cluster # 9912

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Schistosoma mansoni
cluster # 9912 cluster # 9912 Sequences # 12 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9912#0 length = 961 sequences # 6
consensus_9912#1 length = 648 sequences # 1

consensus_9912#2 length = 470 sequences # 2
consensus_9912#3 length = 373 sequences # 3

consensusID : consensus_9912#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 961
fasta sequence

                              [AGGACTTATAACCGCAAGATGTCCACATTGTCATAAAGTTACATCTGTTGGTCCAGCCTTTGCTCGTGCACACTGGATAGGTTATAGTGTACTTGCTATCATTGCTATTATCATAGCTATTAGTGTAACTGCAGGGACAGCTGAAGCTGCGATAGGAAACAATGCTCTGTACTTCCTTTGGTCAATTCTTTATCTGGTCGCTTTAGTTCTCTTGTCGCGTGCGGTAGTTTTCATGATCATGCCAGTTAGTTCAGTCGAAGTACCTACTTTACAAATCTAGTTAAATATTTATGGAAATCATAAAAATCGTTACATCTCCGAACTGTCCTTACTTTTAATTCCGTCATGTTTTTTTATTACCATATTGCTGATTTTTGATGAGTTGTCAATTTCGACAAGGTAATTGCTAATCCTTTGAAAACTGAACTGATCACCAAGATCATATTAATTTATTTTTACATTGGACTGATCACTATTCAATTAGTAATTTCAAAATTGTATCATCGATAAACATGCATATTGTTAACATTTTATTTGTGTTCTAAAAA-GACATTTGAATTGTATACATTCACGTAT-GTTGAAGTCATCATAATTCCTATTTAAAGTGAAGGTAATGTTATAACTTTTATTTTCATTATCTGAATACGGTCACCCATCTTATACAGGAAACCACTGTGAATTACACGCATGTAAATGTCTATTTCTACACTGAAATTAATGCACAACCAACCGGTTGTGTATCATGTTTTACACACTGTCGATTACTCATTTGTATAACAATCGCATCATGTTGTAGCCTCTTATATGTGTATTCTACACAGCCCCGGTCTTCGTTAAATAATCATTTATTTTCTCCTAATTATTAATTATATTTATGAAGTTCAGCTGTTTATTGATATGTACGATTTTATTTGTTACTCCA-TTTATTTTACAATCGATGACTTTATATTTTCAAAAAAAA]

