cluster # 9954

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Schistosoma mansoni
cluster # 9954 cluster # 9954 Sequences # 12 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9954#0 length = 988 sequences # 6
consensus_9954#1 length = 760 sequences # 4

consensus_9954#2 length = 577 sequences # 1
consensus_9954#3 length = 273 sequences # 1

consensusID : consensus_9954#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 988
fasta sequence

                              [ACATACTCATAGCCAATCTATTTGTTTGAACGATGCCTCCAAAAAGAAATGTAAGAAATAAGGATAGTGAAGACGAAAGTGTTAGAGCTAATGCTAACAACAACGAGGGAAAAAACGCAAAGTCAGGAAATAAAAAAAATAGGGATGACGAAGATGAAAGTGTTAGAGCTGATACTAACAACAATGAGAAAAAAAACACAAAGTCAGGGAATAAAAAAAACAAGGGGAAAGCTGTTAGTCACGTTCCTTCGGATTCTGAAGAGGATAAAGTAATTACAGACGACTCTAATGCAAAAAGAAAAGAGAAAAAAAAGAAAGGGAAAGAACTGTCAGTTAATGATTTAGTTGAAAAACAAAATGACACAAAAATAACAAAGGAAAGTCATAAGTCCAGTAACGAATCTCTCAAATCAGATGAAGTTGATGACGAATTTTACAAAAAGAAAAGAAAGGCGGGACGTAATACTGTTAAACGTGCAGATTCTGAAGACGAAAGGGATGCAAATAAGGCATCAAATAAAAAACAGGGGAAAAAGAAAGGTAAATTAAATGCGATTGATGCAGAACAAAGGGGTCAAAAAGCTGATATCCAACAAAAAACAGAAGTTTGTGATTCCAAAATGGATTCCAATCGTGAAACTCAACAAAAGAATTATGAACTTGATGAGGAATCTACAAAACCTGAAGAAATTGATGACGATTTTTATACAAAGAAAAGAAAAGCCGGTCGTGGAAAACAAAAGCAAGGACCAGAACATGGAGAACTACCTAATCAAAATGCAACTGGTAAGAAAAAGAAACAGAAACCCGGAAAAAAGAAACATGATGATGGATTCGATAGTGAACAAGAAGACCTTGATGGTTTGGCCAAAGCCATGACAGTTGTTTCTTTAGATAGTGAAATAGATGATCTCGATCTTCAAAGTACGAAGTTTGATGGGTTTTCAGCAATCTGTCTTGATCATCATACTACAGTAAATAATCAGGA]

