cluster # 9979

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Schistosoma mansoni
cluster # 9979 cluster # 9979 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9979#0 length = 1258 sequences # 6

consensus_9979#1 length = 944 sequences # 2
consensus_9979#2 length = 576 sequences # 4

consensusID : consensus_9979#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1258
fasta sequence

                              [AGCTCTGGACAGCCTCCAGACCGGAAGTTTACCGAATCCATGCTCAACTTTCCCAAGAACGCTTTCCCATTAAGTTGACTGACGCTAATGAAAAGTTCCCCAAGACTGTAATGAAGTCATTTCACGAATTGTCAAGGGAAGAACAAGCTGCAGTGGAGAAAAAGCGTATCACGGATTATTGCCGTCGAGCTTATAAACGTATTCACTTAACTAGAACTGAAGAACGAATTGCTATGGTCTGTCAATTAAATAATGGTTCAAACATATGTAGAAATAACGACCTTGTCAGTGCTTACCTTGCGGAAAAATCAGTCGGTTCACACATAGAGTTCGATGTTGCCAACAACAACAAAAATTCGAATCCGAACTTAGTTCTACCCCTTTTACCTGCACATCAGGCTATTTATACTCTGAATTTCACTCCGCTTCTTGATTTCATTAAATCATTGTGTGAGGTTTTGAGTTTAGAGCCATCCGCGAAGTTACACATTGAAAGCATTAGACATGATTTACTTCGTTT-ATANATGTTGGAGAATTTCAACCTGAGGCCATTTGGATTTCCCCCCATATGATAAGGGATTGTCCGTTGAACCAAGATCCAAATAAATATACTTTTGAAACAACTGCAATTCGTTCTCTACTAATTTATCTCCCAGAGGTTGCTTGCCCAACGTGTAATTTTACACGGGACATAGATGTTTGTCGTGATATACATGTCGTTTGGATAATGGCATCTATGGATTCAATGCATGCTGAAACTAGACAATCAGGTTGTTGGGCTTGGGTATGTCCACATTGTCGTACAGTTTATCCACGTGATAAGCTGGAAGAAGCTCTTGTTCAACAGCTTGAACAATTCTCACTTCAACATTGTTTACAGGATCTCCAGTGTCCTAAATGTACTGT-AGGTGGTGGGATACAGGAGTTGCTGATTGCAAATGG-TGGGTCAGTTGCTCAATGTGCTGATTGTTCTACGAAGCTGACACTAACTGTTCCAACTGGGCATGCAGTTTATCGTCGTTTAGATGTTTATCGTCATATCGGTGTACATTTCGGTTTTGAATACTTAGAACAAATCGCTTATTGGCTTATCCAGGGCTTACAACAATAGACAGATTCTTAATGTTTTTCATATGAACCGATATATAATGCATTTTATAACACTATTTTTGCTAAAAGAATATTTTGTATTGGTTTCCACTTTTATATTGAGGATTACTTGAAAATTCAATATTTTGTCTATCTTTTTC-AATAAAAT]