[+] EMBL CD080045             [AGGACTTATAACCGCAAGATGTCCACATTGTCATAAAGTTACATCTGTTGGTCCAGCCTTTGCTCGTGCACACTGGATAGGTTATAGTGTACTTGCTATCATTGCTATTATCATAGCTATTAGTGTAACTGCAGGGACAGCTGAAGCTGCGATAGGAAACAATGCTCTGTACTTCCTTTGGTCAATTCTTTATCTGGTCGCTTTAGTTCTCTTGTCGCGTGCGGTAGTTTTCATGATCATGCCAGTTAGTTCAGTCGAAGTACCTACTTTACAAATCTAGTTAAATATTTATGGAAATCATAAAAATCGTTACATCTCCGAACTGTCCTTACTTTTAATTCCGTCATGTTTTTTTATTACCATATTGCTGATTTTTGATGAGTTGTCAATTTCGACAAGGTAATTGCTAATCCTTTGAAAACTGAACTGATCACCAAGATCATATTAATTTATTTTTACATTGGACTGATCACTATTCAATTAGTAATTTCAAAATTGTATCATCGATAAACATGCATATTGTTAACATTTTATTTGTGTTCTAAAAA GACATTTGAATTGTATACATTCACGTATGGTTGAAGTCATCATAATTCCTATTTAAAGTGAAGGTAATGTTATAACTTTTATTTTCATTATCTGAATACGGTCACCCATCTTATACAGGAAACCACTGTGAATTACACGCATG                                                                                                                                                                                                                                                                                ]
[-] EMBL CD074169             [                                                                                                                                                                                                                                                                                                                                           CTGTTAATTCCGTCATGTTTTTTTATTACCATATTGATGATTTTTGATGAGTTGTCAATTTCGACAAGGTAATTGATAATCCTTTGAAAACTGAACTGATCACCAAGATCATATTAATTTATTTTTACATTGGACTGATCCCTATTCAATTAGTAATTTCAAAATTGTATCATCGATAAACATGCATATTGTTAACATTTTATTTGTGTTATAAAAA TACATTTGAATTGTATACATTCACGTAT GTTGAAGTCATCATAATTCCTATTTAAAGTGAAGGTAATGTTATAACTTTTATTTTCATTATCTGAATACGGTCACCCATCTTATACAGGAAACCACTGTGAATTACACGCATGTAAATGTATATTTATACACTGAAATTAATGCACAACCAACCGGTTGTGTATCATGTTTTACACACTGTCGATTACTCATTTGTATAACAATCGCATCATGTTGTAGCCTCTTATATGTGTATTTTACACAGCCCCGGTCTTCGTTAAATAATCATTTATTTTCTCCTAATTATTAATTATATTTATGAAGTTCAGCTGTTTATTGATATGGACGATTTTATTTGTTACTCCAGTTTATTTTACAATCGATG                     ]
[-] EMBL CD076324             [                                                                                                                                                                                                                                                                                                                                                                                                                                 AAAACTGAACTGATCACCAAGATCATATTAATTTATTTTTACATTGGACTGATCACTATTCAATTAGTAATTTCAAAATTGTATCATCGATAAACATGCATATTGTTAACATTTTATTTGTGTTCTAAAAA GACATTTGAATTGTATACATTCACGTAT GTTGAAGTCATCATAATTCCTATTTAAAGTGAAGGTAATGTTATAACTTTTATTTTCATTATCTGAATACGGTCACCCATCTTATACAGGAAACCACTGTGAATTACACGCATGTAAATGTCTATTTCTACACTGAAATTAATGCACAACCAACCGGTTGTGTATCATGTTTTACACACTGTCGATTACTCATTTGTATAACAATCGCATCATGTTGTAGCCTCTTATATGTGTATTCTACACAGCCCCGGTCTTCGTTAAATAATCATTTATTTTCTCCTAATTATTAATTATATTTATGAAGTTCAGCTGTTTATTGATATGTACGATTTTATTTGTTACTCCA TTTATTTTACAATCGATGACTTTATATT           ]
[-] EMBL AI395073             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     cttgGATAAACATGCATATTTTAAACATTTAATTTGTGTTCTAAAAAGGACATTTGAATTGTATACATTCACGTAT GTTGAAGTCATCATAATTCCTATTTAAAGTGAAGGTAATGTTATAACTTTTATTTTCATTATCTGAATACGGTCACCCATCTTATACAGGAAACCACTGTGAATTACACGCATGTAAATGTCTATTTCTACACTGAAATTAATGCACAACCAACCGGTTGTGTATCATGTTTTACACACTGTCGATTACTCATTTGTATAACAATCGCATCATGTTGTAGCCTCTTATATGTGTATTCTACACAGCCCCGGTCTTCGTTAAATAATCATTTATTTTCTCCTAATTATTAATTATATTTATGAAGTTCAGCTGTTTATTGATATGTACGATTTTATTTGTTACTCCA TTTATTTTACAATCGATGACTTTATATTTTCAAAAAAAA]
[+] EMBL CD136279             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTATTTGTGTTCTAAAAA GACATTTGAATTGTATACATTCACGTAT GTTGAAGTCATCATAATTCCTATTTAAAGTGAAGGAAATGTTATAACTTTTATTTTCATTATCTGAATACGGTCACCCATCTTATACAGGAAACCACTGTGAATTACACGCATGTAAATGTCTATTTCTACACTGAAATTAATGCACAACCAACCGGTTGTGTATCATGTTTTACACACTGTCGATTACTCATTTGTATAACAATCGC                                                                                                                                                                                  ]
[-] EMBL CD077310             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                T GTTGAAGTCATCATAATTCCTATTTAAAGTGAAGGTAATGTTATAACTTTTATTTTCATTATCTGAATACGGTCACCCATCTTATACAGGAAACCACTGTGAATTACACGCATGTAAATGTCTATTTTTACACTGAAATTAATGCACAACCAACCGGTTGTGTATCATGTTTTACACACTGTCGATTACTCATTTGTATAACAATCGCATCATGTTGTAGCCTCTTATATGTGTATTCTACACAGCCCCGGTCTTCGTTAAATAATCATTTATTTTCTCCTAATTATTAATTATATTTATGAAGTTCTGCTGTTTATTGATATGTACGATTTTATTTGTTACTCCA TTTATTTTACAATCGATGACTTT                ]




