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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9942#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 645 fasta sequence
[CGCGGACAATTGCGTTTAGGCTGTTTGCCTAAGTAGTCCTAGTAAGATAATGTTGGTGTCTGTCTATTCACAATACTTTTCATAAAAATGATTAAAAAGTCACTATTCATGCACAAGAAGACCCTCATCTTTCTCCTGCTGGCTTGTGTTACATTATATATATTATTTTGGGACCGCCTGGGTTTATCCCCTAATATTTACGACCGTCCGTTACCGGATTACATACTTGCAGACGATCGTGCTTCTCGTA-TTTATCACCACCGTCTTCAACTGTATCGACCGGAGAACAGTTCAAGCACCACCAACACGTTTGTATATATCCCAACAGAATTTAACGAGAATGAAGCCTACATATCGGACTTATTACG-TCGTAATGGCT-ATGTTGCTGCAATC-CTC-TCTGAAGAG-TTTGC-TGA-TGAAGCA-TTG-TTTCCGAA-TCCCAC-CTTTTCCTGTAC-ATGTGGCCGTGTAAGTGATCCTTGCATCTGTTGTGGTATTTTACAGCCCCAAG-TTTCTGGCCAGAA-TCA-TCTTTCTCCAGATTTATACCAACCTATTTTGTTGACACCTGACAATACTAAGCCAGCTCACTTCTGCATAAATACCACTTATCTTCCCAACAAAAAGCAAATAAAGATTTCTGCAGTCCTTGTAAAA]
[-] EMBL CD127634 [CGCGGACAATTGCGTTTAGGCTGTTTGCCTAAGTAGTCCTAGTAAGATAATGTTGGTGTCTGTCTATTCACAATACTTTTCATAAAAATGATTAAAAAGTCACTATTCATGCACAAGAAGACCCTCATCTTTCTCCTGCTGGCTTGTGTTACATTATATATATTATTTTGGGACCGCCTGGGTTTATCCCCTAATATTTACGACCGTCCGTTACCGGATTACATACTTGCAGACGATCGTGCTTCTCGTAGTTTATCACCACCGTCTTCAACTGT TAGACCGGAGAACAGTTCAAGC ]
[+] EMBL CD128130 [ AATTGCGTTTAGGCTGTTTGCCTAAGTAGTCCTAGTAAGATAATGTTGGTGTCTGTCTATTCACAATACTTTTCATAAAAATGATTAAAAAGTCACTATTCATGCACAAGAAGACCCTCATCTTTCTCCTGCTGGCTTGTGTTACATTATATATATTATTTTGGGACCGCCTGGGTTTATCCCCTAATATTTACGACCGTCCGTTACCGGATTACATACTTGCAGACGATCGTGCTTCTCGTA TTTATCACCACCGTCTTCAACTGTATCGACCGGAGAACAGTTCAAGCACCACCAACACGTTTGTATATATCCCAACAGAATTTAACGAGAATGAAGCCTACATATCGGACTTATTACG TCGTAATGGCT ATGTTGCTGCAATC CTC TCTGAAGAG TTTGC TGA TGAAGCA TTG TTTCCGAA TCCCAC CTTTTCCTGTAC ATGTGGGCGTGTAAGTGATCCTTGCATCTGGTGTGGTATTTTACAGCCCCAAG TTTCTGGCCCGAA TCA TCTTTCT ]
[+] EMBL AI067632 [ CTCATCTTTCTCCTGCTGGCTTGTGTTACATTATATATATTATTTTGGGACCGCCTGGGTTTATCCCCTAATATTTACGACCGTCCGTTACCGGATTACATACTTGCAGACGATCGTGCTTCTCGTA TTTATCACCACCGTCTTCAACTGTATCGACCGGAGAACAGTTCAAGCACCACCAACACGTTTGTATATATCCCAACAGAATTTAACGAGAATGAAGCCTACATATCGGACTTATTACG TCGTAATGGCT ATGTTGCTGCAATC CTC TCTGAAGAG TTTGC TGA TGAAGCA TTG TTTCCGAA TCCCAC CTTTTCCTGTAC ATGTGGCCGTGTAAGTGATCCTTGCATCTGTTGTGGTATTTTACAGCCCCAAG TTTCTGGCCAGAA TCA TCTTTCTCCAGATTTATACCAACCTATTTTGTTGACACCTGACAATACTAAGCCAGCTCA ]
[+] EMBL AI067814 [ TCATCTTTCTCCTGCTGGCTTGTGTTACATTATATATATTATTTTGGGACCGCCTGGGTTTATCCCCTAATATTTACGACCGTCCGTTACCGGATTACATACTTGCAGACGATCGTGCTTCTCGTA TTTATCACCACCGTCTTCAACTGTATCGACCGGAGAACAGTTCAAGCACCACCAACACGTTTGTATATATCCCAACAGAATTTAACGAGAATGAAGCCTACATATCGGACTTATTACG TCGTAATGGCT ATGTTGCTGCAATC CTC TCTGAAGAT TTTGC TGA TCAAGCA TTG TTTCCGAA TCCCAC CTTTTCCTGTAC ATGTGGCCGTGTAAGTGATCCTTGCATCTGTTGTGGTATTTTACAGCCCCAAG TTTCTGGCCAG ]
