cluster # 9966

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Schistosoma mansoni
cluster # 9966 cluster # 9966 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9966#0 length = 1096 sequences # 9

consensus_9966#1 length = 685 sequences # 2
consensus_9966#2 length = 233 sequences # 1

consensusID : consensus_9966#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1096
fasta sequence

                              [TAAATCATTTATTCAGTGATAAGCTTAGGGAATCGAAGTGAATTCTTTGTTTTGTTTACATGTTTAGGAAAGAATGACAACTTTTCTTTTACAATATTATAGGCTCTGGCTAATGATCTCCGGACGCTTCTTCAACCGAAATGTGAAGCTGGACTGTTTCTTTGTCAAGCAGATGAAGTAACACGTTGTATAAAAATTGAAGGGTTATTCCAAGAAGAGGTGGCTAAATTTCTTCTCAGTAAGGGGTTNTGAGAGTTGTATAAAAGTAATCATGTATATACTAAATAAACAACATTCTCGCTAACAGTTTTATTCAATAACAGCTTCATCCCACGGTCCATGAATAGTCCTTTTAATTTTCTGCATTCTTAATAAGTAACACGGTCCAGCAAAATTAATACACAGAGTCGATGTTATGAGTACGCAAAGAAAGATGCATCTATATTCAAATGATACTTCATTGTAAACTATCGGCCAAGCACTCAGAAGAGTTGTAGAACCAGATAATATGGTTAAGCATATTTGTGCTCGATCACCTCCGTTATTGCGAAACCTTCTTGTTAATGCTGGCCATAATGCTAATAAAGTGACGGCAGTGGAAAGCAATGCGAAAGTATGATAAGGGCCAGGTAGACGACTAGCCAAGCAGAGAGCAGCTAACAAAGCAGAACTCAGAGAAATAGTATTTGACCCAGGCTTTCGAGGATCCCCTTTCCAATGAGTCTTATAATCAAAACATGTCCAATACACAAGAAGAAAAAAGGTACACATGGCGTATATAGAGTCCGTGCTTACGCTCGATAGGAGAGAATGCAGAATAGGAGCAAGCAGAAAGCAAAATGTAAAAAATACCACGCCCGACTTGATTTCAGGTATGACTTTATGAAATTGTCTTTCATTTCCCTCTTTCATTGACCAAAACATGGCATACCCAGTAGTTATTAAGAAGAAAAGGTAAACATTGAGATGCTGTGGAGAAATCCAACCGAATAGTAGGTAAAAATAGATAATTACAAGCAAAGACAAACAACAGAGTTGTTGATAAATGCTGCCAGCAGCGATTATAACATTACGTGCTCGAAGTTTGGGTAGAAAC]