>consensus_9912#0
AGGACTTATAACCGCAAGATGTCCACATTGTCATAAAGTTACATCTGTTGGTCCAGCCTT
TGCTCGTGCACACTGGATAGGTTATAGTGTACTTGCTATCATTGCTATTATCATAGCTAT
TAGTGTAACTGCAGGGACAGCTGAAGCTGCGATAGGAAACAATGCTCTGTACTTCCTTTG
GTCAATTCTTTATCTGGTCGCTTTAGTTCTCTTGTCGCGTGCGGTAGTTTTCATGATCAT
GCCAGTTAGTTCAGTCGAAGTACCTACTTTACAAATCTAGTTAAATATTTATGGAAATCA
TAAAAATCGTTACATCTCCGAACTGTCCTTACTTTTAATTCCGTCATGTTTTTTTATTAC
CATATTGCTGATTTTTGATGAGTTGTCAATTTCGACAAGGTAATTGCTAATCCTTTGAAA
ACTGAACTGATCACCAAGATCATATTAATTTATTTTTACATTGGACTGATCACTATTCAA
TTAGTAATTTCAAAATTGTATCATCGATAAACATGCATATTGTTAACATTTTATTTGTGT
TCTAAAAAGACATTTGAATTGTATACATTCACGTATGTTGAAGTCATCATAATTCCTATT
TAAAGTGAAGGTAATGTTATAACTTTTATTTTCATTATCTGAATACGGTCACCCATCTTA
TACAGGAAACCACTGTGAATTACACGCATGTAAATGTCTATTTCTACACTGAAATTAATG
CACAACCAACCGGTTGTGTATCATGTTTTACACACTGTCGATTACTCATTTGTATAACAA
TCGCATCATGTTGTAGCCTCTTATATGTGTATTCTACACAGCCCCGGTCTTCGTTAAATA
ATCATTTATTTTCTCCTAATTATTAATTATATTTATGAAGTTCAGCTGTTTATTGATATG
TACGATTTTATTTGTTACTCCATTTATTTTACAATCGATGACTTTATATTTTCAAAAAAA
A

consensusID : consensus_9912#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 648
fasta sequence

                              [TCGGCACGAGGGCTGAACTGCGATAGGAAACAATGCTCTGTACTTTCTTTGGTCAATTCTTTATCTGGTCGCTTGACTTCTCTTGTCGCGTGCGGTAGTTTTCATGATCATGCCATTTAGTTCAGTCGAAGTACCTACTTTACAAATCTAGTTAAATATTTATGGAAATCATAAGAATCGTTACATCTCCGAACTGTCCTTACTTTTAATTCCGTCATGTTTTTTTATTACCATATTGCTGATTTTTGATGAATTGTCAATTTCGACAAGGTAATTGCTAATCCTTTGAAAACTGAACTGATCACCAAGATCATATTAATTTATTTTTACATTGGACTGATCACTATTCAATTAGTAATGTCAAAATTGTATCATGTGATAAACATGCATATTGTTAACATTTTATTTGTGTTCTAAAAAGACATTTGAATTGTATACATTCACGTATGTTGAAGTGATCATAATTCCTATTTAAAGTGAAGGTAATGTTATAACTCTTATTTTGATTATCTGAATACGGTCACCCATCTTATACAGGAGACCACTGTGAATTACACGCATGTAAATGTGTATTTCTACACTGAAATTAATGCACAACCAACCGGATGTGTATCATGTATTACACACTGACGATTACTCATTCGAAGT]

