cluster # 9959

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Schistosoma mansoni
cluster # 9959 cluster # 9959 Sequences # 12 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9959#0 length = 998 sequences # 12
consensusID : consensus_9959#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 998
fasta sequence
                              [AAGCGACTGAGAATTCTTCGTTACCCTTTACACACTCATCGACAAACAGTTCAAGGGACTCTAAAAATATCAGCCAAGATGAGGAGGGAACTCAAAATAATTTAAAAGCTTCTGTATTTAAACATGAACCACGGAAGCGCAAGTCACGGAATTACAGTAGCACAGTAATGGTGGAAGTAAATACAACCGGTCAGACAAATTCGTCATTTTTCCATTCTAATGAGAATATCATAACCAAAGGTGATGCCAAAAGTACTTTAAACTCTGATCAGGAATACCAATCTTCTTCCTGTGCGACGACTGTACCTATTCAACTAACTAACGCTTCAGGGGTTACGCCTAGTACTATGTGTGAACAATTATCTTATCCTT-TCAGTCATAATGTAATCACTCATACCTCATCATCTGTTTCCAGTCGACCAAAGTGTTCAATAAATCATGCTCCACTTTCATCGAATGCAGTTCGAAGGTCAATGAGTACTTCACGTAGACCAATATTACCAAATCACCTAAGGAAGTATCCAAATACTTTATTACTTAACACCAGGCTA-GGTTTCAAATCTGTCTGT-AATACAGCTGCAATACAATCAATTCATCACATAAGATCAGATCTCAAGCCTATACCCTGTCATGATAGGCCACCATTCACACAGTATCATCGACAAAATGTCTCCTCTGCTANTAATGAATCCCCTAATAGGAAACGAAAGAGCACTTCAACTCGTGAAAACAAACCATCAATTCTTAAGCCATTTATCATTGCTTCAAAAACTGGTAGTGTTGTTACCAGTTCCAATACAGGTGTAATCACTCCATCTTTTAAAATAGACGCTTTACCAAGTTATATTATTGCAAACTTCATTCCAACGAATCTAGCATATGTGAATACGGTTTATTATTCATCTCCTGAAGAAGATTTTTTGTGGAAATCACAATTTTTCGGTAAGAAGAATGCTCAACAATTGATTCACACAGTAATCAGCTTATGTGCATGATCA]