[+] EMBL CD153814             [ACATACTCATAGCCAATCTATTTGTTTGAACGATGCCTCCAAAAAGAAATGTAAGAAATAAGGATAGTGAAGACGAAAGTGTTAGAGCTAATGCTAACAACAACGAGGGAAAAAACGCAAAGTCAGGAAATAAAAAAAATAGGGATGACGAAGATGAAAGTGTTAGAGCTGATACTAACAACAATGAGAAAAAAAACACAAAGTCAGGGAATAAAAAAAACAAGGGGAAAGCTGTTAGTCACGTTCCTTCGGATTCTGAAGAGGATAAAGTAATTACAGACGACTCTAATGCAAAAAGAAAAGAGAAAAAAAAGAAAGGGAAAGAACTGTCAGTTAATGATTTAGTTGAAAAACAAAATGACACAAAAATAACAAAGGAAAGTCATAAGTCCAGTAACGAATCTCTCANATCAGATGAAGTTGATGACGAATTTTACAAAAAGAAAAGAAAGGCGGGACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD184139             [                                                                                                                                                                                                                                   AAAGCTGTTAGTCACGTTCCTTCGGATTCTGAAGAGGATAAAGTAATTACAGACGACTCTAATGCAAAAAGAAAAGAGAAAAAAAAGAAAGGGAAAGAACTGTCAGTTAATGATTTAGTTGAAAAACAAAATGACACAAAAATAACAAAGGAAAGTCATAAGTCCAGTAACGAATCTCTCAAATCAGATGAAGTTGATGACGAATTTTACAAAAAGAAAAGAAAGGCGGGACGTAATACTGTTAAACGTGCAGATTCTGAAGACGAAAGGGATGCAAATAAGGCATCAAATAAAAAACAGGGGAAAAAGAAAGGTAAATTAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD117971             [                                                                                                                                                                                                                                                                                                                                     ACTGTCAGTTAATGATTTAGTTGAAAAACAAAATGACACAAAAATAACAAAGGAAAGTCATAAGTCCAGTAACGAATCTCTCAAATCAGATGAAGTTGATGACGAATTTTACAAAAAGAAAAGAAAGGCGGGACGTAATACTGTTAAACGTGCAGATTCTGAAGACGAAAGGGATGCAAATAAGGCATCAAATAAAAAACAGGGGAAAAAGAAAGGTAAATTAAATGCGATTGATGCAGAACAAAGGGGTCAAAAAGCTGATATCCAACAAAAAACAGAAGTTTGTGATTCCAAAACGGATTCCAATCGTGAAACTCAACAAAAGAATTATGAACTTGATGAGGAATCTACAAAACCTGAAGAAATTGATGACGATTTTTATACAAAGAAAAGAAAAGCCGGTCGTGGAAAACAAAAGCAAGGACCAGAACATGGAGAACTACCTAATCAAAATGCAACTGGTAAGAAAAAGAAACAGAAACCCGGAAAAAAGAAACATGATGATGGATTCGATAGTGAACAAGAA                                                                                                                                         ]
[+] EMBL CD192438             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACAGAAGTTTGTGATTCCAAAATGGATTCCAATCGTGAAACTCAACAAAAGAATTATGAACTTGATGAGGAATCTACAAAACCTGAAGAAATTGATGACGATTTTTATACAAAGAAAAGAAAAGCCGGTCGTGGAAAACAAAAGCAAGGATCAGAACATGGAGAACTACCTAATCAAAATGCAACTGGTAAGAAAAAGAAACAGAAACCCGGAAAAAAGAAACATGATGATGGATTCGATAGTGAACAAGAAGACCTTGATGGTTTGGCCAAAGCCATGACAGTTGTTTCTTTAGATAGTGAAGTAGATGATCTCGATCTTCAAAGTACGAAGTTTGATGGGTTTTCAGCAATCTGTCTTGATCATCATACTACAGTAAATAATCAGGA]
[+] EMBL CD192507             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACAGAAGTTTGTGATTCCAAAATGGATTCCAATCGTGAAACTCAACAAAAGAATTATGAACTTGATGAGGAATCTAGAAAACCTGAAGAAATTGATGACGATTTTTATACAAAGAAAAGAAAAGCCGGTCGTGGAAAACAAAAGCAAGGACCAGAACATGGAGAACTACCTAATCAAAATGCAACTGGTAAGAAAAAGAAACAGAAACCCGGAAAAAGGAAACATGATGATGGATTCGATAGTGAACAAGAAGACCTTGATGGTTTGGCCAAAGCCATGACAGTTGTTTCTTTAGATAGTGAAATAGATGATCTCGATCTTCAAAGTACGAAGTTTGATGGGTTTTCAGCAATCTGTCTTGATCATCATACTACAGTAAATAATCAGGA]
[+] EMBL CD192548             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACAGAAGTTTGTGATTCCAAAATGGATTCCAATCGTGAAACTCAACAAAAGAATTATGAACTTGATGAGGAATCTAGAAAACCTGAAGAAATTGATGACGATTTTTATACAAAGAAAAGAAAAGCCGGTCGTGGAAAACAAAAGCAAGGACCAGAACATGGAGAACTACCTAATCAAAATGCAACTGGTAAGAAAAAGAAACAGAAACCCGGAAAAAGGAAACATGATGATGGATTCGATAGTGAACAAGAAGACCTTGATGGTTTGGCCAAAGCCATGACAGTTGTTTCTTTAGATAGTGAAATAGATGATCTCGATCTTCAAAGTACGAAGTTTGATGGGTTTTCAGCAATCTGTCTTGATCATCATACTACAGTAAATAATCAGGA]