[+] EMBL CD079974             [TCGGCACGAGGGCTGAACTGCGATAGGAAACAATGCTCTGTACTTTCTTTGGTCAATTCTTTATCTGGTCGCTTGACTTCTCTTGTCGCGTGCGGTAGTTTTCATGATCATGCCATTTAGTTCAGTCGAAGTACCTACTTTACAAATCTAGTTAAATATTTATGGAAATCATAAGAATCGTTACATCTCCGAACTGTCCTTACTTTTAATTCCGTCATGTTTTTTTATTACCATATTGCTGATTTTTGATGAATTGTCAATTTCGACAAGGTAATTGCTAATCCTTTGAAAACTGAACTGATCACCAAGATCATATTAATTTATTTTTACATTGGACTGATCACTATTCAATTAGTAATGTCAAAATTGTATCATGTGATAAACATGCATATTGTTAACATTTTATTTGTGTTCTAAAAAGACATTTGAATTGTATACATTCACGTATGTTGAAGTGATCATAATTCCTATTTAAAGTGAAGGTAATGTTATAACTCTTATTTTGATTATCTGAATACGGTCACCCATCTTATACAGGAGACCACTGTGAATTACACGCATGTAAATGTGTATTTCTACACTGAAATTAATGCACAACCAACCGGATGTGTATCATGTATTACACACTGACGATTACTCATTCGAAGT]




>consensus_9912#1
TCGGCACGAGGGCTGAACTGCGATAGGAAACAATGCTCTGTACTTTCTTTGGTCAATTCT
TTATCTGGTCGCTTGACTTCTCTTGTCGCGTGCGGTAGTTTTCATGATCATGCCATTTAG
TTCAGTCGAAGTACCTACTTTACAAATCTAGTTAAATATTTATGGAAATCATAAGAATCG
TTACATCTCCGAACTGTCCTTACTTTTAATTCCGTCATGTTTTTTTATTACCATATTGCT
GATTTTTGATGAATTGTCAATTTCGACAAGGTAATTGCTAATCCTTTGAAAACTGAACTG
ATCACCAAGATCATATTAATTTATTTTTACATTGGACTGATCACTATTCAATTAGTAATG
TCAAAATTGTATCATGTGATAAACATGCATATTGTTAACATTTTATTTGTGTTCTAAAAA
GACATTTGAATTGTATACATTCACGTATGTTGAAGTGATCATAATTCCTATTTAAAGTGA
AGGTAATGTTATAACTCTTATTTTGATTATCTGAATACGGTCACCCATCTTATACAGGAG
ACCACTGTGAATTACACGCATGTAAATGTGTATTTCTACACTGAAATTAATGCACAACCA
ACCGGATGTGTATCATGTATTACACACTGACGATTACTCATTCGAAGT

consensusID : consensus_9912#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 470
fasta sequence

