cluster # 9963

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Schistosoma mansoni
cluster # 9963 cluster # 9963 Sequences # 12 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9963#0 length = 900 sequences # 8
consensus_9963#1 length = 440 sequences # 2

consensus_9963#2 length = 270 sequences # 1
consensus_9963#3 length = 169 sequences # 1

consensusID : consensus_9963#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 900
fasta sequence

                              [CGGTACCCAAACGTCCAACCGTTTCCATTTACAACTAAATCTTTATTTGTCGGACACACAGATTATAAAAATTTACGATGGCAAGTAATTGATACACCTGGTGTATTAAATAGACCTTTGGACGAACATAACACAATCGAAATGCTATCCATTACAGCACTTGCACATCTACAAGCTGCTGTAATATATATCATGGATTTGTCTGAACAATGTGGATATACTATACAACAGCAATTAACGTTATTCCAAAACTTGAAACCTCTTTTCCGTAACAAACCTCTTGTAATAGCCGCTAACAAAGTTGATATTAAACCATTTGAAGAACTATCTGAAGAAGATAAACAATCAATTAATAGTATTGTCCAGTGGCATACTGATAAACAGGTCAGAGATCCAGATCGACCAATCTTTGTTGAAATGTCCACTGTTACTGAAGTTGGTTTAGTGACTGTTCGTTCAGTTGCATGTGACGACTTGTTAGCTCAACGTGTACAAGCGAAAATTCGAGCTGCTACTCTGCCAGGCGGTAATGTTGATATTTCTAATCGGTTGTATATAGCTAAACCGAAACCAGACGAAAATAAGACAGATGCACCATCTC-GTCCACCAATAATTCCCGACGGTG-TTCTAGATAAACAAAAGAAACGTATACTTAAACGTCTTCGTATTGCTAATTCACTACAACCTTACTCGCAACTTGAAGACGAAG-ATGACAACCCATCGAAACGTCGAACAATGCGTGATCGTGAACCAGATGCTGATCCTGATGAAGGCTTCATATTGAATTTAAGAGAGCATTGGCGTATAAAATGTCCTGAAGAGGCAAATGATATAGTCCCTGAGATTTTGAATGGACATAACCTGATCGACCTATTCGATCCTGAAATTGAGGAGAAGCTG]

