These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9939#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 981 fasta sequence [TTGGGGCCTTATGGGGACGCGGGACAAAAGTCCCACCGAGAGTAGTTGCCTGGTTGGGAAGGTTTTGATCGAAGATTTGCCAAAACGAGCTATTTCTCATAATGACA-TACGTGATTGGTTGAAAAAGTATGGGTGCATTTCAGAAATCGTAATATATCCGCGCTGCTTGCTTGTTCAGTTCGACTCTGATATCGAGGCCGCTGGTGCTGTTCATTGCGAAAATGGGGCATCACTATTTGGCACTAAAGTCTCTCTAAAGCATGTGGAAGCCAGTGATTTGAAAGCGCTGCGTCGTGCAGGCCCACCCATTGATCGGTTTTCCACAAACTTGCAACGGCATTCCGGACGCGTTTCTAGTCGT-GATCGTGATCGGGAGAAAAGTCGCGGATCCTTGCACCGTGACCACTTCCGAGGCCGAACCAAGTCTCCGGACAACAAACGTTCACGTGACATCTCACCGCGTCGACACTCAAGGTCACCAGTCATAACGCGTACTGATCGGCGTACAGTTCATCCGCTAAACTGGTTATCAGAAGTTGCTGAACGAGACAAAAAGCTGAATGGATCCAGTCTTCT-TGGTCCTG-CCAATAAATCAACTGAAGAGCCTATCGTCAAATCACCACCTTATAT-GGTGGCAATAATAACCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGTTACTAAAACTCTAACTACACCAGGAAGTCCTTCTGTTACTCATATAGTAGTTCTACTGTCTGTAGATCATCTTAGCCCGTGCCTAGCTGATCTTACCAAAGATGGCGTTCCGTTCGCGATCATTTGCACTATGACTAATTGGGCACATAACTCGTGCACATTACGTATTCTTTACGCTCCGACCCAACAAGAGCATCGTAATATGCCTTTGGATGATGCATTAATCCTACTTCATCGAGAATACACAGCATATACGACAAGCAGTAAAGAAGAGGTTAATACTGCTCC] [+] EMBL CD200836 [TTGGGGCCTTATGGGGACGCGGGACAAAAGTCCCACCGAGAGTAGTTGCCTGGTTGGGAAGGTTTTGATCGAAGATTTGCCAAAACGAGCTATTTCTCATAATGACAGTACGTGATTGGTTGAAAAAGTATGGGTGCATTTCAGAAATCGTAATATATCCGCGCTGCTTGCTTGTTCAGTTCGACTCTGATATCGAGGCCGCTGGTGCTGTTCATTGCGAAAATGGGGCATCACTATTTGGCACTAAAGTCTCTCTAAAGCATGTGGAAGCCAGTGATTTGAAAGCGCTGCGTCGTGCAGGCCCACCCATTGATCGGTTTTCCACAAACTTGCAACGGCATTCCGGACGCGTTTCTAGTCGT GATCGTGATCGGGAGAAAAGTCGCGGATCCTTGCATCGTGACCACTT ] [+] EMBL AI975463 [ GGGACAAAAGTCCCACCGAGAGTAGTTGCCTGGTTGGGAAGGTTTTGATCGAAGATTTGCCAAAACGAGCTATTTCTCATAATGACA TACGTGATTGGTTGAAAAAGTATGGGTGCATTTCAGAAATCGTAATATATCCGCGCTGCTTGCTTGTTCAGTTCGACTCTGATATCGAGGCCGCTGGTGCTGTTCATTGCGAAAATGGGGCATCACTATTTGGCACTAAAGTCTCTCTAAAGCATGTGGAAGCCAGTGATTTGAAAGCGCTGCGTCGTGCAGGCCCACCCATCGATCGGTTTTCCACAAACTTGCAACGGCATTCCGGACGCGTTTCTAGTCGT GATCGTGATCGGGAGAAAAGTCGCGGATCCTTGCACCGTGACCACTTTCGAGGCCGAACCAAGTCTCCGGACAACAAACGTTCACGTGACATCTCACCGCGTCGACACTCAAGGTCACCAGTCATAACGCGTACTGATCGGCGTACAGTTCATCCGCTAAACTGGTTATCAGAAGTTGCTGAACGAGACAAAAAGCTGAATGGATCCAGTCTTCT