>consensus_9954#0
ACATACTCATAGCCAATCTATTTGTTTGAACGATGCCTCCAAAAAGAAATGTAAGAAATA
AGGATAGTGAAGACGAAAGTGTTAGAGCTAATGCTAACAACAACGAGGGAAAAAACGCAA
AGTCAGGAAATAAAAAAAATAGGGATGACGAAGATGAAAGTGTTAGAGCTGATACTAACA
ACAATGAGAAAAAAAACACAAAGTCAGGGAATAAAAAAAACAAGGGGAAAGCTGTTAGTC
ACGTTCCTTCGGATTCTGAAGAGGATAAAGTAATTACAGACGACTCTAATGCAAAAAGAA
AAGAGAAAAAAAAGAAAGGGAAAGAACTGTCAGTTAATGATTTAGTTGAAAAACAAAATG
ACACAAAAATAACAAAGGAAAGTCATAAGTCCAGTAACGAATCTCTCAAATCAGATGAAG
TTGATGACGAATTTTACAAAAAGAAAAGAAAGGCGGGACGTAATACTGTTAAACGTGCAG
ATTCTGAAGACGAAAGGGATGCAAATAAGGCATCAAATAAAAAACAGGGGAAAAAGAAAG
GTAAATTAAATGCGATTGATGCAGAACAAAGGGGTCAAAAAGCTGATATCCAACAAAAAA
CAGAAGTTTGTGATTCCAAAATGGATTCCAATCGTGAAACTCAACAAAAGAATTATGAAC
TTGATGAGGAATCTACAAAACCTGAAGAAATTGATGACGATTTTTATACAAAGAAAAGAA
AAGCCGGTCGTGGAAAACAAAAGCAAGGACCAGAACATGGAGAACTACCTAATCAAAATG
CAACTGGTAAGAAAAAGAAACAGAAACCCGGAAAAAAGAAACATGATGATGGATTCGATA
GTGAACAAGAAGACCTTGATGGTTTGGCCAAAGCCATGACAGTTGTTTCTTTAGATAGTG
AAATAGATGATCTCGATCTTCAAAGTACGAAGTTTGATGGGTTTTCAGCAATCTGTCTTG
ATCATCATACTACAGTAAATAATCAGGA

consensusID : consensus_9954#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 760
fasta sequence

                              [ATCTGTCTTGATCATCATACTACAGTAAATAATCAGGACACAGTCGACGATGTCCAAATTATATCTGATGACCCCTTAGAGAGTAAACCCCAGATTGACGTCGCAAAATCAAAGCCACCTATTGATAATGATATTAATTCACTGACAGACAAGTGTTCAACTACTGATATAAAATTGGAGGATGATACCTGCTCTAAACCAACTTTAGTTGAAGAAAACGTCACAGAAAGTGATGCTAATGCCGTAAAACCAAAAGTATCAAAGAAGGAGCTTAAAAAGCTTAAAAAGAAAGAGGAGTTTGAAAAACTTGTTGAAAATGCAAAAGCTAAAATTATCGCATCTTCTGGAACACTCGAGAACTTTGCACTTTCTCAAGCTTCTGGTAATGCAAAATCTGAACAACAAGACAATCAGCTTGATATACGGGTTGAAAATTTCTCGATTGCTGCTAAAGGAAAAGATCTATTTGTAAATGCATCCCTTCAAATTACTCATGGCCGTCGTTATGGATTAGTGGGACCTAATGGCTATGGGAAAACTACGTTACTTCGCCATATTGCTACTCGAGCGATCAACATCCCTGCAAATATCGATGTGCTTCTTTGTGAACAAGAAGTTGTAGCTGACTCAACACCCGCATTTGAAATGGTTCTCAGATCGGATAAAAGACGATTAGAATTATTAGAAGAATGTGAAAAGCTGAAATCTCTTTTAGAAACAGATCACAGTCCATCTGTAGTTGACAAGTTTAATGAGGTTT]

