                                                                                                                              CCAANAATTAGAGAACAAATAAGTGGAGTACTTCATGAAGATCTGAGGATGTATGATAAAGTTGCTGAAGTTCGACAGATTGTCGATTTTATCCAGTCAAATTTTGAGTGTTGTGGAGTGGAAAATCAGTCAGATTGGAAATTTTACAATAACGGCAGTTATCCTCAAAGTTGTTGTAAAAATCGTCAGCTAGAAGGACCGTTTAGCGATAAAGAGTGTATCTATTATCAGTATGGCTGTCTCAATTTCTTGGAACGTGAAGTTAAGAGATATTTGGGTTATGTCATTGGATCCGCATGTACCTTTTTCTTGTTGCAACTCATTGGTTTGCACAGCATGTGCGTTGTGATTTGTCGGTCTCAGTCGATTCATCGTTGGCAGAATGAGGGTTATATTAGTATATAATCTATCGTGATTAAGTTCATGGTTAATTTTGGGTACTAAAGTGTTTTGTATTTCTACAAAGGAGGTATGTTGGATTCGTAGTGCTCCCTACCCAAGCTAAATACCCTGCCTCTTTGCACATAGATCATTCGTTGATTTCACTGACAAACCATTCAGGAGGACTATTGTACGCTTATTCATTTTATTGTTTATAATTCTATATCTATTTTATAATCAAATACAT]
[+] EMBL CD193438             [                                                                                                                                                                                                                                                                                                                                                                                                                                     ATAAAGTTGCTGAAGTTCGACAGATTGTCGATTTTATCCAGTCAAATTTTGAGTGTTGTGGAGTGGAAAATCAGTCAGATTGGAAATTTTACAATAACGGCAGTTATCCTCAAAGTTGTTGTAAAAATCGTCAGCTAGAAGGACCGTTTAGCGATAAAGAGTGTATCTATTATCAGTATGGCTGTCTCAATTTCTTGGAACGTGAAGTTAAGAGATATTTGGGTTATGTCATTGGATCCGCATGTACCTTTTTCTTGTTGCAACTCATTGGTTTGCACAGCATGTGCGTTGTGATTTGTCGGTCTCAGTCGATTCATCGTTGGCAGAATGAGGGTTATATTAGTATATAATCTATCGTGATTAAGTTCATGGTTAATTTTGGGTACTAAAGTGTTTTGTATTTCTACAAAGGAGGTAT                                                                                                                                                           ]
[+] EMBL CD193473             [                                                                                                                                                                                                                                                                                                                                                                                                                                     ATAAAGTTGCTGAAGTTCGACAGATTGTCGATTTTATCCAGTCAAATTTTGAGTGTTGTGGAGTGGAAAATCAGTCAGATTGGAAATTTTACAATAACGGCAGTTATCCTCAAAGTTGTTGTAAAAATCGTCAGCTAGAAGGACCGTTTAGCGATAAAGAGTGTATCTATTATCAGTATGGCTGTCTCAATTTCTTGGAACGTGAAGTTAAGAGATATTTGGGTTATGTCATTGGATCCGCATGTACCTTTTTCTTGTTGCAACTCATTGGTTTGCACAGCATGTGCGTTGTGATTTG                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD193530             [                                                                                                                                                                                                                                                                                                                                                                                                                                     ATAAAGTTGCTGAAGTTCGACAGATTGTCGATTTTATCCAGTCAAATTTTGAGTGTTGTGGAGTGGAAAATCAGTCAGATTGGAAATTTTACAATAACGGCAGTTATCCTCAAAGTTGTTGTAAAAATCGTCAGCTAGAAGGACCGTTTAGCGATAAAGAGTGTATCTATTATCAGTATGGCTGTCTCAATTTCTTGGAACGTGAAGTTAAGAGATATTTGGGTTATGTCATTGGATCCGCATGTACCTTTTTCTTGTTGCAACTCATTGGTTTGCACAGCATGTGCGTTGTGATTTG                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD136018             [                                                                                                                                                                                                                                                                                                                                                                                                                                      TAAAGTTGCTGAAGTTCGACAGATTGTCGATTTTATCCAGTCAAATTTTGAGTGTTGTGGAGTGGAAAATCAGTCAGATTGGAAATTTTACAATAACGGCAGTTATCCTCAAAGTTGTTGTAAAAATCGTCAGCTAGAAGGATCGTTTAGCGATAAAGAGTGTATCTATTATCAGTGTGGCTGTCTCAATTTCTTGGAACGTGAAGTTAAGAGATATTTGGGTTATGTCATTTGATCCGCATGTACCTTTTTCTTGTTGCAACTCATCGGTTTGCACAGCATGTGCGTTGTGATTTGT                                                                                                                                                                                                                                                                                  ]