[+] EMBL CD129396             [CGGTACCCAAACGTCCAACCGTTTCCATTTACAACTAAATCTTTATTTGTCGGACACACAGATTATAAAAATTTACGATGGCAAGTAATTGATACACCTGGTGTATTAAATAGACCTTTGGACGAACATAACACAATCGAAATGCTATCCATTACAGCACTTGCACATCTACAAGCTGCTGTAATATATATCATGGATTTGTCTGAACAATGTGGATATACTATACAACAGCAATTAACGTTATTCCAAAACTTGAAACCTCTTTTCCGTAACAAACCTCTTGTAATAGCCGCTAACAAAGTTGATATTAAACCATTTGAAGAACTATCTGAAGAAGATAAACAATCAATTAATAGTATTGTCCAGTGGCATACTGATAAACAGGTCAGAGATCCAGATCGACCAATCTTTGTTGAAATGTCCACTGTTACTGAAGTTGGTTTAGTGACTGTTCGTTCAGTTGCATGTGACGACTTGTTAGCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD161364             [                                                                                                                          CGAACATAACACAATCGAAATGCTATCCATTACAGCACTTGCACATCTACAAGCTGCTGTAATATATATCATGGATTTGTCTGAACAATGTGGATATACTATACAACAGCAATTAACGTTATTCCAAAACTTGAAACCTCTTTTCCGTAACAAACCTCTTGTAATAGCCGCTAACAAAGTTGATATTAAACCATTTGAAGAACTATCTGAAGAAGATAAACAATCAATTAATAGTATTGTCCAGTGGCATACTGATAAACAGGTCAGAGATCCAGATCGACCAATCTTTGTTGAAATGTCCACTGTTACTGAAGTTGGTTTAGTGACTGTTCGTTCAGTTGCATGTGACGACTTGTTAGCTCAACGTGTACAAGCGAAAATTCGAGCTGCTACTCTGCCAGGCGGTAATGTTGATATTTCTAATCGGTTGTATATAGCTAAACCGAAACCAGACGAAAATAAGACAGATGCACCATCTC GTCCACCAATAATTCCCGACGGTG TTCTAGATAAACAAAAGAAACGTATACTTAAACGTCTTCGTATTGCTAATTCACTACAACCTTACTCGCAACTTGAAGACGAAGAATGA                                                                                                                                                                                           ]
[+] EMBL CD161306             [                                                                                                                          CGAACATAACACAATCGAAATGCTATCCATTACAGCACTTGCACATCTACAAGCTGCTGTAATATATATCATGGATTTGTCTGAACAATGTGGATATACTATACAACAGCAATTAACGTTATTCCAAAACTTGAAACCTCTTTTCCGTAACAAACCTCTTGTAATAGCCGCTAACAAAGTTGATATTAAACCATTTGAAGAACTATCTGAAGAAGATAAACAATCAATTAATAGTATTGTCCAGTGGCATACTGATAAACAGGTCAGAGATCCAGATCGACCAATCTTTGTTGAAATGTCCACTGTTACTGAAGTTGGTTTAGTGACTGTTCGTTCAGTTGCATGTGACGACTTGTTAGCTCAACGTGTACAAGCGAAAATTCGAGCTGCTACTCTGCCAGGCGGTAATGTTGATATTTCTAATCGGTTGTATATAGCTAAACCGAAACCAGACGAAAATAAGACAGATGCACCATCTC GTCCACCAATAATTCCCGACGGTG TTCTAGATAAACAAAAGAAACGTATACTTAAACGTCTTCGTATTGCTAATTCACTACAACCTTACTCGCAACTTGAAGACGAAG ATGAC                                                                                                                                                                                          ]
[-] EMBL CD161314             [                                                                                                                           GAACATAACACAATCGAAATGCTATCCATTACAGCACTTGCACATCTACAAGCTGCTGTAATATATATCATGGATTTGTCTGAACAATGTGGATATACTATACAACAGCAATTAACGTTATTCCAAAACTTGAAACCTCTTTTCCGTAACAAACCTCTTGTAATAGCCGCTAACAAAGTTGATATTAAACCATTTGAAGAACTATCTGAAGAAGATAAACAATCAATTAATAGTATTGTCCAGTGGCATACTGATAAACAGGTCAGAGATCCAGATCGACCAATCTTTGTTGAAATGTCCACTGTTACTGAAGTTGGTTTAGTGACTGTTCGTTCAGTTGCATGTGACGACTTGTTAGCTCAACGTGTACAAGCGAAAATTCGAGCTGCTACTCTGCCAGGCGGTAATGTTGATATTTCTAATCGGTTGTATATAGCTAAACCGAAACCAGACGAAAATAAGACAGATGCACCATCTC GTCCACCAATAATTCCCGACGGTG TTCTAGATAAACAAAAGAAACGTATACTTAAACGTCTTCGTATTGCTAATTCACTACAACCTTACTCGCAACTTGAAGA                                                                                                                                                                                                     ]
[-] EMBL CD148617             [                                                                                                                                              TGCTATCCATTACAGCACTTGCACATCTACAAGCTGCTGTAATATATATCATGGATTTGTCTGAACAATGTGGATATACTATACAACAGCAATTAACGTTATTCCAAAACTTGAAACCTCTTTTCCGTAACAAACCTCTTGTAATAGCCGCTAACAAAGTTGATATTAAACCATTTGAAGAACTATCTGAAGAAGATAAACAATCAATTAATAGTATTGTCCAGTGGCATACTGATAAACAGGTCAGAGATCCAGATCGACCAATC TTGTTGAGATGTCCACTGTTACTGAAGTTGGTTTAGTGACTGTTCGTTCAGTTGCATGTGACGCCTTGTTAGCTCAACGTGTACAAGCGAAAATTCGAGCTGCTACTCTGCCAGGCGGTAATGTTGATATTTCTAATCGGTTGTATATAGCTAAACCGAAACCAGACGAAAATAAGACAGATGCACCATCTC GTCCACCA                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD163522             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTTCGTTCAGTTGCATGTGACGACTTGTTAGCTCAACGTGTACAAGCGAAAATTCGAGCTGCTACTCTGCCAGGCGGTAATGTTGATATTTCTAATCGGTTGTATATAGCTAAACCGAAACCAGACGAAAATAAGACAGATGCACCATCTC GTCCACCAATAATTCCCGACGGTG TTCTAGATAAACAAAAGAAACGTATACTTAAACGTCTTCGTATTGCTAATTCACTACAACCTTACTCGCAACTTGAAGACGAAG ATGACAACCCATCGAAACGTCGAACAATGCGTGATCGTGAACCAGATGCTGATCCTGATGAAGGCTTCATATTGAATTTAAGAGAGCATTGGCGTATAAAATGTCCTGAAGAGGCAAATGATATAGTCCCTGAGATTTTGAATGGACATAACCTGATCGACCTATTCGAT                     ]
[+] EMBL CD161477             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GACGACTTGATAGCTCAACGTGTACAAGCGAAAATTCGAGCTGCTACTCTGCCAGGCGGCAATGTTGATATTTATAATCGGCTGTATATAGCTAAACCGAAACCAGACGAAAATAAGACAGATGCACCATCTCAGTCCACCAATAATTCCCGACGGTGATTCTTGATAAACAAAAGAAACGTATACCTAAACGTCTTCGTATTGCTAATTCACTACAACCTT                                                                                                                                                                                                                     ]
[+] EMBL CD148942             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTTGTTAGCTCAACGTGTACAAGCGAAAATTCGAGCTGCTACTCTGCCAGGCGGTAATGTTGATATTTCTAATCGGTTGTATATAGCTAAACCGAAACCAGACGAAAATAAGACAGATGCACCATCTC GTCCACCAATAATTCCCGACGGTG TTCTAGATAAACAAAAGAAACGTATACTTAAACGTCTTCGTATTGCTAATTCACTACAACCTTACTCGCAACTTGAAGACGAAG ATGACAACCCATCGAAACGTCGAACAATGCGTGATCGTGAACCAGATGCTGATCCTGATGAAGGCTTCATATTGAATTTAAGAGAGCATTGGCGTATAAAATGTCCTGAAGAGGCAAATGATATAGTCCCTGAGATTTTGAATGGACATAACCTGATCGACCTATTCGATCCTGAAATTGAGGAGAAGCTG]