[-] EMBL CD116520             [ATCTGTCTTGATCATCATACTACAGTAAATAATCAGGACACAGTCGACGATGTCCAAATTATATCTGATGACCCCTTAGAGAGTAAACCCCAGATTGACGTCGCAAAATCAAAGCCACCTATTGATAATGATATTAATTCACTGACAGACAAGCGTTCAACTACTGATATAAAATTGGAGGATGATACCTGCTCTAAACCAACTTTAGTTGAAGAAAACGTCACAGAAAGTGATGCTAATGCCGTAAAACCAAAAGTATCAAAGAAGGAGCTTAAAAAGCTTAAAAAGAAAGAGGAGTTTGAAAAACTTGTTGAAAATGCAAAAGCTAAAATTATCGCATCTTCTGGAACACTCGAGAACTTTGCACTTTCTCAAGCTTCTGGTAATGCAAAATCTGAACAACAAGACAATCAGCTTGATATACGGGTTGAAAATTTCTCGATTGCTGCTAAAGGAAAAGATCTATTTGTAAATGCATCCCTTCAAATTACTCATGGCCGTCG                                                                                                                                                                                                                                                                 ]
[+] EMBL CD195472             [                                                                                GAGTAAACCCCAGATTGACGTCGCAAAATCAAAGCCACCTATTGATAATGATATTAATTCACTGACAGACAAGTGTTCAACTACTGATATAAAATTGGAGGATGATACCTGCTCTAAACCAACTTTAGTTGAAGAAAACGTCACAGAAAGTGATGCTAATGCCGTAAAACCAAAAGTATCAAAGAAGGAGCTTAAAAAGCTTAAAAAGAAAGAGGAGTTTGAAAAACTTGTTGAAAATGCAAAAGCTAAAATTATCGCATCTTCTGGAACACTCGAGAACTTTGCACTTTCTCAAGCTTCTGGTAATGCAAAATCTGAACAACAAGACAATCAGCATGATATACGGGTTGAAAATTTCTCGATTGCTGCTAAAGGAAAAGATCTATTTGTAAATGCATCCCTTCAAATTACTCATGGCCGTCGTTATGGATTAGT                                                                                                                                                                                                                                                     ]
[+] EMBL CD064961             [                                                                                                                         TTGATAATGATATTAATTCACTGACAGACAAGTGTTCAACTACTGATATAAAATTGGAGGATGATACCTGCTCTAAACCAACTTTAGTTGAAGAAAACGTCACAGAAAGTGATGCTAATGCCGTAAAACCAAAAGTATCAAAGAAGGAGCTTAAAAAGCTTAAAAAGAAAGAGGAGTTTGAAAAACTTGTTGAAAATGCAAAAGCTAAAATTATCGCATCTTCTGGAACACACGAGAACTTTGCACTTTCTCAAGCTTCTGGTAATGCAAAATCTGAACAACAAGACAATCAGCTTGATATACGGGTTGAAAATTTCTCGATTGCTGCTAAAGGAAAAGATCTATTTGTAAATGCATCCCTTCAAATTACTCATGGCCGTCGTTATGGATTAGTGGGACCTAATGGCTATGGGAAAACTACGTTACTT                                                                                                                                                                                                                   ]
[+] EMBL CD186609             [                                                                                                                                                                                                                                                                                                                                                                   AGAACTTTGCACTTTCTCAAGCTTCTGGTAATGCAAAATCTGAACAACAAGACAATCAGCTTGATATACGGGTTGAAAATTTCTCGATTGCTGCTAAAGGAAAAGATCTATTTGTAAATGCATCCCTTCAAATTACTCATGGCCGTCGTTATGGATTAGTGGGACCTAATGGCTATGGGAAAACGACGTTACTTCGCCATATTGCTACTCGAGCGATCAACATCCCTGCAAATATCGATGTGCTTCTTTGTGAACAAGAAGTTGTAGCTGACTCAACACCCGCATTTGAAATGGTTCTCAGATCGGATAAAAGACGATTAGAATTATTAGAAGAATGTGAAAAGCTGAAATCTCTTTTAGAAACAGATCACAGTCCATCTGTAGTTGACAAGTTTAATGAGGTTT]