>consensus_9908#0
GAGGCCAAAAATTCGGCACGAGGAAAAAACTAGCTATTCCAATGGCGATTCTTAATGACT
TATCTAGATGCATTGTGGCCGTGTCATATGCACTGCTTTTGGTTGCTTCAGTAATACTTA
TAGCTATTGGGGGGAGCATACTTGTAATTGCTGCGCGTTACAAACACGTTGTGACTGTGA
CAAACTTACAATTTCCTGGTTATATTGTGCTGGGCACAGGATTATTGCTCCTGTGTGCTG
GAGTGATTGGTTTCATAGCCTGCATAAAACATAGTCGCTGTCTACTTGTGTTGTTGTATG
TATTATTGCTCACTATTTTACTATGTAAACTGGCTGTTATCATCGTTTCTATATTTTACT
GGCCAAAAATTAGAGAACAAATAAGTGGAGTACTTCATGAAGATCTGAGGATGTATGATA
AAGTTGCTGAAGTTCGACAGATTGTCGATTTTATCCAGTCAAATTTTGAGTGTTGTGGAG
TGGAAAATCAGTCAGATTGGAAATTTTACAATAACGGCAGTTATCCTCAAAGTTGTTGTA
AAAATCGTCAGCTAGAAGGACCGTTTAGCGATAAAGAGTGTATCTATTATCAGTATGGCT
GTCTCAATTTCTTGGAACGTGAAGTTAAGAGATATTTGGGTTATGTCATTGGATCCGCAT
GTACCTTTTTCTTGTTGCAACTCATTGGTTTGCACAGCATGTGCGTTGTGATTTGTCGGT
CTCAGTCGATTCATCGTTGGCAGAATGAGGGTTATATTAGTATATAATCTATCGTGATTA
AGTTCATGGTTAATTTTGGGTACTAAAGTGTTTTGTATTTCTACAAAGGAGGTATGTTGG
ATTCGTAGTGCTCCCTACCCAAGCTAAATACCCTGCCTCTTTGCACATAGATCATTCGTT
GATTTCACTGACAAACCATTCAGGAGGACTATTGTACGCTTATTCATTTTATTGTTTATA
ATTCTATATCTATTTTATAATCAAATACAT

consensusID : consensus_9908#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 658
fasta sequence

                              [AATTTTTAGTGAATTTGGAAATATCAAACGTTCTTATTAAAAAACTAGCTATTCACAATGGCGATTCTTAATGACTTATCTA-GATGCATTGTGGCCGTGTCATATGCACTGCTTTTGGTTGCTTCAGTAATACTTATAGCTATTGGGGGGAGCATACTTGTAATTGCTGCGCGTTACAAACACGTTGTGACTGTGACAAACTTACAATTTCCTGGTTATATCGTGCTGGGCACAGGATTATTGCTCCTGTGTGCTGGAGTGATTGGTTTCATAGCCTGCATAAAACATAGTCGCTGTCTACTTGTGTTGTTGTATGTATTATTGCTCACTATTTTACTATGTAAACTGGCTGTTATCATCGTTTCTATATTTTACTGGCCAAAAATTAGAGAACAAATAAGTGGAGTACTTCATGAAGATCTGAGGATGTATGATAAGGTTGCTGAAGTTCGACAGATTGTCGATTTTATCCAGTCAAATGTAAACTGAAGTTTTGCAAATTCATCCTGTATTCTAGTTTGAGTGTTGTGGAGTGGAAAATCAGTCAGATTGGAAATTTTACAATAACGGCAGTTATCCCTCAAGTTGTTGTAAAAATCGTCAGCTAGAAGGACCGTTTTAGCGATAAGAGTGTATCTATTATCAGTATGGCTGTCTC]