[+] EMBL CD199797             [TAAATCATTTATTCAGTGATAAGCTTAGGGAATCGAAGTGAATTCTTTGTTTTGGTTACATGTTTAAGAAAGAATGACAACTTTTCTTTTACAATATTATAGGCTCTGGCTAATGATCTCCGGACGCTTCTTCAACCGAAATGTGAAGCTGGACTGTTTCTTTGTCAAGCAGATGAAGTAACACGTTGTATAAAAATTGAAGGGTTATTCCAAGAAGAGGTGGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD199734             [ AAATCATTTATTCAGTGATAAGCTTAGGGAATCGAAGTGAATTCTTTGTTTTGTTTACATGTTTAGGAAAGAATGACAACTTTTCTTTTACAATATTATAGGCTCTGGCTAATGATCTCCGGACGCTTCTTCAACCGAAATGTGAAGCTGGACTGTTTCTTTGTCAAGCAGATGAAGTAACACGTTGTATACAAATTGAAGGGTTATTCCAAGAAGAGGTGGCTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD199656             [ AAATCATTTATTCAGTGATAAGCTTAGGGAATCGAAGTGAATTCTTTGTTTTGTTTACATGTTTAGGAAAGAATGACAACTTTTCTTTTACAATATTATAGGCTCTGGCTAATGATCTCCGGACGCTTCTTCAACCGAAATGTGAAGCTGGACTGTTTCTTTGTCAAGCAGATGAAGTAACACGTTGTATAAAAATTGAAGGGTTATTCCAAGAAGAGGTGGCTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD199717             [ AAATCATTTATTCAGTGATAAGCTTAGGGAATCGAAGTGAATTCTTTGTTTTGTTTACATGTTTAGGAAAGAATGACAACTTTTCTTTTACAATATTATAGGCTCTGGCTAATGATCTCCGGACGCTTCTTCAACCGAAATGTGAAGCTGGACTGTTTCTTTGTCAAGCAGATGAAGTAACACGTTGTATAAAAATTGAAGGGTTATTCCAAGAAGAGGTGGCTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD199652             [ AAATCATTTATTCAGTGATAAGCTTAGGGAATCGAAGTGAATTCTTTGTCTTGTTTACATGTTTAGGAAAGAATGACAACTTTTCTTTTACAATATTATAGGCTCTGGCTAATGATCTCCGGACGCTTCTTCAACCGAAATGTGAAGCTGGACTGTTTCTTTGTCAAGCAGATGAAGTAACACGTTGTATAAAAATTGAAGGGTTATTCCAAGAAGAGGTGGCTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD062610             [                                            CTTTGTTTTGTTTACATGTTTAGGAAAGAATGACAACTTTTCTTTTACAATATTTTAGGCTCTGGCTAATGATCTCCGGACGCTTCTTCAACCGAAATGTGAAGCTGGACTGTTTCTTTGTCAAGCAGATGAACCCCCCCGTTGTATAAAAATTGAAGGGTTATTCCAAGAAGAGGTGGCTAAATTTCTTCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD190415             [                                                                                                                                              GTGAAGCTGGACTG TTCCTTGTCAAGCAGATGAAGTACNACGTTGTATAAANATTGAAGGGTTATTCCAAGAAGAGGTGGCTAAATTTCTTCTCAGTAAGGGGTTNTGAGAGTTGTATAAAAGTAATCATGTATATACTAAATAAACAACATTCTCGCTAACAGTTTTATTCAATAACAGCTTCATCCCACGGTCCATGAATAGTCCTTTTAATTTTCTGCATTCTTAATAAGTAACACGGTCCAGCAAAATTAATACACAGAGTCGATGTTATGAGTACGCAAAGAAAGATGCATCTATATTCAAATGATACTTCATTGTAAACTATCGGCCAAGCACTCAGAAGAGTTGTAGAACCAGATAATATGGTTAAGCATATTTGTGCTCGATCACCTCCGTTATTGCGAAACCTTCTTGTTAATGCTGGCCATAATGCTAATAAAGTGACGGCAGTGGAAAGCAATGCGAAAGTATGATAAGGGCCAGGTAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD191198             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GAAACCTTCTTGTTAATGCTGGCCATAATGCTAATAAAGTGACGGCAGTGGAAAGCAATGCGAAAGTATGATAAGGGCCAGGTAGACGACTAGCCAAGCAGAGAGCAGCTAACAAAGCAGAACTCAGAGAAATAGTATTTGACCCAGGCTTTCGAGGATCCCC                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD201992             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TATGATAAGGGCCAGGTAGACGACTAGCCAAGCAGAGAGCAGCTAACAAAGCAGAACTCAGAGAAATAGTATTTGACCCAGGCTTTCGAGGATGCCCTTTCCAATGAGTCTTATAATCAAAACATGTCCAATACACAAGAAGAAAAAAGGTACACATGGCGTATATAGAGTCCGTGCTTACGCTCGATAGGAGAGAATGCAGAATAGGAGCAAGCAGAAAGCAAAATGTAAAAAATACCACGCCCGACTTGATTTCAGGTATGACTTTATGAAATTGTCTTTCATTTCCCTCTTTCATTGACCAAAACATGGCATACCCAGTAGTTATTAAGAAGAAAAGGTAAACATTGAGATGCTGTGGAGAAATCCAACCGAATAGTAGGTAAAAATAGATAATTACAAGCAAAGACAAACAACAGAGTTGTTGATAAATGCTGCCAGCAGCGATTATAACATTACGTGCTCGAAGTTTGGGTAGAAAC]




