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Schistosoma mansoni
cluster # 9980 cluster # 9980       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9980#0 length = 1034 sequences # 6  
consensus_9980#1 length = 941 sequences # 5  
consensus_9980#2 length = 310 sequences # 1  

consensusID : consensus_9980#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1034
fasta sequence
                              [CCGCCATGGGCGTGCCGCGGGNAATTCGATTATATTGCGCTTCTAGCTGGGAAGATTTATGGAACAGTTTGACTGTGAAGGTCGCTGATG-AGCTTGATACTCAGAAGAGTTTTATCAATAAATTGTTATTTTCTTCGTTTACAGCATACTAAAAGCTAGTTT-ATTCTCCACAAAATATATTCCTAGATTTTATTAGGTGTCTTAAATTCCGAGAATTTCGGTGATGTCGAAAATTATCCTGGTCACATCAAAACCACTTTCTCACAAAAATGTCTTCTGAGTCTTGGGAGTGGAATTGGGTGTCTGATTAACCCAAGAAGGGCTGGTAACGGAGTCTTTAGTCTTCTGTCCTTCAGATCTCCTCAGCACATTCGGAGAAACTAGTGGAGAACTCGCTTTACGCAAAATATTCAATAGAATGCTTAACCATCCTGATGGTTGTCGCATATTACGGTATACTTCGCTCCTTTATTGACTTTTAGTGACCGGCCAACTATTCGTACTAACACAGTTGATTTAGACAGCCTTCGTAAGCTACCTAAGGGTACGTTCGGAAAAGCGTATACGAAGTTTCTGGATAAATATGGTTATTCACCTGATGAAAGACACTATGTTAGATTTGTAGATGACCCGGATTTGTCTTACGTCATGCTGCGGTATCGGGAAATACATGATTTGGTTCATACTTAGCTTGGTCAACCTACTGACATGCTTGGTGAAGTCGTTGTTAAATGGGTAGAAGGCGTACAAACTCTTCTCCCTATGTGTTTAACTGGTGGTTGCTNTGGTTCTCTGCGCCTCGCACCCAAACANACGGAGTGTTTTGTAAGAAGTCATCTAGAGTATGCCATTCGTACCGGTAGAGAAGCGCGTTTTCTAATGTGTGTTTACTTCGAAG-ACATTGGGAAGAC-ATTT-GAAGA-TTAC-GTCATCTTT-AATA-TCAGTCGCCT-CA-CT-CCAG-AAACTGNA-TGAGA-GTG-TTTG-AGCAC-TTANA-AG-TAC-TTGTA-AT-AAG-AG-TTTCT-T-GTTTCTG-CACACTAAAGTTTCACTAC]

[+] EMBL CD093931             [CCGCCATGGGCGTGCCGCGGGNAATTCGATTATATTGCGCTTCTAGCTGGGAAGATTTATGGAACAGTTTGACTGTGAAGGTCGCTGATG AGCTTGATACTCAGAAGAGTTTTATCAATAAATTGTTATTTTCTTCGTTTACAGCATACTAAAAGCTAGTTT ATTCTCCACAAAATATATTCCTAGATTTTATTAGGGGTCTTAAATTCCGAGAATTTCGGTGATGTCGAAAATTATCCTGGTCACATCAAAACCACTTTCTCACAAAAATGTCTTCTGAGTCTTGGGAGTGGAATTGGGTGTCTGATTAACCCAAGAAGGGCTGGTAACGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD093920             [                                                          ATGGAACAGTTTGACTGTGAAGGTCGCTGATG AGCTTGATACTCAGAAGAGTTTTATCAATAAATTGTTATTTTCTTCGTTTACAGCATACTAAAAGCTAGTTT ATTCTCCACAAAATATATTCCTAGATTTTATTAGGTGTCTTAAATTCCGAGAATTTCGGTGATGTCGAAAATTATCCTGGTCACATCAAAACCACTTTCTCACAAAAATGTCTTCTGAGTCTTGGGAGTGGAATTGGGTGTCTGATTAACCCAAGAAGGGCTGGTAACGGAGTCTTTAGTCTTCTGTCCTTCAGATCTCCTCAGCACATTCGGAGAAACTAGTGGAGAACTCGCTTTACGCAAAATATTCAATAGAATGCTTAACCATCCTGATGGTTGTCGCATATTACGGTATACTTCGCTCCTTTATTGACTTTTAGTGACCGGCTAACTATTCGTACTAACACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD093924             [                                                          ATGGAACGGTTTGACTGTGAAGGTCGCTGATG AGCTTGATACTCAGAAGAGTTTTATCAATAAATTGTTATTTTCTTCGTTTACAGCATACTAAAAGCTAGTTT ATTCTCCACAAAATATATTCCTAGATTTTATTAGGTGTCTTAAATTCCGAGAATTTCGGTGATGTCGAAAATTATCCTGGTCACATCAAAACCACTTTCTCACAAAAATGTCTTCTGAGTCTTGGGAGTGGAATTGGGTGTCTGATTAACCCAAGAAGGGCTGGTAACGGAGTCTTTAGTCTTCTGTCCTTCAGATCTCCTCAGAACATTCGGAGAAACTAGTGGAGAACTCGCTTTACGCAAAATATTCAATAGAATGCTTAACCATCCTGATGGTTGTCGCATATTACGGTATACTTCGCTCCTTTATTGACTNTTAGTGACCGGCTAACTATTCGTACTAACACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD083050             [                                                                                      GATGAAGCTTGATACTCAGAAGAGTTTTATCAATAAATTGTTATTTTCTTCGTTTACAGCATACTAAAAGCTAGTTT ATTCTCCACAAAATATATTCCTAGATTTTATTAGGTGTCTTAAATTCCGAGAATTTCGGTGATGTCGAAAATTATCCTGGTCACATCAAAACCACTTTCTCACAAAAATGTCTTCTGAGTCTTGGGAGTGGAATTGGGTGTCTGATTAACCCAAGAAGGGCTGGTAACGGAGTCTTTAGTCTTCTGTCCTTCAGATCTCCTCAGCACATTCGGAGAAACTAGTGGAGAACTCGCTTTACGCAAAATATTCAATAGAATGCTTAACCATCCTGATGGTTGTCGCATATTACGGTATACTTCGCTCCTTTATTGACTTTTAGTGACCGGCCAACTATTCGTACTAACACAGTTGATTTAGACAGCCTTCGTAAGCTACCTAAGGGTACGTTCGGAAAAGCGTATGCGAAGTTTCTGGATAAATATGGTTATTCACCTGATGAAAGACACTATGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD079450             [                                                                                                                                                              gGTTTAATTCTCCACAAAATATATTCCTAGATTTTATTAGGTGTCTTAAATTCCGAGAGTCTTGGTGATGTCGAAAATTATCCTGGTCACATCAAAACCACGTTCTCACAAAAATGTCTTCTGAGTCTTGGGAGTGGAATTGGGTGTCTGATTAACCCAAGAAGGGCTGGTAACGGAATCTTTAGTCTTCTGTCCTTCAGATCTCCTCAGCACATTCGGAGAAACTAGTGGAGAACTCGCTTTACGCAAAATATTCAATAGAAAGCTTAACCATCCTGATGGTTGTCGCATATTACGGTATACTTCGCTCCTTTATTGACTTTTAGTGACCGGCCAACTATTCGTACTAACACAGTTGATTTAGACAGCCTTCGTAAGCTACCTAAGGGTACGTTCGGAAAAGCGTATACGAAGTTTCTGGATAAATATGGTTATTCACCTGATGAAAGACACTATGTTAGATTTGTAGATGACCCGGATTTGTCTTACGTCATGCTGCGGTATCGGGAAATACATGATTTGGTTCATACTTAGCTTGGTCAACCTACTGACATGCTTGGTGAAGTCGTTGTTAAATGGGTAGAAGGCGTACAAACTCTTCTCCCTATGTGTTTAACTGGTGGTTGCTNTGGTTCTCTGCGCCTCGCACCCAAACANACGGAGTGTTTTGTAAGAAGTCATCTAGAGTATGCCATTCGTACCGGTAGAGAAGCGCGTTTTCTAATGTGTGTTTACTTCGAAG ACATTGGGAAGAC ATTT GAAGA TTAC GTCATCTTT AATA TCAGTCGCCT CA CT CCAG AAACTGNA TGAGA GTG TTTG AGCAC TTANA AG TAC TTGTA AT AAG AG TTTCT T GTTTCTG CAC                ]