>consensus_9954#1
ATCTGTCTTGATCATCATACTACAGTAAATAATCAGGACACAGTCGACGATGTCCAAATT
ATATCTGATGACCCCTTAGAGAGTAAACCCCAGATTGACGTCGCAAAATCAAAGCCACCT
ATTGATAATGATATTAATTCACTGACAGACAAGTGTTCAACTACTGATATAAAATTGGAG
GATGATACCTGCTCTAAACCAACTTTAGTTGAAGAAAACGTCACAGAAAGTGATGCTAAT
GCCGTAAAACCAAAAGTATCAAAGAAGGAGCTTAAAAAGCTTAAAAAGAAAGAGGAGTTT
GAAAAACTTGTTGAAAATGCAAAAGCTAAAATTATCGCATCTTCTGGAACACTCGAGAAC
TTTGCACTTTCTCAAGCTTCTGGTAATGCAAAATCTGAACAACAAGACAATCAGCTTGAT
ATACGGGTTGAAAATTTCTCGATTGCTGCTAAAGGAAAAGATCTATTTGTAAATGCATCC
CTTCAAATTACTCATGGCCGTCGTTATGGATTAGTGGGACCTAATGGCTATGGGAAAACT
ACGTTACTTCGCCATATTGCTACTCGAGCGATCAACATCCCTGCAAATATCGATGTGCTT
CTTTGTGAACAAGAAGTTGTAGCTGACTCAACACCCGCATTTGAAATGGTTCTCAGATCG
GATAAAAGACGATTAGAATTATTAGAAGAATGTGAAAAGCTGAAATCTCTTTTAGAAACA
GATCACAGTCCATCTGTAGTTGACAAGTTTAATGAGGTTT

consensusID : consensus_9954#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 577
fasta sequence

                              [TGTTACTAGGGATGAGGGTGAGGCGTAACTTTCAGTTGTTGTCGCTTCAGTGCTCTGACCATTTGGAAGTCCTTGTGTAGAACTTGTACGGACCTGATTATCGCCAAATTGAGTTTGGGAAAATTCTCTTGATAAAACTGCGATACAGCTACAACAAGTCAAACTAATTCGGAGACTACATACTCATAGCCAATCTATTTGTTTGAACGATGCCTCCAAAAAGAAATGTAAGAAATAAGGATAGTGAAGACGAAAGTGTTAGAGCTAATGCTAACAACAACGAGGGAAAAAACGCAAAGTCAGGAAATAAAAAAAATAGGGATGACGAAGATGAAAGTGTTAGAGCTGATACTAACAACAATGAGAAAAAAAACACAAAGTCAGGGAATAAAAAAAACAAGGGGAAAGCTGTTAGTCACGTTCCTTCGGATTCTGAAGAGGATAAAGTAATTACAGACGACTCTAATGCAAAAAGAAAAGAGAAAAAAAAGAAAGGGAAAGAACTGTCAGTTAATGATTTAGTTGAAAAACAAAATGACACAAAAATAACAAAGGAAAGTCATAAGTTTAACAACCC]

[+] EMBL CD134200             [TGTTACTAGGGATGAGGGTGAGGCGTAACTTTCAGTTGTTGTCGCTTCAGTGCTCTGACCATTTGGAAGTCCTTGTGTAGAACTTGTACGGACCTGATTATCGCCAAATTGAGTTTGGGAAAATTCTCTTGATAAAACTGCGATACAGCTACAACAAGTCAAACTAATTCGGAGACTACATACTCATAGCCAATCTATTTGTTTGAACGATGCCTCCAAAAAGAAATGTAAGAAATAAGGATAGTGAAGACGAAAGTGTTAGAGCTAATGCTAACAACAACGAGGGAAAAAACGCAAAGTCAGGAAATAAAAAAAATAGGGATGACGAAGATGAAAGTGTTAGAGCTGATACTAACAACAATGAGAAAAAAAACACAAAGTCAGGGAATAAAAAAAACAAGGGGAAAGCTGTTAGTCACGTTCCTTCGGATTCTGAAGAGGATAAAGTAATTACAGACGACTCTAATGCAAAAAGAAAAGAGAAAAAAAAGAAAGGGAAAGAACTGTCAGTTAATGATTTAGTTGAAAAACAAAATGACACAAAAATAACAAAGGAAAGTCATAAGTTTAACAACCC]