TGGTCCTG CCAATAAATCAACTGAAGAGCCTATCGTCAAATCACCACCTTATAT GGTGGCA ] [+] EMBL CD200967 [ ATCGAAGATTTGCCAAAACGAGCTATTTCTCATAATGACA TACGTGATTGGTTGAAAAAGTGTGGGTGCATTTCAGAAATCGTAATATATCCGCGCTGCTTGCTTGTTCAGTTCGACTCTGATATCGAGGCCGCTGGTGCTGTTCATTGCGAAAATGGGGCATCACTATTTGGCACTAAAGTCTCTCTAAAGCATGTGGAAGCCAGTGATTTGAAAGCGCTGCGTCGTGCAGGCCCACCCATTGATCGGTTTTCCACAAACTTGCAACGGCATTCCGGACGCGTTTCTAGTCGT GATCGTGATCGGGAGAAAAGTCGCGGATCCTTGCACCGTGACCACTTCCGAGGCCGAACCAAGTCTCCGGACAACAAACGTTCACGTGACATCTCACCGCGTCGACACTCAAGGT ] [-] EMBL CD200615 [ AAGCCAGTGATTTGAAAGCGCTGCGTCGTGCAGGCCCACCCATTGATCGGTTTTCCACAAACTTGCAACGGCATTCCGGACGCGTTTCTAGTCGT GATCGTGATCGGGAGAAAAGTCGCGGATCCTTGCACCGTGACCACTTCCGAGGCCGAACCAAGTCTCCGGACAACAAACGTTCACGTGACATCTCACCGCGTCGACACTCAAGGTCACCAGTCATAACGCGTACTGATCGGCGTACAGTTCATCCGCTAAACTGGTTATCAGAAGTTGCTGAACGAGACAAAAAGCTGGATGGATCCAGTCTTGC TGGTCCTG CCAATAAAT ] [-] EMBL CD178997 [ CGTCGTGCAGGCCCACCCATTGATCGGTTTTCCACAAACTTGCGACGGCATTCCGGACGCGTTTCTAGTCGT GATCGTGATCGGGAGAAAAGTCGCGGATCCTTGCACCGTGACCACTTCCGAGGCCGAACCAAGTCTCCGGACAACAAACGTTCACGTGACATCTCACCGCGTCGACACTCAAGGTCACCAGTCATAACGCGTACTGATCGGCGTACAGTTCATCCGCTAAACTGGTTATCAGAAGTTGCTGAACGAGACAAAAAGCTGAATGGATCCAGTCTTCT TGGTCCTG CCAATAAATCAACTGAAGAGCCTATCGTCAAATCACCACCTTATAT GGTGGCAATAATAACCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGTTACTAAAACTCTAACTACA ] [+] EMBL CD061338 [ CCATTGATCGGTTATCCACAAACTTGCAACGGCATTCCGGACGCGTATCTAGTCGTAGATCGTGATCGGGAGAAAAGTCGCGGATCCTTGCACCGTGACCACTTCCGAGGCCGAACCAAGTCTCCGGACAACAAACGTTCACGTGACATCTCACCGCGTCGACACTCAAGGTCACCAGTCATAACGCGTACTGATCGGCGTACAGTTCATCCGCTAAACTGGTTTTCAGAAGTTGCTGAACGAGACAAAAAGCTGAATGGATCCAGTCTTCTATGGTCCTG CCAATAAATCAACTGAAGAGCCTATCGTCGAATCACCACCTTATAT GGTGGCAATAATAACCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGTTACTAAAACTCTAACTACACCAGGAAGTCCTTCTGTTACTCATATAGTAGTTCTACTGTCTGTAGATCATCTTAGCCCGTGCCTAGCTGATCTTACCAAAGATGGCGTACCGTT ] [+] EMBL CD194013 [ CTGAATGGATCCAGTCTTCT TGGTCCTG CCAATAAATCAACTGAAGAGCCTATCGTCAAATCACCACCTTATAT GGTGGCAATAATAACCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGTTACTAAAACTCTAACTACACCAGGAAGTCCTTCTGTTACTCATATAGTAGTTCTACTGTCTGTAGATCATCTTAGCCCGTGCCTAGCTGATCTTACCAAAGATGGCGTTCCGTTCGCGATCATTTGCACTATGACTAATTGGGCACATAACTC ] [+] EMBL CD181607 [ GTCTTCT TGGTCCTG CCAATAAATCAACTGAAGAGCCTATCGTCAAATCACCACCTTATAT GGTGGCAATAATAACCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGTTACTAAAACTCTAACTACACCAGGAAGTCCTTCTGTTACTCATATAGTAGTTCTACTGTCTGTAGATCATCTTAGCCCGTGCCTAGCTGATCTTACCAAAGATGGCGTTCCGTTCGCGATCATTTGCACTATGACTAATTGGGCACATAACTCGTGCACATTACGTATTCTTTACGCTCCGACCCAACAAGAGCATCGTAATATGCCTTTGGATGATGCATTAATCCTACTTCA ] [-] EMBL CD181467 [ TCTTC TNGT CTGNCCAATAAATCANCTGAAGAGCCTATCGTCAAATCACCACC TATATGGGTGGCAATAATANCCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGTTACTAAAACTCTAACTACACCAGGAAGTCCTTCTGTTACTCATATAGTAGTTCTACTGTCTGTAGATCATCTTAGCCCGTGCCTAGCTGATCTTACCAAAGATGGCGTTCCGTTCGCGATCATTTGCACTATGACTAATTGGGCACATAACTCGTGCACATTACGTATTCTTTACGCTCCGACCCAACAAGAGCATCGTAATATGCCTTTGGATGATGCATTAATCCTACTTCAT ] [-] EMBL CD120556 [ CCTG GCAATAAATCAACTGAAGAGCCTATCGTCAAATCACCACCTTATAT GGTGGCAATAATAACCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGTTACTAAAACTCTAACTACACCAGGAAGTCCTTCTGTTACTCATATAGTAGTTCTACTGTCTGTAGATCATCTTAGCCCGTGCCTAGCTGATCTTACCAAAGATGGCGTTCCGTTCGCGATCATTTGCACTATGACTAATTGGGCACATAACTCGTGCACATTACGTATTCTTTACGCTCCGACCCAACAAGAGCATCGTAATATGCCTTTGGATGATGCATTAATCCTACTTCATCGAGAATACACAGCATATACGACAAGCAGTAAAGAAGAGGTTAATACTGCTCC] [+] EMBL CD194056 [ TCAACTGAAGAGCCTATCGTCAAATCACCACCTTATAT GGTGGCAATAATAACCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGTTACTAAAACTCTAACTACACCAGGAAGTCCTTCTGTTACTCATATAGTAGTTCTACTGTCTGTAGATCATCTTAGCCCGTGCCTAGCTGATCTTACCAAAGATGGCGTTCCGTTCGCGATCATTTGCACTATGACTAATTGGGCACATAACTC ] [+] EMBL CD188559 [ CAACTGCAGAGCCTATCGTCAAATCACCACCTTATAT GGTGGCAGTAATAACCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGCGACTAAAACTCTAACTACACCAGGAAGTCCTTCTGTTACTCATATAGTAGTTCTACTGTCTGTAGATCATCTTAGCCCGTGCCTAGCTGATCTTACCAAAGATGGCGTACCGTTCGCGATCATTTGCACTATGACTAATTGGGCACATAACTCGTGCACATTACGTATTCTTT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||