[+] EMBL CD115765             [AATTTTTAGTGAATTTGGAAATATCAAACGTTCTTATTAAAAAACTAGCTATTCACAATGGCGATTCTTAATGACTTATCTA GATGCATTGTGGCCGTGTCATATGCACTGCTTTTGGTTGCTTCAGTAATACTTATAGCTATTGGGGGGAGCATACTTGTAATTGCTGCGCGTTACAAACACGTTGTGACTGTGACAAACTTACAATTTCCTGGTTATATCGTGCTGGGCACAGGATTATTGCTCCTGTGTGCTGGAGTGATTGGTTTCATAGCCTGCATAAAACATAGTCGCTGTCTACTTGTGTTGTTGTATGTATTATTGCTCACTATTTTACTATGTAAACTGGCTGTTATCATCGTTTCTATATTTTACTGGCCAAAAATTAGAGAACAAATAAGTGGAGTACTTCATGAAGATCTGAGGATGTATGATAAGGTTGCTGAAGTTCGACAGATTGTCGATTTTATCCAGTCAAATGTAAACTGAAGTTTTGCAAATTCATCCTGTATTCTAGTTTGAGTGTTGTGGAGTGGAAAATCAGTCAGATTGGAAATTTTACAATAACGGCAGTTATCCCTCAAGTTGTTGTAAAAATCGTCAGCTAGAAGGACCGTTTTAGCGATAAGAGTGTATCTATTATCAGTATGGCTGTCTC]
[+] EMBL AA629495             [   cacgAGGGAATTTGGAAATATCAAACGTTCTTATTAAAAAACTANCTATTCACAATGGCGATNCTTAATGACTTATCTAGGATGCATTGTGGCCGTGTCATATGCACTGCTTTTGGTTGCTTCAGTAATACTTATAGCTATTGGGGGGAGCATACTTGTAATTGCTGCNCGTNACAAACACNTTGTGACTGTGACAAACTTACAATTTCCTGGTTATATTGTGCTGGGCACAGGATTATTGCTCCTGTGTGCTGGAGTGATTGGTTT                                                                                                                                                                                                                                                                                                                                                                                                     ]




>consensus_9908#1
AATTTTTAGTGAATTTGGAAATATCAAACGTTCTTATTAAAAAACTAGCTATTCACAATG
GCGATTCTTAATGACTTATCTAGATGCATTGTGGCCGTGTCATATGCACTGCTTTTGGTT
GCTTCAGTAATACTTATAGCTATTGGGGGGAGCATACTTGTAATTGCTGCGCGTTACAAA
CACGTTGTGACTGTGACAAACTTACAATTTCCTGGTTATATCGTGCTGGGCACAGGATTA
TTGCTCCTGTGTGCTGGAGTGATTGGTTTCATAGCCTGCATAAAACATAGTCGCTGTCTA
CTTGTGTTGTTGTATGTATTATTGCTCACTATTTTACTATGTAAACTGGCTGTTATCATC
GTTTCTATATTTTACTGGCCAAAAATTAGAGAACAAATAAGTGGAGTACTTCATGAAGAT
CTGAGGATGTATGATAAGGTTGCTGAAGTTCGACAGATTGTCGATTTTATCCAGTCAAAT
GTAAACTGAAGTTTTGCAAATTCATCCTGTATTCTAGTTTGAGTGTTGTGGAGTGGAAAA
TCAGTCAGATTGGAAATTTTACAATAACGGCAGTTATCCCTCAAGTTGTTGTAAAAATCG
TCAGCTAGAAGGACCGTTTTAGCGATAAGAGTGTATCTATTATCAGTATGGCTGTCTC

consensusID : consensus_9908#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 575
fasta sequence