[+] EMBL CD116023             [AGCTCTGGACAGCCTCCAGACCGGAAGTTTACCGAATCCATGCTCAACTTTCCCAAGAACGCTTTCCCATTAAGTTGACTGACGCTAATGAAAAGTTCCCCAAGACTGTAATGAAGTCATTTCACGAATTGTCAAGGGAAGAACAAGCTGCAGTGGAGAAAAAGCGTATCACGGATTATTGCCGTCGAGCTTATAAACGTATTCACTTAACTAGAACTGAAGAACGAATTGCTATGGTCTGTCAATTAAATAATGGTTCAAACATATGTAGAAATAACGACCTTGTCAGTGCTTACCTTGCGGAAAAATCAGTCGGTTCACACATAGAGTTCGATGTTGCCAACAACAACAAAAATTCGAATCCGAACTTAGTTCTACCCCTTTTACCTGCACATCAGGCTATTTATACTCTGAATTTCACTCCGCTTCTTGATTTCATTAAATCATTGTGTGAGGTTTTGAGTTTAGAGCCATCCGCGAAGTTACACATTGAAAGCATTAGACATGATTTACTTCGTTT ATANATGTTGGAGAATTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD080028             [                                                                                                                                                                                                                                                                                                                                                                                              TTTACCTGCACATCAGGCTATTTATACTCTGAATTTCACTCCGCTTCTTGATTTCATTAAATCATTGTGTGAGGTTTTGAGTTTAGAGCCATCCGCGAAGTTACACATTGAAAGCATTAGACATGATTTACTTCGTTTAATAAATGTTGGAGAATTTTCACCTGAGGCCATTTGGATTTCCCCCCATATGATAAGGGATTGTCCGTTGAACCAAGATCCAAATAAATATACTTTTGAAACAACTGCAATTCGTTCTCTACTAATTTATCTCCCAGAGGTTGCTTGCCCAACGTGTAATTTTACACGGGACATAGATGTTTGTCGTGATATACATGTCGTTTGGATAATGGCATCTATGGATTCAATGCATGCTGAAACTAGACAATCAGGTTGTTGGGCTTGGGTATGTCCACATTGTCGTACAGTTTATCCACGTGATAAGCTGGAAGAAGCTCTTGTTCAACAGCTTGAACAATTCTCACTTCAACATTGTTTACAGGATCTCCAGTGTCCTAAATGTACTGTNAGGTGGTGGGATACAGGAGTTGCTGATTGCAAATGGNGGGGTCAGTTGCTCAATGTGCTGATTGTTCTACGAAGCTGACACTAACTGTTCCAACTGGGCATGCAGTTTATCGTCGNTTAAATGTTTATCGTCA                                                                                                                                                                                                                             ]
[-] EMBL CD059773             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGATAAGGGATTGTCCGTTGAACCAAGATCCAAATAAATATACTTTTGAAACAACTGCAATTCGTTCTCTACTAATTTATCTCCCAGAGGTTGCTTGCCCAACGTGTAATTTTACACGGGACATAGATGTTTGTCGTGATATACATGTCGTTTGGATAATGGCATCTATGGATTCAATGCATGCTGAAACTAGACAATCAGGTTGTTGGGCTTGGGTATGTCCTCATTGTCGTACAGTTTATCCACGTGATAAGCTGGAAGAAGCTCTTGTTCAACAGCTTGAACAATTCTCACTTCAACATTGTTTACAGGATCTCCAGTGTCCTAAATGTACTGT AGGTGGTGGGATACAGGAGTTGCTGATTGCAAATGG TGGGTCAGTTGCTCAATGTGCTGATTGTTCTACGAAGCTGACACTAACTGTTCCAACTGGGCATGCAGTTTATCGTCGTTTAGGTGTTTATCGTCATATCGGTGTACATTTCGGTTTTGAATACTTAGAACAAATCGCTTA                                                                                                                                                                                ]
[+] EMBL CD082367             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AACAACTGCAATTCGTTCTCTACTAATATANCTCCCAGAGGTTGATCGCCCAACGTGTAATTTTACACGGGACATAGATGTTTGTCGTGATATACATGTCGTTTGGATAATGGCATCTATGGATTCAATGCATGCTGAAACTAGACAATCAGGTTGTTGGGCTTGGGTATGTCCACATTGTCGTACAGTTTATCCACGTGATAAGCTGGAAGAAGCTCTTGTTCAACAGCTTGAACAATTCTCACTTCAACATTGTTTACAGGATCTCCAGTGTCCTAAATGTACTGT AGGTGGTGGGATACAGGAGTTGCTGATTGCAAATGG TGGGTCAGTTGCTCAATGTGCTGATTGTTCTACGAAGCTGACACTAACTGTTCCAACTGGGCATGCAGTTTATCGTCGTTTAGATGTTTATCGTCATATCGGTGTACATTTCGGTTTTGAATACTTAGAACAAATCGCTTATTGGCTTATCCAGGGCTTACAACAATAGACAGATTCTTAATGTTTTTCATATGAACCGATATATAATGCATTTTATAACACTATTTTTGCTAAAAGAATATTTTGTATTGGTTTCCACTTTTATATTGAGGATTACTTGAAAATTCAATATTTTGTCTATCTTTTTC AATAAAA ]
[-] EMBL CD075970             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GATGTTTGTCGTGATATACATGTCGTTTGGATAATGGCATCTATGGATTCAATGCATGCTGAAACTAGACAATCAGGTTGTTGGGCTTGGGTATGTCCACATTGTCGTACAGTTTATCCACGTGATAAGCTGGAAGAAGCTCTTGTTCAACAGCTTGAACAATTCTCACTTCAACATTGTTTACAGGATCTCCAGTGTCCTAAATGTACTGT AGGTGGTGGGATACAGGAGTTGCTGATTGCAAATGG TGGGTCAGTTGCTCAATGTGCTGATTGTTCTACGAAGCTGACACTAACTGTTCCAACTGGGCATGCAGTTTATCGTCGTTTAGATGTTTATCGTCATATCGGTGTACATTTCGGTTTTGAATACTTAGAACAAATCGCTTATTGGCTTATCCAGGGCTTACAACAATAGACAGATTCTTAATGTTTTTCATATGAACCGATATATAATGCATTTTATAACACTATTTTTGCTAAAAGAATATTTTGTATTGGTTTCCACTTTTATATTGAGGATTACTTGAAAATTCAATATTTTGTCTATCTTTTTCAAATAAAAT]
[+] EMBL CD059849             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCC ACTGGGCATGCAGTTTATCGTCGTTTAGATGTTTATCGTCATATCGGTGTACATTTCGGTTTTGAATACTTAAAACAAATCGCTT                                                                                                                                                                                 ]