[+] EMBL CD194446             [AAGCGACTGAGAATTCTTCGTTACCCTTTACACACTCATCGACAAACAGTTCAAGGGACTCTAAAAATATCAGCCAAGATGAGGAGGGAACTCAAAATAATTTAAAAGCTTCTGTATTTAAACATGAACCACGGAAGCGCAAGTCACGGAATTACAGTAGCACAGTAATGGTGGAAGTAAATACAACCGGTCAGACAAATTCGTCATTTTTCCATTCTAATGAGAATATCATAACCAAAGGTGATGCCAAAAGTACTTTAAACTCTGATCAGGAATACCAATCTTCTTCCTGTGCGACGACTGTACCTATTCAACTAACTAACGCTTCAGGGGTTACGCCTAGTACTATGTGTGAACAATTATCTTATCCTT TCAGTCATAATGTAATCACTCATACCTCATCATCTGTTTCCAGTCGACCAAAGTGTTCAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD157743             [                                                                                                                                                                                                                                                                                                                                       tcGGGGTTACGCCTAGTACTATGTGTGAACAATTATCTTATCCTT TCAGTCATAATGTAATCACTCATACCTCATCATCTGTTTCCAGTCGACCAAAGTGTTCAATAAATCATGCTCCACTTTCATCGAATGCAGTTCGAAGGTCAATGAGTCCTTCACGTAGACCAATATTACCAAATCACCTAAGGAAGTATCCAAATACTTAATTACTTAACACCAGGCTA GGTTTCAAATCTGTCTGT AATACAGCTGCAATACAATCAATTCATCACATAAGATCAGATCTCAAGCCTATACCCTGTCATGATAGGCCACCATTCACACAGT                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD157588             [                                                                                                                                                                                                                                                                                                                                                           ATGTGTGAACAATTATCTTATCCTT TCAGTCATAATGTAATCACTCATACCTCATCATCTGTTTCCAGTCGACCAAAGTGTTCAATAAATCATGCTCCACTTTCATCGAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD090350             [                                                                                                                                                                                                                                                                                                                                                           ATGTGTGAACAATTATCTTATCCTT TCAGTCATAATGTAATCACTCATACCTCATCATCTGTTTCCAGTCGACCAAAGTGTTCAATAAATCATGCTCCACTTTCATCGAATGCAGTTCGAAGGTCAATGAGTACTTCACGTAGACCAATATTACCAAATCACCTAAGGAAGTATCCAAATACTTTATTACTTAACACCAGGCTA GGTCTCANATCTGTCTGTAAATACAGCTGC ATACAATCAATTCATCACAT                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD157572             [                                                                                                                                                                                                                                                                                                                                                           ATGTGTGAACAATTATCTTATCCTT TCAGTCATAATGTAATCACTCATACCTCATCATCTGTTTCCAGTCGACCAAAGTGTTCAATAAATCATGCTCCACTTTCATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD090395             [                                                                                                                                                                                                                                                                                                                                                                           tgTATCCTTGTGAG AAAAATGTAATCACTCATACCTCATCATCTGTTTCCAGTCGACCAAAGTGTTCAATAAATCATGCTCCACTTTCATCGAATGCAGTTCGAAGGTCAATGAGTACTTCACGTAGACCAATATTACCAAATCACCTAAGGAAGTATCCAAATACTTTATTACTTAACACCAGGCTA GGTTTCAAATCTGTCTGT AATACAGCTGCAATACAATCAATTCATCACATAAGATCAGATCTNCAGCCTATACCCTGTCATGATAGGCCACCATTCACACAGTATCATCGACAAAATGTCTCCTCTGCTANTAATGAATCCC                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD157680             [                                                                                                                                                                                                                                                                                                                                                                           ttgATCCTT GTAGGAATAATGTAATCACTCATACCTCATCATCTGTTTCCAGTCGACCAAAGTGTTCAATAAATCATGCTCCACTTTCATCGAATGCAGTTCGAAGGTCAATGAGTACTTCACGTAGACCAATATTACCAAATCACCTAAGGAAGTATCCAAATACTTTATTACTTAACACCAGGCTA GGTTTCAAATCTGTCTGT  ATACAGCTGC ATACAATCAA TCATCACAT AGATCAG                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD090373             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  caGCTAGGGTTTCAAATCTGTCTGT AATACAGCTGCAATACAATCAATTCATCACATAAGATCAGATCTCAAGCCTATACCCTGTCATGATAGGCCACCATTCACACAGTATCATCGACAAAATGTCTCCTCTGCTATAAATGAATCCTCTAATAGGAAACGAAAGAGCACTTCAACTCGTGAAAACAAACCATCAATTCTTAAGCCATTTATCATTGCTTCAAAAACTGGTAGTGTTGTTACCAGTTCCAATACAGGTGTAATCACTCCATCTTTTAAAATAGACGCTTTACCAAGTTATATTATTGCAAACTTCATTCCAACGAATCTAGCATATGTGAGTACGGTTTATTATTCATCT                                                                                             ]
[-] EMBL CD147970             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAACAAACCATCAATTCTTAAGCCATTTATCATTGCTTCAAAAACTGGTAGTGTTGTTACCAGTTCCAATACAGGTGTAATCACTCCATCTTTTAAAATA                                                                                                                                                                           ]
[-] EMBL CD157688             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTTANAATAGACGCTTTACCAAGTTATATTATTGCAAACTTCATTCCAACGAATCTAGCATATGTGAATACGGTTTATTATTCATCTCCTGAAGAAGATTTTTTGTGGAAATCACAATTTTTCGGTAAGAAGAATGCTC                                         ]
[-] EMBL CD090364             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TAGACGCTTTACCAAGTTATATTATTGCAAACTTCATTCCAACGAATCTAGCATATGTGAATACGGTTTATTATTCATCTCCTGAAGAAGATTTTTTGTGGAAATCACAATTTTTCGGTAAGAAGAATGCTCAACAATTGATTCACACAGTAATCAGCTTATGTGCATG    ]
[-] EMBL CD157782             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGAATGTAGCATATGTGAATACGGTTTATTATTCATCTCCTGAAGAAGATTTTTTGTGGAAATCACAATTTTTCGGTAAGAAGAATGCTCAGCAATTGATTTACACATTAATTTACTTATTTGCcaaatca]




>consensus_9959#0
AAGCGACTGAGAATTCTTCGTTACCCTTTACACACTCATCGACAAACAGTTCAAGGGACT
CTAAAAATATCAGCCAAGATGAGGAGGGAACTCAAAATAATTTAAAAGCTTCTGTATTTA
AACATGAACCACGGAAGCGCAAGTCACGGAATTACAGTAGCACAGTAATGGTGGAAGTAA
ATACAACCGGTCAGACAAATTCGTCATTTTTCCATTCTAATGAGAATATCATAACCAAAG
GTGATGCCAAAAGTACTTTAAACTCTGATCAGGAATACCAATCTTCTTCCTGTGCGACGA
CTGTACCTATTCAACTAACTAACGCTTCAGGGGTTACGCCTAGTACTATGTGTGAACAAT
TATCTTATCCTTTCAGTCATAATGTAATCACTCATACCTCATCATCTGTTTCCAGTCGAC
CAAAGTGTTCAATAAATCATGCTCCACTTTCATCGAATGCAGTTCGAAGGTCAATGAGTA
CTTCACGTAGACCAATATTACCAAATCACCTAAGGAAGTATCCAAATACTTTATTACTTA
ACACCAGGCTAGGTTTCAAATCTGTCTGTAATACAGCTGCAATACAATCAATTCATCACA
TAAGATCAGATCTCAAGCCTATACCCTGTCATGATAGGCCACCATTCACACAGTATCATC
GACAAAATGTCTCCTCTGCTANTAATGAATCCCCTAATAGGAAACGAAAGAGCACTTCAA
CTCGTGAAAACAAACCATCAATTCTTAAGCCATTTATCATTGCTTCAAAAACTGGTAGTG
TTGTTACCAGTTCCAATACAGGTGTAATCACTCCATCTTTTAAAATAGACGCTTTACCAA
GTTATATTATTGCAAACTTCATTCCAACGAATCTAGCATATGTGAATACGGTTTATTATT
CATCTCCTGAAGAAGATTTTTTGTGGAAATCACAATTTTTCGGTAAGAAGAATGCTCAAC
AATTGATTCACACAGTAATCAGCTTATGTGCATGATCA
clustalw multiple alignements is not computed in this case