                              [GAGGGGAAGATCCAAGGGTCGCGCCTTCTTTTAAACAACAGTTTTACAGCCAATGATGGATGCTTCGATGATCCTTGAGGCATGAGGTTCCCATCCTATAAGTGCTTTTCGTGCTTGGNNNNNNNNNNNNNNNNNNNNNNNNGAATTTGGAAATATCAAACGTTCTTATTAAAAAACTAGCTATTCACAATGGCGATTCTTAATGACTTATCTAGATGCATTGTGGCCGTGTCATATGCACTGCTTTTGGTTGCTTCAGTAATACTTGTAATTGCTGCGCGTTACAAACACGTTGTGACTGTGACAAACTTACAATTTCCTGGTTATATTGTGCTGGGCACAGGATTATTGCTCCTGTGTGCTGGAGTGATTGGTTTCATAGCCTGCATNNNNNNNNNNNNNNNNNNNNNNNNTGTTGTTGTATGTATTATTGCTCACTATTTTACTATGTAAACTGGCTGTTATCATCGTTTCTATATTTTACTGGCCAAAAATTAGAGAACAAATAAGTGGAGTACTTCATGAAGATCTGAGGATGTATGATAAAGTTGCGTAAATTNTGAGTGGTGTGGAGT]

[+] EMBL CD081002             [GAGGGGAAGATCCAAGGGTCGCGCCTTCTTTTAAACAACAGTTTTACAGCCAATGATGGATGCTTCGATGATCCTTGAGGCATGAGGTTCCCATCCTATAAGTGCTTTTCGTGCTTGGNNNNNNNNNNNNNNNNNNNNNNNNGAATTTGGAAATATCAAACGTTCTTATTAAAAAACTAGCTATTCACAATGGCGATTCTTAATGACTTATCTAGATGCATTGTGGCCGTGTCATATGCACTGCTTTTGGTTGCTTCAGTAATACTTGTAATTGCTGCGCGTTACAAACACGTTGTGACTGTGACAAACTTACAATTTCCTGGTTATATTGTGCTGGGCACAGGATTATTGCTCCTGTGTGCTGGAGTGATTGGTTTCATAGCCTGCATNNNNNNNNNNNNNNNNNNNNNNNNTGTTGTTGTATGTATTATTGCTCACTATTTTACTATGTAAACTGGCTGTTATCATCGTTTCTATATTTTACTGGCCAAAAATTAGAGAACAAATAAGTGGAGTACTTCATGAAGATCTGAGGATGTATGATAAAGTTGCGTAAATTNTGAGTGGTGTGGAGT]




>consensus_9908#2
GAGGGGAAGATCCAAGGGTCGCGCCTTCTTTTAAACAACAGTTTTACAGCCAATGATGGA
TGCTTCGATGATCCTTGAGGCATGAGGTTCCCATCCTATAAGTGCTTTTCGTGCTTGGNN
NNNNNNNNNNNNNNNNNNNNNNGAATTTGGAAATATCAAACGTTCTTATTAAAAAACTAG
CTATTCACAATGGCGATTCTTAATGACTTATCTAGATGCATTGTGGCCGTGTCATATGCA
CTGCTTTTGGTTGCTTCAGTAATACTTGTAATTGCTGCGCGTTACAAACACGTTGTGACT
GTGACAAACTTACAATTTCCTGGTTATATTGTGCTGGGCACAGGATTATTGCTCCTGTGT
GCTGGAGTGATTGGTTTCATAGCCTGCATNNNNNNNNNNNNNNNNNNNNNNNNTGTTGTT
GTATGTATTATTGCTCACTATTTTACTATGTAAACTGGCTGTTATCATCGTTTCTATATT
TTACTGGCCAAAAATTAGAGAACAAATAAGTGGAGTACTTCATGAAGATCTGAGGATGTA
TGATAAAGTTGCGTAAATTNTGAGTGGTGTGGAGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9908#0      ------------------------------------------------------------
consensus_9908#1      ------------------------------------------------------------
consensus_9908#2      GAGGGGAAGATCCAAGGGTCGCGCCTTCTTTTAAACAACAGTTTTACAGCCAATGATGGA 60
                                                                                  