>consensus_9966#0
TAAATCATTTATTCAGTGATAAGCTTAGGGAATCGAAGTGAATTCTTTGTTTTGTTTACA
TGTTTAGGAAAGAATGACAACTTTTCTTTTACAATATTATAGGCTCTGGCTAATGATCTC
CGGACGCTTCTTCAACCGAAATGTGAAGCTGGACTGTTTCTTTGTCAAGCAGATGAAGTA
ACACGTTGTATAAAAATTGAAGGGTTATTCCAAGAAGAGGTGGCTAAATTTCTTCTCAGT
AAGGGGTTNTGAGAGTTGTATAAAAGTAATCATGTATATACTAAATAAACAACATTCTCG
CTAACAGTTTTATTCAATAACAGCTTCATCCCACGGTCCATGAATAGTCCTTTTAATTTT
CTGCATTCTTAATAAGTAACACGGTCCAGCAAAATTAATACACAGAGTCGATGTTATGAG
TACGCAAAGAAAGATGCATCTATATTCAAATGATACTTCATTGTAAACTATCGGCCAAGC
ACTCAGAAGAGTTGTAGAACCAGATAATATGGTTAAGCATATTTGTGCTCGATCACCTCC
GTTATTGCGAAACCTTCTTGTTAATGCTGGCCATAATGCTAATAAAGTGACGGCAGTGGA
AAGCAATGCGAAAGTATGATAAGGGCCAGGTAGACGACTAGCCAAGCAGAGAGCAGCTAA
CAAAGCAGAACTCAGAGAAATAGTATTTGACCCAGGCTTTCGAGGATCCCCTTTCCAATG
AGTCTTATAATCAAAACATGTCCAATACACAAGAAGAAAAAAGGTACACATGGCGTATAT
AGAGTCCGTGCTTACGCTCGATAGGAGAGAATGCAGAATAGGAGCAAGCAGAAAGCAAAA
TGTAAAAAATACCACGCCCGACTTGATTTCAGGTATGACTTTATGAAATTGTCTTTCATT
TCCCTCTTTCATTGACCAAAACATGGCATACCCAGTAGTTATTAAGAAGAAAAGGTAAAC
ATTGAGATGCTGTGGAGAAATCCAACCGAATAGTAGGTAAAAATAGATAATTACAAGCAA
AGACAAACAACAGAGTTGTTGATAAATGCTGCCAGCAGCGATTATAACATTACGTGCTCG
AAGTTTGGGTAGAAAC

consensusID : consensus_9966#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 685
fasta sequence

                              [TTCTTCTCAGTAAGGGGTTTTGAGAGTTGTATAAAAGTAATCATGTATATACTAAATAAACAATATTCTCGCTAACAGTTTTATTCAATAACAGCTTCATCCCACGGTCCATGAATAGTCCTGTTACAAAGAAAATCGAAAATTTATGAGGAATTGTGATTATGCAATATGAAATTAAGTTTGTTTGTCAGGATTTATGTCGTTTATTGTGCATGTGTCATTGCAGTTTTGAATGAAGCACTAATTTTACACAGTAGCTTGTTTATATAAACGAACCGACCCTAAACATACACAAGCATCATTGTGAAAACCGATGGTACCAGAGTCATGTCGTACACAACAAAGATCTCAAACGTCTATAATAACGTGGTACTTTTTGACCAAAGACTACTAAGTGATTCTATCCAATCGATGTCAAATGATAGATTGTAACTGGTGCAGGATCATATGAC-AAAAAAAACTCATGCTTGTACTTGGAAAATCTCTGAAAGATAAAAATACTGAATTTTGTAACAGCTTAACAAGTTATGAGTATTCAGAATTTGTAAGAAAAAAAAGTTATCATGATAAATGCGATTTGGAATCCAACTAGCCGATTGACTCACGAACCTTTTTATTTTCTGCATTCTTAATAAGTAACACGGTCCAGCAAAATTATACACAGAGTCGATGTTATGAGTACGCA]