>consensus_9954#2
TGTTACTAGGGATGAGGGTGAGGCGTAACTTTCAGTTGTTGTCGCTTCAGTGCTCTGACC
ATTTGGAAGTCCTTGTGTAGAACTTGTACGGACCTGATTATCGCCAAATTGAGTTTGGGA
AAATTCTCTTGATAAAACTGCGATACAGCTACAACAAGTCAAACTAATTCGGAGACTACA
TACTCATAGCCAATCTATTTGTTTGAACGATGCCTCCAAAAAGAAATGTAAGAAATAAGG
ATAGTGAAGACGAAAGTGTTAGAGCTAATGCTAACAACAACGAGGGAAAAAACGCAAAGT
CAGGAAATAAAAAAAATAGGGATGACGAAGATGAAAGTGTTAGAGCTGATACTAACAACA
ATGAGAAAAAAAACACAAAGTCAGGGAATAAAAAAAACAAGGGGAAAGCTGTTAGTCACG
TTCCTTCGGATTCTGAAGAGGATAAAGTAATTACAGACGACTCTAATGCAAAAAGAAAAG
AGAAAAAAAAGAAAGGGAAAGAACTGTCAGTTAATGATTTAGTTGAAAAACAAAATGACA
CAAAAATAACAAAGGAAAGTCATAAGTTTAACAACCC

consensusID : consensus_9954#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 273
fasta sequence

                              [TAAAACAGACAATCGAAGAGACAGAGAAAAAAACAGTACAAAAAAACATAATAAATCAATATATTCGAAGGGTAAGAAAAAGAAACAGAAACCCGGAAAAAAGAAACATGATGATGGATTCGATAGTGAACAAGAAGACCTTGATGGTTTGGCCAAAGCCATGACAGTTGTTTCTTTAGATAGTGAAATAGATGATCTCGATCTTCAAAGTACGAAGTTTGATGGGTTTTCAGCAATCTGTCTTGATCATCATACTACAGTAAATAATCAGGA]

[+] EMBL CD192730             [TAAAACAGACAATCGAAGAGACAGAGAAAAAAACAGTACAAAAAAACATAATAAATCAATATATTCGAAGGGTAAGAAAAAGAAACAGAAACCCGGAAAAAAGAAACATGATGATGGATTCGATAGTGAACAAGAAGACCTTGATGGTTTGGCCAAAGCCATGACAGTTGTTTCTTTAGATAGTGAAATAGATGATCTCGATCTTCAAAGTACGAAGTTTGATGGGTTTTCAGCAATCTGTCTTGATCATCATACTACAGTAAATAATCAGGA]




>consensus_9954#3
TAAAACAGACAATCGAAGAGACAGAGAAAAAAACAGTACAAAAAAACATAATAAATCAAT
ATATTCGAAGGGTAAGAAAAAGAAACAGAAACCCGGAAAAAAGAAACATGATGATGGATT
CGATAGTGAACAAGAAGACCTTGATGGTTTGGCCAAAGCCATGACAGTTGTTTCTTTAGA
TAGTGAAATAGATGATCTCGATCTTCAAAGTACGAAGTTTGATGGGTTTTCAGCAATCTG
TCTTGATCATCATACTACAGTAAATAATCAGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9954#0      ACATACTCATAGCCAATCTATTTGTTTGAACGATGCCTCCAAAAAGAAATGTAAGAAATA 60
consensus_9954#3      ------------------------------------------------------------
consensus_9954#2      ------------------------------------------------------------
consensus_9954#1      ------------------------------------------------------------
                                                                                  

consensus_9954#0      AGGATAGTGAAGACGAAAGTGTTAGAGCTAATGCTAACAACAACGAGGGAAAAAACGCAA 120
consensus_9954#3      ------------------------------------------------------------
consensus_9954#2      ------------------------------------------------------------
consensus_9954#1      ------------------------------------------------------------
                                                                                  