>consensus_9963#0
CGGTACCCAAACGTCCAACCGTTTCCATTTACAACTAAATCTTTATTTGTCGGACACACA
GATTATAAAAATTTACGATGGCAAGTAATTGATACACCTGGTGTATTAAATAGACCTTTG
GACGAACATAACACAATCGAAATGCTATCCATTACAGCACTTGCACATCTACAAGCTGCT
GTAATATATATCATGGATTTGTCTGAACAATGTGGATATACTATACAACAGCAATTAACG
TTATTCCAAAACTTGAAACCTCTTTTCCGTAACAAACCTCTTGTAATAGCCGCTAACAAA
GTTGATATTAAACCATTTGAAGAACTATCTGAAGAAGATAAACAATCAATTAATAGTATT
GTCCAGTGGCATACTGATAAACAGGTCAGAGATCCAGATCGACCAATCTTTGTTGAAATG
TCCACTGTTACTGAAGTTGGTTTAGTGACTGTTCGTTCAGTTGCATGTGACGACTTGTTA
GCTCAACGTGTACAAGCGAAAATTCGAGCTGCTACTCTGCCAGGCGGTAATGTTGATATT
TCTAATCGGTTGTATATAGCTAAACCGAAACCAGACGAAAATAAGACAGATGCACCATCT
CGTCCACCAATAATTCCCGACGGTGTTCTAGATAAACAAAAGAAACGTATACTTAAACGT
CTTCGTATTGCTAATTCACTACAACCTTACTCGCAACTTGAAGACGAAGATGACAACCCA
TCGAAACGTCGAACAATGCGTGATCGTGAACCAGATGCTGATCCTGATGAAGGCTTCATA
TTGAATTTAAGAGAGCATTGGCGTATAAAATGTCCTGAAGAGGCAAATGATATAGTCCCT
GAGATTTTGAATGGACATAACCTGATCGACCTATTCGATCCTGAAATTGAGGAGAAGCTG

consensusID : consensus_9963#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 440
fasta sequence

                              [GACCTATTCGATCCTGAAATTGAGGAGAAGCTGAATGCTTTAGAAGAACAAGAGACTGCTCTCGATAATGCTGGATTTTACGATGAATCTGAACTACTGAAGAAGGAAAATGACCCAGAAATGAAAAAAATCAAAGAAACCGCAGCAAAGATAAGAGAGGCACGAGCATTGCGTGTTTTGGAATCACGAGCTCGTAAGCAAGTACGTAGACCTCAAGTACCTCGAAGTGCTCGTTCAGTTAGTGTACATAAAATACATAAAGATCTTGGTGAGCTTGGTTTGGAGGTGGATATGCATGAACAGGGCGAACGTGGTCGGTCACTAAAGAGAGCTGCTAGAGCACGGAATTCAACACCAAATCTACACCGTGAAGCTTCAATTGCACGTGCATCTGTATCGCGATCTAGATCTGGTTTACGTGATGAAAAAATGCATGACAC]