>consensus_9979#0
AGCTCTGGACAGCCTCCAGACCGGAAGTTTACCGAATCCATGCTCAACTTTCCCAAGAAC
GCTTTCCCATTAAGTTGACTGACGCTAATGAAAAGTTCCCCAAGACTGTAATGAAGTCAT
TTCACGAATTGTCAAGGGAAGAACAAGCTGCAGTGGAGAAAAAGCGTATCACGGATTATT
GCCGTCGAGCTTATAAACGTATTCACTTAACTAGAACTGAAGAACGAATTGCTATGGTCT
GTCAATTAAATAATGGTTCAAACATATGTAGAAATAACGACCTTGTCAGTGCTTACCTTG
CGGAAAAATCAGTCGGTTCACACATAGAGTTCGATGTTGCCAACAACAACAAAAATTCGA
ATCCGAACTTAGTTCTACCCCTTTTACCTGCACATCAGGCTATTTATACTCTGAATTTCA
CTCCGCTTCTTGATTTCATTAAATCATTGTGTGAGGTTTTGAGTTTAGAGCCATCCGCGA
AGTTACACATTGAAAGCATTAGACATGATTTACTTCGTTTATANATGTTGGAGAATTTCA
ACCTGAGGCCATTTGGATTTCCCCCCATATGATAAGGGATTGTCCGTTGAACCAAGATCC
AAATAAATATACTTTTGAAACAACTGCAATTCGTTCTCTACTAATTTATCTCCCAGAGGT
TGCTTGCCCAACGTGTAATTTTACACGGGACATAGATGTTTGTCGTGATATACATGTCGT
TTGGATAATGGCATCTATGGATTCAATGCATGCTGAAACTAGACAATCAGGTTGTTGGGC
TTGGGTATGTCCACATTGTCGTACAGTTTATCCACGTGATAAGCTGGAAGAAGCTCTTGT
TCAACAGCTTGAACAATTCTCACTTCAACATTGTTTACAGGATCTCCAGTGTCCTAAATG
TACTGTAGGTGGTGGGATACAGGAGTTGCTGATTGCAAATGGTGGGTCAGTTGCTCAATG
TGCTGATTGTTCTACGAAGCTGACACTAACTGTTCCAACTGGGCATGCAGTTTATCGTCG
TTTAGATGTTTATCGTCATATCGGTGTACATTTCGGTTTTGAATACTTAGAACAAATCGC
TTATTGGCTTATCCAGGGCTTACAACAATAGACAGATTCTTAATGTTTTTCATATGAACC
GATATATAATGCATTTTATAACACTATTTTTGCTAAAAGAATATTTTGTATTGGTTTCCA
CTTTTATATTGAGGATTACTTGAAAATTCAATATTTTGTCTATCTTTTTCAATAAAAT

consensusID : consensus_9979#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 944
fasta sequence

                              [TTGATCCTGAACTTGATATGCATTGGCATTTAGCACGTTATTTACCTGAGACACGTGGTTTAAGAAGTAAATTTCAAAGTCTTCTAGCAGGATATCTTTTGGCTATTTACAATGCAGTTCGAAATGAACATCGACGTTTGATCGAATCTATTAAATGTTCTTTGTTTGCAATCTCTTATAAAAAGGGTGTGAGATGTCAACTTTCCGAATTCTTATGAAGGACACCCATTTTTCTAATCAACGATTGTTTGCCTTGGCGCTCACTTGGTGTTTCGTTAGTTTCCCTTTAAGAGTCATGATAAACAGTTCTATACTTTTTTTTAGAATGAACCACACGGATCTCTTGAATTCGATGTTGATGTGAATAAAGATCCTAACTGTGTACATGAAGCTGAAACAACAC-CATACAAGTCAGACGCTACTGTCTCTCCTGGAGTTAGGGAATATGAAGAACGTTTATTTAGAGATCAATTGGCCCCAGAGTTATACAATCTAATTATTCGCCTACAACGTAAAGCTGCTTGGATTGATCCAGAGTTAATGAGGAAAACTGACCCATCAATTGATAATAATAGGATCAACCAATTAAATAATGGTTCAAACATATGTAGAAATAACGACCTTGTCAGTGCTTACCTTGCGGAAAAATCAGTCGGTTCACACATAGAGTTCGATGTTGCCAACAACAACAAAAATTCGAATCCGAACTTAGTTCTACCCCTTTTACCTGCACATCAGGCTATTTATACTCTGAATTTCACTCCGCTTCTTGATTTCATTAAATCATTGTGTGAGGTTTTGAGTTTAGAGCCATCCGCGAAGTTACACATTGAAAGCATTAGACATGATTTACTTCGTTTAATAAATGTTGGAGAATTTTCACCTGAGGCCATTTGGATTTCCCCCCATATGANTAGGGATTGTCCGTTGAACCAAGATCCCAA]