consensus_9954#0      AGTCAGGAAATAAAAAAAATAGGGATGACGAAGATGAAAGTGTTAGAGCTGATACTAACA 180
consensus_9954#3      ------------------------------------------------------------
consensus_9954#2      ------------------------------------------------------------
consensus_9954#1      ------------------------------------------------------------
                                                                                  

consensus_9954#0      ACAATGAGAAAAAAAACACAAAGTCAGGGAATAAAAAAAACAAGGGGAAAGCTGTTAGTC 240
consensus_9954#3      ------------------------------------------------------------
consensus_9954#2      ------------------------------------------------------------
consensus_9954#1      --------------------------------------------------------ATCT 4
                                                                                  

consensus_9954#0      ACGTTCCTTCGGATTCTGAAGAGGATAAAGTAATTACAGACGACTCTAATGCAAAAAGAA 300
consensus_9954#3      ------------------------------------------------------------
consensus_9954#2      ------------------------------------------------------------
consensus_9954#1      GTCTTGATCATCATACTACAGTAAATAATCAGGACACAGTCGAC---GATGTCCAAATTA 61
                                                                                  

consensus_9954#0      AAGAGAAAAAAAAGAAAGGGAAAGAACTGTCAGTTAATGATTTAGTTGAAAAACAAAATG 360
consensus_9954#3      ------------------------------------------------------------
consensus_9954#2      ------------------------------------------------------------
consensus_9954#1      TATCTGATGACCCCTTAGAGAGTAAACCCCAGATTGACGTCGCAAAATCAAAGCCACCTA 121
                                                                                  

consensus_9954#0      ACACAAAAATAACAAAGGAAAGTCATAAGTCCAGTAACGAATCTCTCAAATCAGATGAAG 420
consensus_9954#3      ------------------------------------------------------------
consensus_9954#2      ------------------------------------------------------------
consensus_9954#1      TT--GATAATGATATTAATTCACTGACAGACAAGTGTTCAACTACTGATATAAAATTG-G 178
                                                                                  

consensus_9954#0      TTGATGACGAATTTTACAAAAAGAAAAGAAAGGCGGGACGTAATACTGTTAAACGTGCAG 480
consensus_9954#3      ------------------------------------------------------------
consensus_9954#2      -----------TGTTACTAGGGATGAGGGTGAGGCGTAACTTTCAGTTGTTGTCGCTTCA 49
consensus_9954#1      AGGATGATACCTGCTCTAAACCAACTTTAGTTGAAGAAAACGTCACAGAAAGTGATGCTA 238
                                                                                  

consensus_9954#0      ATTCTGAAGACGAAAGGGATGCAAATAAGGCATCAAATAAAAAACAGGGGAAAAAGAAAG 540
consensus_9954#3      ------------------------------------------------------------
consensus_9954#2      GTGCTCTGACCATTTGGAAGTCCTTGTGTAGAACTTGTACGGACCTGATTATCGCCAAAT 109
consensus_9954#1      ATGCCGTAAA-ACCAAAAGTATCAAAGAAGGAGCT--TAAAAAGC---TTAAAAAGAAAG 292
                                                                                  

consensus_9954#0      GTAAATTAAATGCGATTGATGCAGAACAAAGGGGTCAAAAAGCTGATA-TCCAACAAAAA 599
consensus_9954#3      ------------------------------------------------------------
consensus_9954#2      TGAGTTTGGGAAAATTCTCTTGATAAAACTGCGATACAGCTACAACAA-GTCAAACTAAT 168
consensus_9954#1      AGGAGTTTGAAAAACTTGTTGAAAATGCAAAAGCTAAAATTATCGCATCTTCTGGAACAC 352
                                                                                  

consensus_9954#0      ACAGAAGTTTGTGATTCCAAAATGGATTCCAATCGTGAA--ACTC-AACAAAAGAATTAT 656
consensus_9954#3      ------------------------------------------------------------
consensus_9954#2      TCGGAGACTACATACTCATAGCCAATCTATTTGTTTGAACGATGC-CTCCAAAAAGAAAT 227
consensus_9954#1      TCGAGAACTTTGCACTT-TCTCAAGCTTCTGGTAATGCAAAATCTGAACAACAAGACAAT 411
                                                                                  