[+] EMBL BF936744             [TTCTTCTCAGTAAGGGGTTTTGAGAGTTGTATAAAAGTAATCATGTATATACTAAATAAACAATATTCTCGCTAACAGTTTTATTCAATAACAGCTTCATCCCACGGTCCATGAATAGTCCTGTTACAAAGAAAATCGAAAATTTATGAGGAATTGTGATTATGCAATATGAAATTAAGTTTGTTTGTCAGGATTTATGTCGTTTATTGTGCATGTGTCATTGCAGTTTTGAATGAAGCACTAATTTTACACAGTAGCTTGTTTATATAAACGAACCGACCCTAAACATACACAAGCATCATTGTGAAAACCGATGGTACCAGAGTCATGTCGTACACAACAAAGATCTCAAACGTCTATAATAACGTGGTACTTTTTGACCAAAGACTACTAAGTGATTCTATCCAATCGATGTCAAATGATAGATTGTAACTGGTGCAGGATCATATGAC AAAAAAAACTCATGCTTGTACTTGGAAAATCTCTGAAAGATAAAAATACTGAATTTTGTAACAGCTTAACAAGTTATGAGTATTCAGAATTTGTAAGAAAAAAAAGTTATCATGATAAATGCGATTTGGAATCCAACTAGCCGATTGACTCACGAACCTTTTTATTTTCTGCATTCTTAATAAGTAACACGGTCCAGCAAAATTATACACAGAGTCGATGTTATGAGTACGCA]
[-] EMBL CD126627             [                                                                                                                                                                                 AGTTTGTTTGTCAGGATTTATGTCGTTTATTGTGCATGTGTCATTGCAGTTTTGAATGAAGCACTAATTTTACACAGTAGCTTGTTTATATAAACGAACCGACCCTAAACATACACAAGCATCATTGTGAAAACCGATGGTACCAGAGTCATGTCGTACACAACAAAGATCTCAAACGTCTATAATAACGTGGTACTTTTTGACCCAAGACTACTAAGTGATTCTATCCCATCGATGTCAAATGATAGATTGTAACTGGTGCAGGATCATATGACAAAAAAAAACTCATGCTTGTACTTGGGAAATCTCTGAAAGATCAAAATACTGAATTTTGTCACAGCTTCAC AGTTATGAGTATTCAG ATCTGTAAGAAAAAAAA                                                                                                                                ]




>consensus_9966#1
TTCTTCTCAGTAAGGGGTTTTGAGAGTTGTATAAAAGTAATCATGTATATACTAAATAAA
CAATATTCTCGCTAACAGTTTTATTCAATAACAGCTTCATCCCACGGTCCATGAATAGTC
CTGTTACAAAGAAAATCGAAAATTTATGAGGAATTGTGATTATGCAATATGAAATTAAGT
TTGTTTGTCAGGATTTATGTCGTTTATTGTGCATGTGTCATTGCAGTTTTGAATGAAGCA
CTAATTTTACACAGTAGCTTGTTTATATAAACGAACCGACCCTAAACATACACAAGCATC
ATTGTGAAAACCGATGGTACCAGAGTCATGTCGTACACAACAAAGATCTCAAACGTCTAT
AATAACGTGGTACTTTTTGACCAAAGACTACTAAGTGATTCTATCCAATCGATGTCAAAT
GATAGATTGTAACTGGTGCAGGATCATATGACAAAAAAAACTCATGCTTGTACTTGGAAA
ATCTCTGAAAGATAAAAATACTGAATTTTGTAACAGCTTAACAAGTTATGAGTATTCAGA
ATTTGTAAGAAAAAAAAGTTATCATGATAAATGCGATTTGGAATCCAACTAGCCGATTGA
CTCACGAACCTTTTTATTTTCTGCATTCTTAATAAGTAACACGGTCCAGCAAAATTATAC
ACAGAGTCGATGTTATGAGTACGCA

consensusID : consensus_9966#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 233
fasta sequence

                              [TAACAAAGCAGAACTCAGAGAAATAGTATTTGACCCAGGCTTTCGAGGATGCCCTTTCCAATGAGTCTTATAATCAAAACATGTCCAATACACAAGAAGAAAAAAAGTACACATGGCGTATATAGAGTCCGTGCTTACGCTCGATAGGAGAGAATGCAGAATAGGAGCAAGCAGTAAGCAAAATGTAAAAAATACCACGCCCGACTTGATTTCAGGTATGACAACAGAGTTGT]