                              [TAGTGTACTTGCTATCATTGCTATTATCATAGCTATTAGTGTAACTGCAGGGACAGCTGAAGCTGCGATAGGAAACAATGCTCTGTACTTCCTTTGGTCAATTAATAAGGCTCGGATGCATCAGAATACTTAGCTTATTGGTCGTTAGTCACAATTCTTTGTTCCGTTCGCAGACTAGGTGATTTCGTAATCGCTTCAAACATAGCAAAATTTGGCGATGGGGATGGGATGCAAACATGGATACTTCAATAGTGGAAATATTACTCGAGCAGCAGCTGAAACCTGTATAAATGTTGACAGATATCAAGATTTGGCCCCCCTTACAGTCTAGAACATTTAATGCAACCACAGTACCATCAGTGAACAGCATCGCAAATAACATTTCTGAATTTCCTTTTGATCCTGATGCCAACGTGTCATTTGACGTGTGGTTCGGGCGTTATGAAAGATTATCTAGATTTGATTTTGCT]

[+] EMBL CD187102             [TAGTGTACTTGCTATCATTGCTATTATCATAGCTATTAGTGTAACTGCAGGGACAGCTGAAGCTGCGATAGGAAACAATGCTCTGTACTTCCTTTGGTCAATTAATAAGGCTCGGATGCATCAGAATACTTAGCTTATTGGTCGTTAGTCACAATTCTTTGTTCCGTTCGCAGACTAGGTGATTTCGTAATCGCTTCAAACATAGCAAAATTTGGCGATGGGGATGGGATGCAAACATGGATACTTCAATAGTGGAAATATTACTCGAGCAGCAGCTGAAACCTGTATAAATGTTGACAGATATCAAGATTTGGCCCCCCTTACAGTCTAGAACATTTAATGCAACCACAGTACCATCAGTGAACAGCATCGCAAATAACATTTCTGAATTTCCTTTTGATCCTGATGCCAACGTGTCATTTGACGTGTGGTTCGGGCGTTATGAAAGATTATCTAGATTTGATTTTGCT]
[-] EMBL CD186817             [ AGTGTACTTGCTATCATTGCTATTATCATAGCTATTAGTGTAACTGCAGGGACAGCTGAAGCTGCGATAGGAAACAATGCTCTGTACTTCCTTTGGTCAATTAATAAGGCTCGGATGCATCAGAATACTTAGCTTATTGGTCGTTAGTCGCAATTCTTTGTTCCGTTCGCAGACTAGGTGATTTCGTAATCGCTTCAAACATAGCAAAATTTGGCGATGGGGATGGGATGCAAACATGGATACTTCAATAGTGGAAATATTACTCGAGCAGCAGCTGAAACCTGTATAAATGTTGACAGATAGCAAGATTTGGCCCCCCTTACAGTCTAGAACATTTAATGCAACCA                                                                                                                          ]




>consensus_9912#2
TAGTGTACTTGCTATCATTGCTATTATCATAGCTATTAGTGTAACTGCAGGGACAGCTGA
AGCTGCGATAGGAAACAATGCTCTGTACTTCCTTTGGTCAATTAATAAGGCTCGGATGCA
TCAGAATACTTAGCTTATTGGTCGTTAGTCACAATTCTTTGTTCCGTTCGCAGACTAGGT
GATTTCGTAATCGCTTCAAACATAGCAAAATTTGGCGATGGGGATGGGATGCAAACATGG
ATACTTCAATAGTGGAAATATTACTCGAGCAGCAGCTGAAACCTGTATAAATGTTGACAG
ATATCAAGATTTGGCCCCCCTTACAGTCTAGAACATTTAATGCAACCACAGTACCATCAG
TGAACAGCATCGCAAATAACATTTCTGAATTTCCTTTTGATCCTGATGCCAACGTGTCAT
TTGACGTGTGGTTCGGGCGTTATGAAAGATTATCTAGATTTGATTTTGCT

consensusID : consensus_9912#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 373
fasta sequence