consensus_9908#0      ------------------------------------------------------------
consensus_9908#1      ------------------------------------------------------------
consensus_9908#2      TGCTTCGATGATCCTTGAGGCATGAGGTTCCCATCCTATAAGTGCTTTTCGTGCTTGGNN 120
                                                                                  

consensus_9908#0      ----------------------GAGGCCAAAAATTCGGCACG-----AGGAAAAAACTAG 33
consensus_9908#1      ------------AATTTTTAGTGAATTTGGAAATATCAAACGTTCTTATTAAAAAACTAG 48
consensus_9908#2      NNNNNNNNNNNNNNNNNNNNNNGAATTTGGAAATATCAAACGTTCTTATTAAAAAACTAG 180
                                            **      ****     ***     *  **********

consensus_9908#0      CTATTC-CAATGGCGATTCTTAATGACTTATCTAGATGCATTGTGGCCGTGTCATATGCA 92
consensus_9908#1      CTATTCACAATGGCGATTCTTAATGACTTATCTAGATGCATTGTGGCCGTGTCATATGCA 108
consensus_9908#2      CTATTCACAATGGCGATTCTTAATGACTTATCTAGATGCATTGTGGCCGTGTCATATGCA 240
                      ****** *****************************************************

consensus_9908#0      CTGCTTTTGGTTGCTTCAGTAATACTTATAGCTATTGGGGGGAGCATACTTGTAATTGCT 152
consensus_9908#1      CTGCTTTTGGTTGCTTCAGTAATACTTATAGCTATTGGGGGGAGCATACTTGTAATTGCT 168
consensus_9908#2      CTGCTTTTGGTTGCTTCAGTAATACTT------------------------GTAATTGCT 276
                      ***************************                        *********

consensus_9908#0      GCGCGTTACAAACACGTTGTGACTGTGACAAACTTACAATTTCCTGGTTATATTGTGCTG 212
consensus_9908#1      GCGCGTTACAAACACGTTGTGACTGTGACAAACTTACAATTTCCTGGTTATATCGTGCTG 228
consensus_9908#2      GCGCGTTACAAACACGTTGTGACTGTGACAAACTTACAATTTCCTGGTTATATTGTGCTG 336
                      ***************************************************** ******

consensus_9908#0      GGCACAGGATTATTGCTCCTGTGTGCTGGAGTGATTGGTTTCATAGCCTGCATAAAACAT 272
consensus_9908#1      GGCACAGGATTATTGCTCCTGTGTGCTGGAGTGATTGGTTTCATAGCCTGCATAAAACAT 288
consensus_9908#2      GGCACAGGATTATTGCTCCTGTGTGCTGGAGTGATTGGTTTCATAGCCTGCATNNNNNNN 396
                      *****************************************************       

consensus_9908#0      AGTCGCTGTCTACTTGT-GTTGTTGTATGTATTATTGCTCACTATTTTACTATGTAAACT 331
consensus_9908#1      AGTCGCTGTCTACTTGT-GTTGTTGTATGTATTATTGCTCACTATTTTACTATGTAAACT 347
consensus_9908#2      NNNNNNNNNNNNNNNNNTGTTGTTGTATGTATTATTGCTCACTATTTTACTATGTAAACT 456
                                        ******************************************