consensus_9954#0      GAACTTGATGAGGAATCTACAAAACCTGAAGAAATTGATGACGATTTTTATACAAAGAAA 716
consensus_9954#3      -----------------------------------------------------------T 1
consensus_9954#2      GTAAGAAATAAGGATAGTGAAGACGAAAGTGTTAGAGCTAATGCTAACAACAACGAGGGA 287
consensus_9954#1      CAGCTTGATATACGGGTTGAAAATTTCTCGATTGCTGCTAAAGGAAAAGATCTATTTGTA 471
                                                                                  

consensus_9954#0      AGAAAAGCCGGTCGTGGAAAACAAAAGCA-AGGACCAGAACATGGAGAACTACCTAATC- 774
consensus_9954#3      AAAACAGACAATCGAAGAGAC--AGAGAA-AAAAACAGTACAAAAAAACATAATAAATC- 57
consensus_9954#2      AAAAACGCAAAGTCAGGAAATAAAAAAAATAGGGATGACGAAGATGAAAGTGTTAGAGCT 347
consensus_9954#1      AATGCATCCCTTCAAATTACTCATGGCCGTCGTTATGGATTAGTGGGACCTAATGGCTAT 531
                      *                                        *     *  *         

consensus_9954#0      AAAATG--CAACTGGTAAGAAAAAGAAACAGAAACCCGGAA-AAAAGAAACATGATGATG 831
consensus_9954#3      AATATATTCGAAGGGTAAGAAAAAGAAACAGAAACCCGGAA-AAAAGAAACATGATGATG 116
consensus_9954#2      GATACTAACAACAATGAGAAAAAAAACACAAAGTCAGGGAATAAAAAAAACAAGGGGAAA 407
consensus_9954#1      GGGAAAACTACGTTACTTCGCCATATTGCTACTCGAGCGATCAACATCCCTGCAAATATC 591
                         *                  *     *         **  ** *           *  

consensus_9954#0      GAT----TCGATAGTGAACAAGAAGACCTTGATGGTTTGGCCAAAGCCATGACAGTTGTT 887
consensus_9954#3      GAT----TCGATAGTGAACAAGAAGACCTTGATGGTTTGGCCAAAGCCATGACAGTTGTT 172
consensus_9954#2      GCTG---TTAGTCACGTTCCTTCGGATTCTGAAGA---GGATAAAGTAATTACAGACGAC 461
consensus_9954#1      GATGTGCTTCTTTGTGAACAAGAAGTTGTAGCTGACT-CAACACCCGCATTTGAAATGGT 650
                      * *    *   *   *  *     *     *  *        *     **   *   *  

consensus_9954#0      TCT--TTAGATAGTGAAATAGATGATCTCGATCTTCAAAGTAC-GAAGTTTGATGGGT-T 943
consensus_9954#3      TCT--TTAGATAGTGAAATAGATGATCTCGATCTTCAAAGTAC-GAAGTTTGATGGGT-T 228
consensus_9954#2      TCTAATGCAAAAAGAAAAGAGAAAAAAAAGAAAGGGAAAGAACTGTCAGTTAATGATT-T 520
consensus_9954#1      TCTCAGATCGGATAAAAGACGATTAGAATTATTAGAAGAATGTGAAAAGCTGAAATCTCT 710
                      ***        *   **   **  *     *     * *           * *    * *

consensus_9954#0      TTCAGCAATCTGTCTTGATCATCATACTACAGTAAATAATCAGGA------------ 988
consensus_9954#3      TTCAGCAATCTGTCTTGATCATCATACTACAGTAAATAATCAGGA------------ 273
consensus_9954#2      AGTTGAAAAACAAAATGACACAAAAATAACAAAGGAAAGTCATAAGTTTAACAACCC 577
consensus_9954#1      TTTAGAAACAGATCACAGTCCATCTGTAGTTGACAAGTTTAATGAGGTTT------- 760
                          * **                           *   * *  *