[+] EMBL CD116032             [GACCTATTCGATCCTGAAATTGAGGAGAAGCTGAATGCTTTAGAAGAACAAGAGACTGCTCTCGATAATGCTGGATTTTACGATGAATCTGAACTACTGAAGAAGGAAAATGACCCAGAAATGAAAAAAATCAAAGAAACCGCAGCAAAGATAAGAGAGGCACGAGCATTGCGTGTTTTGGAATCACGAGCTCGTAAGCAAGTACGTAGACCTCAAGTACCTCGAAGTGCTCGTTCAGTTAGTGTACATAAAATACATAAAGATCTTGGTGAGCTTGGTTTGGAGGTGGATATGCATGAACAGGGCGAACGTGGTCGGTCACTAAAGAGAGCTGCTAGAGCACGGAATTCAACACCAAATCTACACCGTGAAGCTTCAATTGCACGTGCATCTGTATCGCGATCTAGATCTGGTTTACGTGATGAAAAAATGCATGACAC]
[+] EMBL CD116026             [GACCTATTCGATCCTGAAATTGAGGAGAAGCTGAATGCTTTAGAAGAACAAGAGACTGCTCTCGAAAATGCTGGATTTTACGATGAATCTGAACTACTGAAGAAGGAAAATGACCCAGAAATGAAAAAAATCAAAGAAACCGCAGCAAAGATAAGAGAGGCACGAGCATTGCGTGTTTTGGAATCACGAGCTCGTAAGCAAGTACGTAGACCTCAAGTACCTCGAAGTGCTCGTTCAGTTAGTGTACATAAAATACATAAAGATCTTGGTGAGCTTGGTTTGGAGGTGGATATGCATGAACAGGGCGAACGTGGTCGGTCACTAAAGAGAGCTGCTAGAGCACGGAATTCAACACCAAATCTACACCGTGAAGCTTCAATTGCACGTGCATCTGTATCGCGATCTAGATCTGGTTTACGTGATGAAAAAATGCATGACAC]




>consensus_9963#1
GACCTATTCGATCCTGAAATTGAGGAGAAGCTGAATGCTTTAGAAGAACAAGAGACTGCT
CTCGATAATGCTGGATTTTACGATGAATCTGAACTACTGAAGAAGGAAAATGACCCAGAA
ATGAAAAAAATCAAAGAAACCGCAGCAAAGATAAGAGAGGCACGAGCATTGCGTGTTTTG
GAATCACGAGCTCGTAAGCAAGTACGTAGACCTCAAGTACCTCGAAGTGCTCGTTCAGTT
AGTGTACATAAAATACATAAAGATCTTGGTGAGCTTGGTTTGGAGGTGGATATGCATGAA
CAGGGCGAACGTGGTCGGTCACTAAAGAGAGCTGCTAGAGCACGGAATTCAACACCAAAT
CTACACCGTGAAGCTTCAATTGCACGTGCATCTGTATCGCGATCTAGATCTGGTTTACGT
GATGAAAAAATGCATGACAC

consensusID : consensus_9963#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 270
fasta sequence

                              [ACCTCCAAACCAAGCTCACCATGATCTTTATGTATTTTATGTACACTAACTGAACGAGCACTTCGAGGTACTTGAGGTCTACGTACTTGCTTACGAGCTCGTGATTCCAAAACACGCAATGCTCTCTTTAGTGACCGACCACGTTCGCCCTGTTCATGCATATCCACCTCCAAACCAAGCTCACCAAGATCTTTATGTATTTTATGTACACTAACTGAACGAGCACTTCTAGGTACTTGAGGTCTACGTACTTGCTTACGAGCTCGTGAT]

[+] EMBL CD196052             [ACCTCCAAACCAAGCTCACCATGATCTTTATGTATTTTATGTACACTAACTGAACGAGCACTTCGAGGTACTTGAGGTCTACGTACTTGCTTACGAGCTCGTGATTCCAAAACACGCAATGCTCTCTTTAGTGACCGACCACGTTCGCCCTGTTCATGCATATCCACCTCCAAACCAAGCTCACCAAGATCTTTATGTATTTTATGTACACTAACTGAACGAGCACTTCTAGGTACTTGAGGTCTACGTACTTGCTTACGAGCTCGTGAT]