[-] EMBL CD096977             [TTGATCCTGAACTTGATATGCATTGGCATTTAGCACGTTATTTACCTGAGACACGTGGTTTAAGAAGTAAATTTCAAAGTCTTCTAGCAGGATATCTTTTGGCTATTTACAATGCAGTTCGAAATGAACATCGACGTTTGATCGAATCTATTAAATGTTCTTTGTTTGCAATCTCTTATAAAAAGGGTGTGAGATGTCAACTTTCCGAATTCTTATGAAGGACACCCATTTTTCTAATCAACGATTGTTTGCCTTGGCGCTCACTTGGTGTTTCGTTAGTTTCCCTTTAAGAGTCATGATAAACAGTTCTATACTTTTTTTTAGAATGAACCACACGGATCTCTTGAATTCGATGTTGATGTGAATAAAGATCCTAACTGTGTACATGAAGCTGAAACAACAC CATACAAGTCAGACGCTACTGTCTCTCCTGGAGTTAGGGAATATGAAGAACGTTTATTTAGAGATCAATTGGCCCCAGAGTTATACAATCTAATTATTCGCCTACAACGTAAAGCTGCTTGGATTGATCCAGAGTTAATGAGGAAAACTGACCCATCAATTGATAATAATAGGATCAAC                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD116176             [                                                                                                                                                                                                                                                                                                                                                                                                            ACAACACTCATACAAGTCAGACGCTACTGTCTCTCCTGGAGTTAGGGAATATGAAGAACGTTTATTTAGAGATCAATTGGCCCCAGAGTTATACAATCTAATTATTCGCCTACAACGTAAAGCTGCTTGGATTGATCCAGAGTTAATGAGGAAAACTGACCCATCAATTGATAATAATAGGACCTGTCAATTAAATAATGGTTCAAACATATGTAGAAATAACGACCTTGTCAGTGCTTACCTTGCGGAAAAATCAGTCGGTTCACACATAGAGTTCGATGTTGCCAACAACAACAAAAATTCGAATCCGAACTTAGTTCTACCCCTTTTACCTGCACATCAGGCTATTTATACTCTGAATTTCACTCCGCTTCTTGATTTCATTAAATCATTGTGTGAGGTTTTGAGTTTAGAGCCATCCGCGAAGTTACACATTGAAAGCATTAGACATGATTTACTTCGTTTAATAAATGTTGGAGAATTTTCACCTGAGGCCATTTGGATTTCCCCCCATATGANTAGGGATTGTCCGTTGAACCAAGATCCCAA]




>consensus_9979#1
TTGATCCTGAACTTGATATGCATTGGCATTTAGCACGTTATTTACCTGAGACACGTGGTT
TAAGAAGTAAATTTCAAAGTCTTCTAGCAGGATATCTTTTGGCTATTTACAATGCAGTTC
GAAATGAACATCGACGTTTGATCGAATCTATTAAATGTTCTTTGTTTGCAATCTCTTATA
AAAAGGGTGTGAGATGTCAACTTTCCGAATTCTTATGAAGGACACCCATTTTTCTAATCA
ACGATTGTTTGCCTTGGCGCTCACTTGGTGTTTCGTTAGTTTCCCTTTAAGAGTCATGAT
AAACAGTTCTATACTTTTTTTTAGAATGAACCACACGGATCTCTTGAATTCGATGTTGAT
GTGAATAAAGATCCTAACTGTGTACATGAAGCTGAAACAACACCATACAAGTCAGACGCT
ACTGTCTCTCCTGGAGTTAGGGAATATGAAGAACGTTTATTTAGAGATCAATTGGCCCCA
GAGTTATACAATCTAATTATTCGCCTACAACGTAAAGCTGCTTGGATTGATCCAGAGTTA
ATGAGGAAAACTGACCCATCAATTGATAATAATAGGATCAACCAATTAAATAATGGTTCA
AACATATGTAGAAATAACGACCTTGTCAGTGCTTACCTTGCGGAAAAATCAGTCGGTTCA
CACATAGAGTTCGATGTTGCCAACAACAACAAAAATTCGAATCCGAACTTAGTTCTACCC
CTTTTACCTGCACATCAGGCTATTTATACTCTGAATTTCACTCCGCTTCTTGATTTCATT
AAATCATTGTGTGAGGTTTTGAGTTTAGAGCCATCCGCGAAGTTACACATTGAAAGCATT
AGACATGATTTACTTCGTTTAATAAATGTTGGAGAATTTTCACCTGAGGCCATTTGGATT
TCCCCCCATATGANTAGGGATTGTCCGTTGAACCAAGATCCCAA