[+] EMBL CD170063             [TAACAAAGCAGAACTCAGAGAAATAGTATTTGACCCAGGCTTTCGAGGATGCCCTTTCCAATGAGTCTTATAATCAAAACATGTCCAATACACAAGAAGAAAAAAAGTACACATGGCGTATATAGAGTCCGTGCTTACGCTCGATAGGAGAGAATGCAGAATAGGAGCAAGCAGTAAGCAAAATGTAAAAAATACCACGCCCGACTTGATTTCAGGTATGACAACAGAGTTGT]




>consensus_9966#2
TAACAAAGCAGAACTCAGAGAAATAGTATTTGACCCAGGCTTTCGAGGATGCCCTTTCCA
ATGAGTCTTATAATCAAAACATGTCCAATACACAAGAAGAAAAAAAGTACACATGGCGTA
TATAGAGTCCGTGCTTACGCTCGATAGGAGAGAATGCAGAATAGGAGCAAGCAGTAAGCA
AAATGTAAAAAATACCACGCCCGACTTGATTTCAGGTATGACAACAGAGTTGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9966#0      TAAATCATTTATTCAGTGATAAGCTTAGGGAATCGAAGTGAATTCTTTGTTTTGTTTACA 60
consensus_9966#2      ------------------------------------------------------------
consensus_9966#1      ------------------------------------------------------------
                                                                                  

consensus_9966#0      TGTTTAGGAAAGAATGACAACTTTTCTTTTACAATATTATAGGCTCTGGCTAATGATCTC 120
consensus_9966#2      ------------------------------------------------------------
consensus_9966#1      ------------------------------------------------------------
                                                                                  

consensus_9966#0      CGGACGCTTCTTCAACCGAAATGTGAAGCTGGACTGTTTCTTTGTCAAGCAGATGAAGTA 180
consensus_9966#2      ------------------------------------------------------------
consensus_9966#1      ------------------------------------------------------------
                                                                                  

consensus_9966#0      ACACGTTGTATAAAAATTGAAGGGTTATTCCAAGAAGAGGTGGCTAAATTTCTTCTCAGT 240
consensus_9966#2      ------------------------------------------------------------
consensus_9966#1      -------------------------------------------------TTCTTCTCAGT 11
                                                                                  

consensus_9966#0      AAGGGGTTNTGAGAGTTGTATAAAAGTAATCATGTATATACTAAATAAACAACATTCTCG 300
consensus_9966#2      ------------------------------------------------------------
consensus_9966#1      AAGGGGTTTTGAGAGTTGTATAAAAGTAATCATGTATATACTAAATAAACAATATTCTCG 71
                                                                                  

consensus_9966#0      CTAACAGTTTTATTCAATAACAGCTTCATCCCACGGTCCATGAATAGTCCTTTTAATTTT 360
consensus_9966#2      ------------------------------------------------------------
consensus_9966#1      CTAACAGTTTTATTCAATAACAGCTTCATCCCACGGTCCATGAATAGTCCTGTTA----C 127
                                                                                  

consensus_9966#0      CTGCATTCTTAATAAGTAACACGGTCCAGCAAAATTAATACACAGAGTCGATGTTATGAG 420
consensus_9966#2      ------------------------------------------------------------
consensus_9966#1      AAAGAAAATCGAAAATTTATGAGGAATTGTGATTATGCAATATGAAATTAAGTTT----G 183
                                                                                  

consensus_9966#0      TACGCAAAGAAAGATGCATCTATATTCAAATGATACTTCATTGTAAACTATCGGCCAAGC 480
consensus_9966#2      ------------------------------------------------------------
consensus_9966#1      TTTGTCAGGATTTATGTCGTTTATTGTGCATGTGTCATTGCAGTTTTGAATGAAGCACTA 243
                                                                                  

consensus_9966#0      ACTCAGAAGAGTTGTAGAACCAGATAATATGGTTAAGCATATTTGTGCTCGATCACCTCC 540
consensus_9966#2      ------------------------------------------------------------
consensus_9966#1      ATTTTACACAGTAGCTTGTTTATATAAACGAACCGACCCTAAACATACACAAGCATCATT 303
                                                                                  