>consensus_9963#2
ACCTCCAAACCAAGCTCACCATGATCTTTATGTATTTTATGTACACTAACTGAACGAGCA
CTTCGAGGTACTTGAGGTCTACGTACTTGCTTACGAGCTCGTGATTCCAAAACACGCAAT
GCTCTCTTTAGTGACCGACCACGTTCGCCCTGTTCATGCATATCCACCTCCAAACCAAGC
TCACCAAGATCTTTATGTATTTTATGTACACTAACTGAACGAGCACTTCTAGGTACTTGA
GGTCTACGTACTTGCTTACGAGCTCGTGAT

consensusID : consensus_9963#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 169
fasta sequence

                              [GTTTTATTCATTAAATTAAAAACAATTCAAAGAATCGTAAAAATCTAAATATCTTCCAATTCACCCTTTCCAGGTTGATATTAAACCATTTGAAGAACTATCTGAAGAAGATAAACAATCAATTAATAGTATTGTCCAGTGGCATACTGATAAACAGGTCAGAGATCCA]

[+] EMBL AI014207             [GTTTTATTCATTAAATTAAAAACAATTCAAAGAATCGTAAAAATCTAAATATCTTCCAATTCACCCTTTCCAGGTTGATATTAAACCATTTGAAGAACTATCTGAAGAAGATAAACAATCAATTAATAGTATTGTCCAGTGGCATACTGATAAACAGGTCAGAGATCCA]




>consensus_9963#3
GTTTTATTCATTAAATTAAAAACAATTCAAAGAATCGTAAAAATCTAAATATCTTCCAAT
TCACCCTTTCCAGGTTGATATTAAACCATTTGAAGAACTATCTGAAGAAGATAAACAATC
AATTAATAGTATTGTCCAGTGGCATACTGATAAACAGGTCAGAGATCCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9963#0      CGGTACCCAAACGTCCAACCGTTTCCATTTACAACTAAATCTTTATTTGTCGGACACACA 60
consensus_9963#3      ------------------------------------------------------------
consensus_9963#2      ------------------------------------------------------------
consensus_9963#1      ------------------------------------------------------------
                                                                                  

consensus_9963#0      GATTATAAAAATTTACGATGGCAAGTAATTGATACACCTGGTGTATTAAATAGACCTTTG 120
consensus_9963#3      ------------------------------------------------------------
consensus_9963#2      ------------------------------------------------------------
consensus_9963#1      ----------------------------------------------------GACCTATT 8
                                                                                  

consensus_9963#0      GACGAACATAACACAATCGAAATGCTATCCATTACAGCACTTGCACAT--CTACAAGCTG 178
consensus_9963#3      ------------------------------------------------------------
consensus_9963#2      ---------------ACCTCCAAACCAAGCTCACCATGATCTTTATGT--ATTTTATGTA 43
consensus_9963#1      CGATCCTGAAATTGAGGAGAAGCTGAATGCTTTAGAAGAACAAGAGACTGCTCTCGATAA 68
                                                                                  

consensus_9963#0      CTGTAATATATATCATGGATTTGTCTGAACAATGTGGATATACTATACAACAGCAATTAA 238
consensus_9963#3      ---------------------------------------GTTTTATTCATTAA-ATTAAA 20
consensus_9963#2      CACTAACTGAACGAGCACTTCGAGGTACTTGAGGTCTACGTACTTGCTTACGA----GCT 99
consensus_9963#1      TGCTGGATTTTACGATGAATCTGAACTACTGAAGAAGGAAAATGACCCAGAAATGAAAAA 128
                                                                                  

consensus_9963#0      CGTTATTCCAAAACTTGAAACCTCTTTTCCGTAACAAACCTCTTGTAATAGCCGCTAACA 298
consensus_9963#3      AACAATTCAAAGAATCGTAAAAATCT---------AAATATCTTCCAATTCACCCTTTCC 71
consensus_9963#2      CGTGATTCCAAAACACGCAATGCTCT----------CTTTAGTGACCGACCACGTTCGCC 149
consensus_9963#1      AATCAAAGAAACCGCAGCAAAGATAAGAGAGGCACGAGCATTGCGTGTTTTGGAATCAC- 187
                          *    **     * **                                   *  * 