consensusID : consensus_9979#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 576
fasta sequence

                              [AGCTCTGGACAGCCTCCAGACCGGAAGTTTACCGAATCCATGCTCAACTTTCCCAAGAACGCTTTCCCATTAAGTTGACTGACGCTAATGAAAAGTTCCCCAAGACTGTAATGAAGTCATTTCACGAATTGTCAAGGGAAGAACAAGCTGCAGTGGAGAAAAAGCGTATCACGGATTATTGCCGTCGAGCTTATAAACGTATTCACTTAACTAGAACTGAAGAACGAATTGCTATGGTCTGTCAACGAGAAAATTCTTTTTATGTTGATACAGTAAAGGCATTCCGTGACCGTCGATATAAATTCAAAGGTTTGACAAAGACATGGAAGCGTCATTACGATGATGCATGTGCAGCTCTGTCCGCTGGGACAGGTGATTCAAATGCTGTAAAAGAGGCTAATGCGATGCTTGTACTATATGATAGCCTTCAACTAGCACATAAATGTATTCTGAACTCTTTTTATGGCTATGTAATGCGACGTGGTGCTCGTTGGTATTCGATGGAAATGGCCGGCATTGTCTGTCATACTGGTGCTAATATCATAACTAAATCAAGAGAAATAGTGGAACANATCG]

[+] EMBL CD116221             [AGCTCTGGACAGCCTCCAGACCGGAAGTTTACCGAATCCATGCTCAACTTTCCCAAGAACGCTTTCCCATTAAGTTGACTGACGCTAATGAAAAGTTCCCCAAGACTGTAATGAAGTCATTTCACGAATTGTCAAGGGAAGAACAAGCTGCAGTGGAGAAAAAGCGTATCACGGATTATTGCCGTCGAGCTTATAAACGTATTCACTTAACTAGAACTGAAGAACGAATTGCTATGGTCTGTCAATGAGAAAATTCTTTTTATGTTGATACAGTAAAGGCATTCCGTGACCGTCGATATAAATTCAAAGGTTTGACAAAGACATGGAAGCGTCATTACGATGATGCATGTGCAGCTCTGTCCGCTGGGACACGTGATTCAAATGCTGTAAAAGAGGCTAATGCGATGCTTGTACTATATGATAGCCTTCAACTAGCACATAAATGTATTCTGAACTCTTTTTATGGCTATGTAATGCGACGTGGTGCTCGTTGGTATTCGATGGAAATGGCCGGCATTGTCTGTCATACTGGTGCTAATATCATAACTAAATCAAGAGAAATAGTGGAACANATCG]
[+] EMBL CD116084             [AGCTCTGGACAGCCTCCAGACCGGAAGTTTACCGAATCCATGCTCAACTTTCCCAAGAACGCTTTCCCATTAAGTTGACTGACGCTAATGAAAAGTTCCCCAAGACTGTAATGAAGTCATTTCACGAATTGTCAAGGGAAGAACAAGCTGCAGTGGAGAAAAAGCGTATCACGGATTATTGCCGTCGAGCTTATAAACGTATTCACTTAACTAGAACTGAAGAACGAATTGCTATGGTCTGTCAACGAGAAAATTCTTTTTATGTTGATACAGTAAAGGCATTCCGTGACCGTCGATATAAATTCAAAGGTTTGACAAAGACATGGAAGCGTCATTACGATGATGCATGTGCAGCTCTGTCCGCTGGGACAGGTGATTCAAATGCTGTAAAAGAGGCTAATGCGATGCTTGTACTATATGATAGCCTTCAACTAGCACATAAATGTATTCTGAACTCTTTTTATGGCTATGTAATGCGACGTGGTGCTCGTTGGTATTCGATGGANATGGCCGGCATTGTCTGTCATACTGGTGCTAATATCATAACTAAATCAAGAGAAATAGTGGAACAN    ]
[+] EMBL CD116114             [AGCTCTGGACAGCCTCCAGACCGGAAGTTTACCGAATCCATGCTCAACTTTCCCAAGAACGCTTTCCCATTAAGTTGACTGACGCTAATGAAAAGTTCCCCAAGACTGTAATGAAGTCATTTCACGAATTGTCAAGGGAAGAACAAGCTGCAGTGGAGAAAAAGCGTATCACGGATTATTGCCGTCGAGCTTATAAACGTATTCACTTAACTAGAACTGAAGAACGAATTGCTATGGTCTGTCAACGAGAAAATTCTTTTTATGTTGATACAGTAAAGGCATTCCGTGACCGTCGATATAAATTCAAAGGTTTGACAAAGACATGGAAGCGTCATTACGATGATGCATGTGCAGCTCTGTCCGCTGGGACAGGTGATTCAAATGCTGTAAAAGAGGCTAATGCGATGCTCGTACTATATGATAGCCTTCAACTAGCACATAAATGTATTCTGAACTCTTTTTATGGCTATGTAATGCGACGTGGTGCTCGTTGGTATTCGATGGAAATGGCCGGCATTGTCTGTCATACTGGTGCT ATATCA AACTAAATC AGAG AATAGTG          ]
[+] EMBL CD154462             [AGCTCTGGACAGCCTCCAGACCGGAAGTTTACCGAATCCATGCTCAACTTTCCCAAGAACGCTTTCCCATTAAGTTGACTGACGCTAATGAAAAGTTCCCCAAGACTGTAATGAAGTCATTTCACGAATTGTCAAGGGAAGAACAAGCTGCAGTGGAGAAAAAGCGTATCACGGATTATTGCCGTCGAGCTTATAAACGTATTCACTTAACTAGAACTGAAGAACGAATTGCTATGGTCTGTCAACGAGAAAATTCTTTTTATGTTGATACAGTAAAGGCATTCCGTGACCGTCGATATAAATTCAAAGGTTTGACAAAGACATGGAAGCGTCATTACGATGATGCATGTGCAGCTCTGTCCGCTGGGACAGGTGATTCAAATGCTGTAAAAGAGGCTAATGCGATGCTTGTACTATATGATAGCCTTCAACTAGCACATAAATGTATTCTGAACTCT                                                                                                                      ]