[+] EMBL AI068034 [ TTCTCCTGCTGGCTTGTGTTACATTATATATATTATTTTGGGACCGCCTGGGTTTATCCCCTAATATTTACGACCGTCCGTTACCGGATTACATACTTGCAGACGATCGTGCTTCTCGTA TTTATCACCACCGTCTTCAACTGTATCGACCGGAGAACAGTTCAAGCACCACCAACACGTTTGTATATATCCCAACAGAATTTAACGAGAATGAAGCCTACATATCGGACTTATTACG TCGTAATGGCT ATGTTGCTGCAATC CTC TCTGAAGAG TTTGC TGA TGAAGCA TTG TTTCCGAA TCCCAC CTTTTCCTGTAC ATGTGGCCGTGTAAGTGATCCTTGCATCTGTTGTGGTATTTTACAGCCCCAAG TTTCTGGCCAG ]
[+] EMBL AI067817 [ TTCTCCTGCTGGCTTGTGTTACATTATATATATTATTTTGGGACCGCCTGGGTTTATCCCCTAATATTTACGACCGTCCGTTACCGGATTACATACTTGCAGACGATCGTGCTTCTCGTA TTTATCACCACCGTCTTCAACTGTATCGACCGGAGAACAGTTCAAGCACCACCAACACGTTTGTATATATCCCAACAGAATTTAACGAGAATGAAGCCTACATATCGGACTTATTACG TCGTAATGGCT ATGTTGCTGCAATC CTC TCTGAAGAG TTTGC TGA TGAAGCA TTG TTTCCGAA TCCCAC CTTTTCCTGTAC ATGTGGCCGTGTAAGTGATCCTTGCATCTGTTGTGGTATTTTACAGCCCCAAG TTTCTGGCCAGAA TCA TCTTTCTCCAGATTTATACCAACCTATTTTGTTGACAC ]
[+] EMBL CD150128 [ TAATATTTACGACCGTCCGTTACCGGATTACATACTTGCAGACGATCGTGCTTCTCGTA TTTATCACCACCGTCTTCAACTGTATCGACCGGAGAACAGTTCAAGCACCACCAACACGTTTGTATATATCCCAACAGAATTTAACGAGAATGAAGCCTACATATCGGACTTATTACG TCGTAATGGCT ATGTTGCTGCAATC TTC TCTGAAGAG TTTGC TGA TGAAGCA TTG TTTCCG ]
[-] EMBL CD200932 [ AATATTTACGACCGTCCGTTACCGGATTACATACTTGCAGACGATCGTGCTTCTCGTA TTTATCACCACCGTCTTCAACTGTATCGACCGGAGAACAGTTCAAGCACCACCAACACGTTTGTATATATCCCAACAGAATTTAACGAGAATGAAGCCTACATATCGGACTTATTACG TCGTAATGGCT ATGTTGCTGCAATC CTC TCTGAAGAG TTTGC TGA TGAAGCA TTG TTTCCGAA TCCCAC CTTTTCCTGTAC ATGTGGCCGCGTAAGTGATCCTTGCATCTGTTGTGGTA ]
[-] EMBL CD170676 [ AATATTTACGACCGTCCGTTACCGGATTACATACTTGCAGACGATCGTGCTTCTCGTA TTTATCACCACCGTCTTCAACTGTATCGACCGGAGAACAGTTCAAGCACCACCAACACGTTTGTATATATCCCAACAGAATTTAACGAGAATGAAGCCTACATATCGGACTTATTACG TCGTAATGGCT ATGTTGCTGCAATC CTC TCTGAAGAG TTTGC TGA TGAAGCA TTG TTTCCGAA TCCCAC CTTTTCCTGTAC ATGTGGCCGTGTAAGTGATCCTTGCATCTGTTGTGGTATTTTACAGCCCCAAG TTTCTGGCCAGAA TCA TCTTTCTCCAGATTTATACCAACCTATTTTGTTGACACC ]
[-] EMBL CD177711 [ AAGCCTACATATCGGACTTATTACGTTCGTAATGGCTAATGTTGCTGCAATCACTCATCTGAAGAGTTTTGCTTGATTGAAGCATTTGTTTTCCGAATTCCCACAATTTTCCTGTACAATGTGGCCGTGTAAGTGATCCTTGCATCTGTTGTGGTATTTTACAGCCCCAAGTTTTCTGGCCAGAATTCATTCTTTCTCCAGATTTTTACCAACCTATTTTGTTGACACCTGACAATACTAAGCCAGCTCACTTCTGCATAAATACCACTTTTCTTCCCAACAAAAAGCAAATAAAGATTTCTGCAGTCCTTGTAAAA]
[+] EMBL CD184512 [ ATTACG TCGTAATGGCT ATGTTGCTGCAATC CTC TCTGAAGAG TTTGC TGA TGAAGCA TTG TTTCCGAA TCCCAC CTTTTCCTGTAC ATGTGGCCGTGTAAGTGATCCTTGCATCTGTTGTGGTATTTTACAGCCCCAAG TTTCTGGCCAGAA TCA TCTTTCTCCAGGTTTATACCAACCTATTTTGTTGACACCTGACAATACTAAGCCAGCTCACTTCTGCATAAATACCACTTATCTTCCCAACAAAAAGCAAATAAAGATTTCTGCAGTCCTTGTAA ]
[-] EMBL CD177734 [ TGAAGCA TTG TTTCCGAA TCCCAC CTTTTCCTGTAC ATGTGGCCGTGTAAGTGATCCTTGCATCTGTTGTGGTATTTTACAGCCCCAAG TTTCTGGCCAGAA TCA TCTTTCTCCAGATTTATACCAACCTATTTTGTTGACACCTGACAATACTAAGCCAGCTCACTTCTGCATAAATACCACTTATCTTCCCAACAAAAAGCAAATAAAGATTTCTGCAGTCCTTGTAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||