consensus_9963#0      AAGTTGATATTAAACCATTTGAAGAACTATCTGAAGAAGATAAACAATCAATTAATA-GT 357
consensus_9963#3      AGGTTGATATTAAACCATTTGAAGAACTATCTGAAGAAGATAAACAATCAATTAATA-GT 130
consensus_9963#2      CTGTTCATGCATATCCACCTCCAAACCAAGCTCACCAAGATCTTTATGTATTTTATGTAC 209
consensus_9963#1      GAGCTCGTAAGCAAGTACGTAGACCTCAAGTACCTCGAAGTGCTCGTTCAGTTAGTGTAC 247
                        * *  *    *   *  *  *   * *        *  *        * **  *    

consensus_9963#0      ATTG--TCCAGTGGCATACTGATAAAC--AGGTCAGAGATCCAGATCGACCAATCTTTGT 413
consensus_9963#3      ATTG--TCCAGTGGCATACTGATAAAC--AGGTCAGAGATCCA----------------- 169
consensus_9963#2      ACTA--ACTGAACGAGCACTTCTAGGT--ACTTGAGGTCTACGTACTTGCTTACGAGCTC 265
consensus_9963#1      ATAAAATACATAAAGATCTTGGTGAGCTTGGTTTGGAGGTGGATATGCATGAACAGGGCG 307
                      *                  *  *         *  *   *                    

consensus_9963#0      TGAAATGTCCACTGTTACTGAAGTTGGTTTAGTGACTGTTCGTTCAGTTGCATGTGACGA 473
consensus_9963#3      ------------------------------------------------------------
consensus_9963#2      GTGAT------------------------------------------------------- 270
consensus_9963#1      AACGTGGTCGGTCACTAAAGAGAGCTGCTAGAGCACGGA--ATTCAACACCAAATCTACA 365
                                                                                  

consensus_9963#0      CTTGTTAGCTCAACGTGTACAAGCGAAAATTCGAGCTGCTACTCTGCCAGGCGGTAATGT 533
consensus_9963#3      ------------------------------------------------------------
consensus_9963#2      ------------------------------------------------------------
consensus_9963#1      CCGTGAAGCTTCAATTGCACGTGCATCTGTATCGCGATCTAGATCTGGTTTACGTGATGA 425
                                                                                  

consensus_9963#0      TGATATTTCTAATCGGTTGTATATAGCTAAACCGAAACCAGACGAAAATAAGACAGATGC 593
consensus_9963#3      ------------------------------------------------------------
consensus_9963#2      ------------------------------------------------------------
consensus_9963#1      AAAAATGCATGACAC--------------------------------------------- 440
                                                                                  

consensus_9963#0      ACCATCTCGTCCACCAATAATTCCCGACGGTGTTCTAGATAAACAAAAGAAACGTATACT 653
consensus_9963#3      ------------------------------------------------------------
consensus_9963#2      ------------------------------------------------------------
consensus_9963#1      ------------------------------------------------------------
                                                                                  

consensus_9963#0      TAAACGTCTTCGTATTGCTAATTCACTACAACCTTACTCGCAACTTGAAGACGAAGATGA 713
consensus_9963#3      ------------------------------------------------------------
consensus_9963#2      ------------------------------------------------------------
consensus_9963#1      ------------------------------------------------------------
                                                                                  

consensus_9963#0      CAACCCATCGAAACGTCGAACAATGCGTGATCGTGAACCAGATGCTGATCCTGATGAAGG 773
consensus_9963#3      ------------------------------------------------------------
consensus_9963#2      ------------------------------------------------------------
consensus_9963#1      ------------------------------------------------------------
                                                                                  

consensus_9963#0      CTTCATATTGAATTTAAGAGAGCATTGGCGTATAAAATGTCCTGAAGAGGCAAATGATAT 833
consensus_9963#3      ------------------------------------------------------------
consensus_9963#2      ------------------------------------------------------------
consensus_9963#1      ------------------------------------------------------------
                                                                                  

consensus_9963#0      AGTCCCTGAGATTTTGAATGGACATAACCTGATCGACCTATTCGATCCTGAAATTGAGGA 893
consensus_9963#3      ------------------------------------------------------------
consensus_9963#2      ------------------------------------------------------------
consensus_9963#1      ------------------------------------------------------------
                                                                                  

consensus_9963#0      GAAGCTG 900
consensus_9963#3      -------
consensus_9963#2      -------
consensus_9963#1      -------