>consensus_9979#2
AGCTCTGGACAGCCTCCAGACCGGAAGTTTACCGAATCCATGCTCAACTTTCCCAAGAAC
GCTTTCCCATTAAGTTGACTGACGCTAATGAAAAGTTCCCCAAGACTGTAATGAAGTCAT
TTCACGAATTGTCAAGGGAAGAACAAGCTGCAGTGGAGAAAAAGCGTATCACGGATTATT
GCCGTCGAGCTTATAAACGTATTCACTTAACTAGAACTGAAGAACGAATTGCTATGGTCT
GTCAACGAGAAAATTCTTTTTATGTTGATACAGTAAAGGCATTCCGTGACCGTCGATATA
AATTCAAAGGTTTGACAAAGACATGGAAGCGTCATTACGATGATGCATGTGCAGCTCTGT
CCGCTGGGACAGGTGATTCAAATGCTGTAAAAGAGGCTAATGCGATGCTTGTACTATATG
ATAGCCTTCAACTAGCACATAAATGTATTCTGAACTCTTTTTATGGCTATGTAATGCGAC
GTGGTGCTCGTTGGTATTCGATGGAAATGGCCGGCATTGTCTGTCATACTGGTGCTAATA
TCATAACTAAATCAAGAGAAATAGTGGAACANATCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9979#0      ------------------------------------------------------------
consensus_9979#2      ------------------------------------------------------------
consensus_9979#1      TTGATCCTGAACTTGATATGCATTGGCATTTAGCACGTTATTTACCTGAGACACGTGGTT 60
                                                                                  

consensus_9979#0      ------------------------------------------------------------
consensus_9979#2      ------------------------------------------------------------
consensus_9979#1      TAAGAAGTAAATTTCAAAGTCTTCTAGCAGGATATCTTTTGGCTATTTACAATGCAGTTC 120
                                                                                  

consensus_9979#0      ------------------------------------------------------------
consensus_9979#2      ------------------------------------------------------------
consensus_9979#1      GAAATGAACATCGACGTTTGATCGAATCTATTAAATGTTCTTTGTTTGCAATCTCTTATA 180
                                                                                  

consensus_9979#0      ------------------------------------------------------------
consensus_9979#2      ------------------------------------------------------------
consensus_9979#1      AAAAGGGTGTGAGATGTCAACTTTCCGAATTCTTATGAAGGACACCCATTTTTCTAATCA 240
                                                                                  