                              [ACGTCCTGTGGTCAATTCTTTATCTGGTCGCTTTAGTTCTCTTGTCGCGTGCGGTAGTTTTCATGATCATGCCAGTTAGTTCAGTCGAAGTACCTACTTTACAAATCTAGTTAAATATTTATGGAAATCATAAAAATCGTTACATCTCCGAACTGTCCTTACTTTTAATTCCGTCATGTTTTTTTATTACCATATTGCTGATTTTTGATGAGTTGTCAATTTCGACAAGGTAATTGCTAATCCTTTGAAAACTGAACTGATCACCAAGATCATATTAATTTATTTTTACATTGGACTGATCACTATTCAATTAGTAATTTCAAAATTGTATCATCGATAAACATGCATATTGTTAACAAAAAAAAAAAAAAAA]

[-] EMBL AI395803             [ACGTCCTGTGGTCAATTCTTTATCTGGTCGCTTTAGTTCTCTTGTCGCGTGCGGTAGTTTTCATGATCATGCCAGTTAGTTCAGTCGAAGTACCTACTTTACAAATCTAGTTAAATATTTATGGAAATCATAAAAATCGTTACATCTCCGAACTGTCCTTACTTTTAATTCCGTCATGTTTTTTTATTACCATATTGCTGATTTTTGATGAGTTGTCAATTTCGACAAGGTAATTGCTAATCCTTTGAAAACTGAACTGATCACCAAGATCATATTAATTTATTTTTACATTGGACTGATCACTATTCAATTAGTAATTTCAAAATTGTATCATCGATAAACATGCATATTGTTAACAAAAAAAAAAAAAAAA]
[+] EMBL CD137853             [                                                                         AGTTAGTTCAGTCGAAGTACCTACTTTACAAATCTAGTTAAATATTTATGGAAATCATAAAAATCGTTACATCTCCGAACTGTCCTTACTTTTAATTCCGTCATGTTTTTTTATTACCATATTGCTGATTTTTGATGAGTTGTCAATTTCGACAAGGTAATTGCTAATCCTTTGAAAACTGAACTGATCACCAATATCATATTAATTTATTTTTACATTGGACTGATCAC                                                                      ]
[+] EMBL SMRAP104             [                                                                                              TACTTTACAAATCTAGTTAAATATTTATGGAAATCATAAAAATCGTTACATCTCCGAACTGTCCTTACTTTTAATTCCGTCATGTTTTTTTATTACCATATTGCTGATTTNTGATGAGTTGTCAATTTCGACAAGGTAATTGCTAATCCTTT                                                                                                                               ]




>consensus_9912#3
ACGTCCTGTGGTCAATTCTTTATCTGGTCGCTTTAGTTCTCTTGTCGCGTGCGGTAGTTT
TCATGATCATGCCAGTTAGTTCAGTCGAAGTACCTACTTTACAAATCTAGTTAAATATTT
ATGGAAATCATAAAAATCGTTACATCTCCGAACTGTCCTTACTTTTAATTCCGTCATGTT
TTTTTATTACCATATTGCTGATTTTTGATGAGTTGTCAATTTCGACAAGGTAATTGCTAA
TCCTTTGAAAACTGAACTGATCACCAAGATCATATTAATTTATTTTTACATTGGACTGAT
CACTATTCAATTAGTAATTTCAAAATTGTATCATCGATAAACATGCATATTGTTAACAAA
AAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9912#1      ------------------------------------------------------------
consensus_9912#3      ------------------------------------------------------------
consensus_9912#0      AGGACTTATAACCGCAAGATGTCCACATTGTCATAAAGTTACATCTGTTGGTCCAGCCTT 60
consensus_9912#2      ------------------------------------------------------------
                                                                                  

consensus_9912#1      ------------------------------------------------------------
consensus_9912#3      ------------------------------------------------------------
consensus_9912#0      TGCTCGTGCACACTGGATAGGTTATAGTGTACTTGCTATCATTGCTATTATCATAGCTAT 120
consensus_9912#2      ------------------------TAGTGTACTTGCTATCATTGCTATTATCATAGCTAT 36
                                                                                  