consensus_9966#0      GTTATTGCGAAACCTTCTTGTTAATGCTGGCCATAATGCTAATAAAGTGACGGCAGTGGA 600
consensus_9966#2      ------------------------------------------------------------
consensus_9966#1      GTGAAAACCGATGGTACCAG--AGTCATGTCGTACACAACAAAGATCTCAAACGTCTATA 361
                                                                                  

consensus_9966#0      AAGCAATGCGAAAGTATGATAAGGGCCAGGTAGACGACTA-GCCAAGCAGAGAGCAGCTA 659
consensus_9966#2      ----------------------------------------------------------TA 2
consensus_9966#1      ATAACGTGGTACTTTTTGACCAAAGACTACTAAGTGATTCTATCCAATCGATGTCAAATG 421
                                                                                * 

consensus_9966#0      ACAAAGCAGAACTCAGAGAAATAGTATTTGACCCAGGCTTTCGAGGATCCCCTTTCCAAT 719
consensus_9966#2      ACAAAGCAGAACTCAGAGAAATAGTATTTGACCCAGGCTTTCGAGGATGCCCTTTCCAAT 62
consensus_9966#1      ATAGATTGTAACT-GGTGCAGGATCATATGACAAAAAAAACTCATGCTTGTACTTGGAAA 480
                      * * *    ****  * * *  *  ** ****  *        * * *     **  ** 

consensus_9966#0      GAGTCTTATAATCAAAACATGTCCAATACACAAGAAGAAAAAAGGTACACATGGCGTATA 779
consensus_9966#2      GAGTCTTATAATCAAAACATGTCCAATACACAAGAAGAAAAAAAGTACACATGGCGTATA 122
consensus_9966#1      ATCTCTGAAAGATAAAAATACTGAATTTTGTAACAGCTTAACAAGT---TATGA-GTATT 536
                         *** * *   ****    *  * *    ** *    ** * **    ***  **** 

consensus_9966#0      TAGAGTCCGTGCTTACGCTCGATAGGAGAGAATGCAGAATAGGAGCAAGCAGAAAGCAAA 839
consensus_9966#2      TAGAGTCCGTGCTTACGCTCGATAGGAGAGAATGCAGAATAGGAGCAAGCAGTAAGCAAA 182
consensus_9966#1      CAGAATTTGTAA--------GAAAAAAAAGTTATCATGATAAATGCGATTTGGAATCCAA 588
                       *** *  **          ** *  * **    **  ***   ** *   * ** * **

consensus_9966#0      ATGTAAAAAATAC-CACGCCCGACTTGATTTCAGGTATGACTTTATGAAATTGTCTTTCA 898
consensus_9966#2      ATGTAAAAAATAC-CACGCCCGACTTGATTTCAGGTATGAC--AACAGAGTTGT------ 233
consensus_9966#1      CTAGCCGATTGACTCACGAACCTTTTTATTTTCTGCATTCTTAATAAGTAACACGGTCCA 648
                       *     *   ** ****  *   ** ****   * **                      

consensus_9966#0      TTTCCCTCTTTCATTGA-CCAAAACATGGCATACCCAGTAGTTATTAAGAAGAAAAGGTA 957
consensus_9966#2      ------------------------------------------------------------
consensus_9966#1      GCAAAATTATACACAGAGTCGATGTTATGAGTACGCA----------------------- 685
                                                                                  

consensus_9966#0      AACATTGAGATGCTGTGGAGAAATCCAACCGAATAGTAGGTAAAAATAGATAATTACAAG 1017
consensus_9966#2      ------------------------------------------------------------
consensus_9966#1      ------------------------------------------------------------
                                                                                  

consensus_9966#0      CAAAGACAAACAACAGAGTTGTTGATAAATGCTGCCAGCAGCGATTATAACATTACGTGC 1077
consensus_9966#2      ------------------------------------------------------------
consensus_9966#1      ------------------------------------------------------------
                                                                                  

consensus_9966#0      TCGAAGTTTGGGTAGAAAC 1096
consensus_9966#2      -------------------
consensus_9966#1      -------------------