consensus_9979#0      ------------------------------------------------------------
consensus_9979#2      ------------------------------------------------------------
consensus_9979#1      ACGATTGTTTGCCTTGGCGCTCACTTGGTGTTTCGTTAGTTTCCCTTTAAGAGTCATGAT 300
                                                                                  

consensus_9979#0      ----AGCTCTGGACAGCCTCC-AGACCGGA-------AGTTTACCGAATCCATGCTCAAC 48
consensus_9979#2      ----AGCTCTGGACAGCCTCC-AGACCGGA-------AGTTTACCGAATCCATGCTCAAC 48
consensus_9979#1      AAACAGTTCTATACTTTTTTTTAGAATGAACCACACGGATCTCTTGAATTCGATGTTGAT 360
                          ** ***  **    *   ***  * *         * *   **** *    *  * 

consensus_9979#0      TTTCCCAAGAACGCTTTCC-----CATTAAGTTGAC------TGACGCTAATGAAAAGTT 97
consensus_9979#2      TTTCCCAAGAACGCTTTCC-----CATTAAGTTGAC------TGACGCTAATGAAAAGTT 97
consensus_9979#1      GTGAATAAAGATCCTAACTGTGTACATGAAGCTGAAACAACACCATACAAGTCAGACGCT 420
                       *    **  *  **  *      *** *** ***         *  * * * * * * *

consensus_9979#0      CCC--CAAGACTGTAATGAAGTCATTTCACGAA---TTGTCAAGGGAAGAACAAGCTGCA 152
consensus_9979#2      CCC--CAAGACTGTAATGAAGTCATTTCACGAA---TTGTCAAGGGAAGAACAAGCTGCA 152
consensus_9979#1      ACTGTCTCTCCTGGAGTTAGGGAATATGAAGAACGTTTATTTAGAGATCAATTGGCCCCA 480
                       *   *    *** * * * *  ** * * ***   ** *  ** **  **   **  **

consensus_9979#0      GTGGAGAAAAAGCGTATCACGGATTATTGCCGTCGAGCT-TATAAACGTATTCAC--TTA 209
consensus_9979#2      GTGGAGAAAAAGCGTATCACGGATTATTGCCGTCGAGCT-TATAAACGTATTCAC--TTA 209
consensus_9979#1      GAGTTATACAATCTAATTATTCGCCTACAACGTAAAGCTGCTTGGATTGATCCAGAGTTA 540
                      * *    * ** *  ** *           ***  ****   *  *   ** **   ***

consensus_9979#0      ACTAG---AACTGAAGAACGAATTGCTAT------GGTCTGTCAATTAAATAATGGTTCA 260
consensus_9979#2      ACTAG---AACTGAAGAACGAATTGCTAT------GGTCTGTCAACGAGAAAATTCTTTT 260
consensus_9979#1      ATGAGGAAAACTGACCCATCAATTGATAATAATAGGATCAACCAATTAAATAATGGTTCA 600
                      *  **   ******   *  ***** **       * **   ***  * * ***  **  

consensus_9979#0      AACATATGTAGAAATAACGACCTTGTCAGTGCTTACCTTGCGGAAAAATCAGTCGGTTCA 320
consensus_9979#2      TATGT-TGATACAGTAAAGGCATT--CCGTGACCGTC--GATATAAATTCAAAGGTTTGA 315
consensus_9979#1      AACATATGTAGAAATAACGACCTTGTCAGTGCTTACCTTGCGGAAAAATCAGTCGGTTCA 660
                       *  * **    * *** * * **  * ***     *  *    *** ***   * ** *

consensus_9979#0      CACATAGAGTTCGATGTTGCCAACAACAACAAAAATTCGAATCCGAACTTAGTTCTACCC 380
consensus_9979#2      CAAAGACATGGAAGCGTCATTA-CGATGATGCATGTGCAGCTCTGTCCGCTGGGACAGGT 374
consensus_9979#1      CACATAGAGTTCGATGTTGCCAACAACAACAAAAATTCGAATCCGAACTTAGTTCTACCC 720
                      ** * * *       **    * * *  *   *  * *   ** *  *   *    *   

consensus_9979#0      CTTTTACCTGCACATCAGGCTATTTATACTCTGAATTTCACTCCGCTTCTTGATTTCATT 440
consensus_9979#2      GATTCAAATGCTGTAAAAGAGGCTAATGCGATGC------TTGTACTATATGATAGCCTT 428
consensus_9979#1      CTTTTACCTGCACATCAGGCTATTTATACTCTGAATTTCACTCCGCTTCTTGATTTCATT 780
                        ** *  ***     * *    * ** *  **        *   **   ****  * **