consensus_9912#1      --------TCGGCACGAGGGCTGAA-CTGCGATAGGAAACAATGCTCTGTACTTTCTTTG 51
consensus_9912#3      --------------------------------------------------ACGTCCTGTG 10
consensus_9912#0      TAGTGTAACTGCAGGGACAGCTGAAGCTGCGATAGGAAACAATGCTCTGTACTTCCTTTG 180
consensus_9912#2      TAGTGTAACTGCAGGGACAGCTGAAGCTGCGATAGGAAACAATGCTCTGTACTTCCTTTG 96
                                                                        ** * ** **

consensus_9912#1      GTCAATTCTTTA--TCTGGTCGCTTGACTTCTCTTGTCGCGTGCGGTAGTTTTCATGATC 109
consensus_9912#3      GTCAATTCTTTA--TCTGGTCGCTTTAGTTCTCTTGTCGCGTGCGGTAGTTTTCATGATC 68
consensus_9912#0      GTCAATTCTTTA--TCTGGTCGCTTTAGTTCTCTTGTCGCGTGCGGTAGTTTTCATGATC 238
consensus_9912#2      GTCAATTAATAAGGCTCGGATGCATCAGAATACTTAGCTTATTGGTCGTTAGTCACAATT 156
                      *******  * *     **  ** * *     ***  *   *  *    *  ***  ** 

consensus_9912#1      ATGCCATTTAGTTCAGTCGAAGTACCTACTTTACAAATCTAGTTAAATATTTATGGAAAT 169
consensus_9912#3      ATGCCAGTTAGTTCAGTCGAAGTACCTACTTTACAAATCTAGTTAAATATTTATGGAAAT 128
consensus_9912#0      ATGCCAGTTAGTTCAGTCGAAGTACCTACTTTACAAATCTAGTTAAATATTTATGGAAAT 298
consensus_9912#2      CT-TTGTTCCGTTCG--CAGACTAGGTGATTTCGTAATCGCTTCAAACATA---GCAAAA 210
                       *     *  ****   *  * **  *  ***   ****   * *** **    * *** 

consensus_9912#1      CATAAGAATCGTTACATCTCCGAACTGTCCTTACTTTTAATTCCGTCATGTTTTTTTATT 229
consensus_9912#3      CATAAAAATCGTTACATCTCCGAACTGTCCTTACTTTTAATTCCGTCATGTTTTTTTATT 188
consensus_9912#0      CATAAAAATCGTTACATCTCCGAACTGTCCTTACTTTTAATTCCGTCATGTTTTTTTATT 358
consensus_9912#2      TTTGGCGATGGGGATGGGATGCAAACATGGATACTTCAATAGTGGAAATATTACTCGAGC 270
                        *    ** *  *        **   *   *****  *     *  ** **  *  *  

consensus_9912#1      ACCATATTGCTGATTTTTGATGAATTGTCAATTTCGACAAGGTAATTGCTAATCCTTTGA 289
consensus_9912#3      ACCATATTGCTGATTTTTGATGAGTTGTCAATTTCGACAAGGTAATTGCTAATCCTTTGA 248
consensus_9912#0      ACCATATTGCTGATTTTTGATGAGTTGTCAATTTCGACAAGGTAATTGCTAATCCTTTGA 418
consensus_9912#2      AGCA----GCTGAAACCTGTATAAATGTTGACA--GATATCAAGATTTGGCCCCCCTTAC 324
                      * **    *****    **   *  ***  *    ** *     ***      ** **  

consensus_9912#1      AAACTGAACTGATCACCAAGATCATATTA--ATTTATTTTTA-CATTGGACTGATCACTA 346
consensus_9912#3      AAACTGAACTGATCACCAAGATCATATTA--ATTTATTTTTA-CATTGGACTGATCACTA 305
consensus_9912#0      AAACTGAACTGATCACCAAGATCATATTA--ATTTATTTTTA-CATTGGACTGATCACTA 475
consensus_9912#2      AGTCTAGAACATTTAATGCAACCACAGTACCATCAGTGAACAGCATCGCAAATAACATTT 384
                      *  **  *    * *     * ** * **  **   *    * *** * *   * ** * 