consensus_9908#0      GGCTGTTATCATCGTTTCTATATTTTACTGGCCAAAAATTAGAGAACAAATAAGTGGAGT 391
consensus_9908#1      GGCTGTTATCATCGTTTCTATATTTTACTGGCCAAAAATTAGAGAACAAATAAGTGGAGT 407
consensus_9908#2      GGCTGTTATCATCGTTTCTATATTTTACTGGCCAAAAATTAGAGAACAAATAAGTGGAGT 516
                      ************************************************************

consensus_9908#0      ACTTCATGAAGATCTGAGGATGTATGATAAAGTTGCTGAAGTTCGACAGATTGTCGATTT 451
consensus_9908#1      ACTTCATGAAGATCTGAGGATGTATGATAAGGTTGCTGAAGTTCGACAGATTGTCGATTT 467
consensus_9908#2      ACTTCATGAAGATCTGAGGATGTATGATAAAGTTGCGTAAATTNTGAGTGGTGTGGAGT- 575
                      ****************************** *****  ** **        *** ** * 

consensus_9908#0      TATCCAGTCAAAT-------------------------------------TTTGAGTGTT 474
consensus_9908#1      TATCCAGTCAAATGTAAACTGAAGTTTTGCAAATTCATCCTGTATTCTAGTTTGAGTGTT 527
consensus_9908#2      ------------------------------------------------------------
                                                                                  

consensus_9908#0      GTGGAGTGGAAAATCAGTCAGATTGGAAATTTTACAATAACGGCAGTTATCCTCAAAGTT 534
consensus_9908#1      GTGGAGTGGAAAATCAGTCAGATTGGAAATTTTACAATAACGGCAGTTATCCCTCAAGTT 587
consensus_9908#2      ------------------------------------------------------------
                                                                                  

consensus_9908#0      GTTGTAAAAATCGTCAGCTAGAAGGACCGTTT-AGCGATAAAGAGTGTATCTATTATCAG 593
consensus_9908#1      GTTGTAAAAATCGTCAGCTAGAAGGACCGTTTTAGCGATAA-GAGTGTATCTATTATCAG 646
consensus_9908#2      ------------------------------------------------------------
                                                                                  

consensus_9908#0      TATGGCTGTCTCAATTTCTTGGAACGTGAAGTTAAGAGATATTTGGGTTATGTCATTGGA 653
consensus_9908#1      TATGGCTGTCTC------------------------------------------------ 658
consensus_9908#2      ------------------------------------------------------------
                                                                                  

consensus_9908#0      TCCGCATGTACCTTTTTCTTGTTGCAACTCATTGGTTTGCACAGCATGTGCGTTGTGATT 713
consensus_9908#1      ------------------------------------------------------------
consensus_9908#2      ------------------------------------------------------------
                                                                                  

consensus_9908#0      TGTCGGTCTCAGTCGATTCATCGTTGGCAGAATGAGGGTTATATTAGTATATAATCTATC 773
consensus_9908#1      ------------------------------------------------------------
consensus_9908#2      ------------------------------------------------------------
                                                                                  

consensus_9908#0      GTGATTAAGTTCATGGTTAATTTTGGGTACTAAAGTGTTTTGTATTTCTACAAAGGAGGT 833
consensus_9908#1      ------------------------------------------------------------
consensus_9908#2      ------------------------------------------------------------
                                                                                  

consensus_9908#0      ATGTTGGATTCGTAGTGCTCCCTACCCAAGCTAAATACCCTGCCTCTTTGCACATAGATC 893
consensus_9908#1      ------------------------------------------------------------
consensus_9908#2      ------------------------------------------------------------
                                                                                  

consensus_9908#0      ATTCGTTGATTTCACTGACAAACCATTCAGGAGGACTATTGTACGCTTATTCATTTTATT 953
consensus_9908#1      ------------------------------------------------------------
consensus_9908#2      ------------------------------------------------------------
                                                                                  

consensus_9908#0      GTTTATAATTCTATATCTATTTTATAATCAAATACAT 990
consensus_9908#1      -------------------------------------
consensus_9908#2      -------------------------------------