consensus_9979#0      AAATCATTGTGTGAGGTTTTGAGTTTAGAGCCATCCGCGAAGTTACACATTGAAAGCATT 500
consensus_9979#2      CAACTAGCACATAAA----TGTATTCTGAACTCTTTTTATGGCTATGTAATG-------- 476
consensus_9979#1      AAATCATTGTGTGAGGTTTTGAGTTTAGAGCCATCCGCGAAGTTACACATTGAAAGCATT 840
                       **  *     * *     **  **  ** *  *       * **   * **        

consensus_9979#0      AGACATGATTTACTTCGTT-TATANATGTTGGAGAATTTCAACCTGAGGCCATTTGGATT 559
consensus_9979#2      CGACGTGGTGC---TCGTT-GGTATTCGATGGAAATGGCCGGCATT--GTCTGTCATACT 530
consensus_9979#1      AGACATGATTTACTTCGTTTAATAAATGTTGGAGAATTTTCACCTGAGGCCATTTGGATT 900
                       *** ** *     *****   **   * **** *       * *   * *  *   * *

consensus_9979#0      TCCCCCCATATGATAAGGGATTGTCCGTTGAACCAAGATCCAAATAAATATACTTTTGAA 619
consensus_9979#2      GGTGCTAATATCATAACTAAAT-CAAGAGAAATAGTGGAACANATCG------------- 576
consensus_9979#1      TCCCCCCATATGANTAGGGATTGTCCGTTGAACCAAGATCCCAA---------------- 944
                          *  **** *  *   * *    *   **    *   *  *                

consensus_9979#0      ACAACTGCAATTCGTTCTCTACTAATTTATCTCCCAGAGGTTGCTTGCCCAACGTGTAAT 679
consensus_9979#2      ------------------------------------------------------------
consensus_9979#1      ------------------------------------------------------------
                                                                                  

consensus_9979#0      TTTACACGGGACATAGATGTTTGTCGTGATATACATGTCGTTTGGATAATGGCATCTATG 739
consensus_9979#2      ------------------------------------------------------------
consensus_9979#1      ------------------------------------------------------------
                                                                                  

consensus_9979#0      GATTCAATGCATGCTGAAACTAGACAATCAGGTTGTTGGGCTTGGGTATGTCCACATTGT 799
consensus_9979#2      ------------------------------------------------------------
consensus_9979#1      ------------------------------------------------------------
                                                                                  

consensus_9979#0      CGTACAGTTTATCCACGTGATAAGCTGGAAGAAGCTCTTGTTCAACAGCTTGAACAATTC 859
consensus_9979#2      ------------------------------------------------------------
consensus_9979#1      ------------------------------------------------------------
                                                                                  

consensus_9979#0      TCACTTCAACATTGTTTACAGGATCTCCAGTGTCCTAAATGTACTGTAGGTGGTGGGATA 919
consensus_9979#2      ------------------------------------------------------------
consensus_9979#1      ------------------------------------------------------------
                                                                                  

consensus_9979#0      CAGGAGTTGCTGATTGCAAATGGTGGGTCAGTTGCTCAATGTGCTGATTGTTCTACGAAG 979
consensus_9979#2      ------------------------------------------------------------
consensus_9979#1      ------------------------------------------------------------
                                                                                  

consensus_9979#0      CTGACACTAACTGTTCCAACTGGGCATGCAGTTTATCGTCGTTTAGATGTTTATCGTCAT 1039
consensus_9979#2      ------------------------------------------------------------
consensus_9979#1      ------------------------------------------------------------
                                                                                  

consensus_9979#0      ATCGGTGTACATTTCGGTTTTGAATACTTAGAACAAATCGCTTATTGGCTTATCCAGGGC 1099
consensus_9979#2      ------------------------------------------------------------
consensus_9979#1      ------------------------------------------------------------
                                                                                  

consensus_9979#0      TTACAACAATAGACAGATTCTTAATGTTTTTCATATGAACCGATATATAATGCATTTTAT 1159
consensus_9979#2      ------------------------------------------------------------
consensus_9979#1      ------------------------------------------------------------
                                                                                  

consensus_9979#0      AACACTATTTTTGCTAAAAGAATATTTTGTATTGGTTTCCACTTTTATATTGAGGATTAC 1219
consensus_9979#2      ------------------------------------------------------------
consensus_9979#1      ------------------------------------------------------------
                                                                                  

consensus_9979#0      TTGAAAATTCAATATTTTGTCTATCTTTTTCAATAAAAT 1258
consensus_9979#2      ---------------------------------------
consensus_9979#1      ---------------------------------------