consensus_9912#1      TTCAATTAGTAATGTCAAAATTG-TATCATGTGATAAACATGCATATTGTTAACATTTTA 405
consensus_9912#3      TTCAATTAGTAATTTCAAAATTG-TATCAT-CGATAAACATGCATATTGTTAACAAAAAA 363
consensus_9912#0      TTCAATTAGTAATTTCAAAATTG-TATCAT-CGATAAACATGCATATTGTTAACATTTTA 533
consensus_9912#2      CTGAATT--TCCTTTTGATCCTGATGCCAACGTGTCATTTGACGTGTGGTTCGGGCGTTA 442
                       * ****  *  * *  *   ** *  **     * *     * * * ***        *

consensus_9912#1      TTTGTGTTCTAAAAAGACATTTGAATTGTATACATTCACGTATGTTGAAGTGATCATAAT 465
consensus_9912#3      A---------AAAAAAAAA----------------------------------------- 373
consensus_9912#0      TTTGTGTTCTAAAAAGACATTTGAATTGTATACATTCACGTATGTTGAAGTCATCATAAT 593
consensus_9912#2      T---------GAAAGATTATCTAGATTTGATTTTGCT----------------------- 470
                                 ***    *                                         

consensus_9912#1      TCCTATTTAAAGTGAAGGTAATGTTATAACTCTTATTTTGATTATCTGAATACGGTCACC 525
consensus_9912#3      ------------------------------------------------------------
consensus_9912#0      TCCTATTTAAAGTGAAGGTAATGTTATAACTTTTATTTTCATTATCTGAATACGGTCACC 653
consensus_9912#2      ------------------------------------------------------------
                                                                                  

consensus_9912#1      CATCTTATACAGGAGACCACTGTGAATTACACGCATGTAAATGTGTATTTCTACACTGAA 585
consensus_9912#3      ------------------------------------------------------------
consensus_9912#0      CATCTTATACAGGAAACCACTGTGAATTACACGCATGTAAATGTCTATTTCTACACTGAA 713
consensus_9912#2      ------------------------------------------------------------
                                                                                  

consensus_9912#1      ATTAATGCACAACCAACCGGATGTGTATCATGTATTACACACTGACGATTACTCATTCGA 645
consensus_9912#3      ------------------------------------------------------------
consensus_9912#0      ATTAATGCACAACCAACCGGTTGTGTATCATGTTTTACACACTGTCGATTACTCATTTGT 773
consensus_9912#2      ------------------------------------------------------------
                                                                                  

consensus_9912#1      AGT--------------------------------------------------------- 648
consensus_9912#3      ------------------------------------------------------------
consensus_9912#0      ATAACAATCGCATCATGTTGTAGCCTCTTATATGTGTATTCTACACAGCCCCGGTCTTCG 833
consensus_9912#2      ------------------------------------------------------------
                                                                                  

consensus_9912#1      ------------------------------------------------------------
consensus_9912#3      ------------------------------------------------------------
consensus_9912#0      TTAAATAATCATTTATTTTCTCCTAATTATTAATTATATTTATGAAGTTCAGCTGTTTAT 893
consensus_9912#2      ------------------------------------------------------------
                                                                                  

consensus_9912#1      ------------------------------------------------------------
consensus_9912#3      ------------------------------------------------------------
consensus_9912#0      TGATATGTACGATTTTATTTGTTACTCCATTTATTTTACAATCGATGACTTTATATTTTC 953
consensus_9912#2      ------------------------------------------------------------
                                                                                  

consensus_9912#1      --------
consensus_9912#3      --------
consensus_9912#0      AAAAAAAA 961
consensus_9912#2      --------