[-] EMBL CD073721             [                                                                                                                                                                                                                                                                                                                                                                                                  TGGAGAACTCGCTTTACGCAAAATATTCAATAGAAAGCTTAACCATCNTGATGGTTGTCGCATATTACGGTATACTTCGCTCCTTTATTGACTTTTAGTGACCGGCCAACTATTCGTACTAACACAGTTGATTTAGACAGCCTTCGTAAGCTACCTAAGGGTACGTTCGGAAAAGCGTATACGAAGTTTCTGGATAAATATGGTTATTCACCTGATGAAAGACACTATGTTAGATTTGTAGATGACCCGGATTTGTCTTACGTCATGCTGCGGTATCGGGAAATACATGATTTGGTTCATACTTAGCTTGGTCAACCTACTGACATGCTTGGTGAAGTCGTTGTTAAATGGGTAGAAGGCGTACAAACTCTTCTCCCTATGTGTTTAACTGGTGGTTGCTTTGGTTCTCTGCGCCTCGCACCCAAACAAACGGAGTGTTTTGTAAGAAGTCATCTAGAGTATGCCATTCGTACCGGTAGAGAAGCGCGTTTTCTAATGTGTGTTTACTTCGAAGAACATTGGGAAGACAATTTGGAAGATTTACGGTCATCTTTAAATATTCAGTCGCCTCCACCTCCCAGAAAACTGGATTGAGATGTGTTTTGAAGCACTTTAGATAGTTACTTTGTAGATAAAGTAGTTTTCTNTATTTTCTGTCA ACTAAAGTTTCACTAC]


>consensus_9980#0 CCGCCATGGGCGTGCCGCGGGNAATTCGATTATATTGCGCTTCTAGCTGGGAAGATTTAT GGAACAGTTTGACTGTGAAGGTCGCTGATGAGCTTGATACTCAGAAGAGTTTTATCAATA AATTGTTATTTTCTTCGTTTACAGCATACTAAAAGCTAGTTTATTCTCCACAAAATATAT TCCTAGATTTTATTAGGTGTCTTAAATTCCGAGAATTTCGGTGATGTCGAAAATTATCCT GGTCACATCAAAACCACTTTCTCACAAAAATGTCTTCTGAGTCTTGGGAGTGGAATTGGG TGTCTGATTAACCCAAGAAGGGCTGGTAACGGAGTCTTTAGTCTTCTGTCCTTCAGATCT CCTCAGCACATTCGGAGAAACTAGTGGAGAACTCGCTTTACGCAAAATATTCAATAGAAT GCTTAACCATCCTGATGGTTGTCGCATATTACGGTATACTTCGCTCCTTTATTGACTTTT AGTGACCGGCCAACTATTCGTACTAACACAGTTGATTTAGACAGCCTTCGTAAGCTACCT AAGGGTACGTTCGGAAAAGCGTATACGAAGTTTCTGGATAAATATGGTTATTCACCTGAT GAAAGACACTATGTTAGATTTGTAGATGACCCGGATTTGTCTTACGTCATGCTGCGGTAT CGGGAAATACATGATTTGGTTCATACTTAGCTTGGTCAACCTACTGACATGCTTGGTGAA GTCGTTGTTAAATGGGTAGAAGGCGTACAAACTCTTCTCCCTATGTGTTTAACTGGTGGT TGCTNTGGTTCTCTGCGCCTCGCACCCAAACANACGGAGTGTTTTGTAAGAAGTCATCTA GAGTATGCCATTCGTACCGGTAGAGAAGCGCGTTTTCTAATGTGTGTTTACTTCGAAGAC ATTGGGAAGACATTTGAAGATTACGTCATCTTTAATATCAGTCGCCTCACTCCAGAAACT GNATGAGAGTGTTTGAGCACTTANAAGTACTTGTAATAAGAGTTTCTTGTTTCTGCACAC TAAAGTTTCACTAC



consensusID : consensus_9980#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 941
fasta sequence
                              [CTCCAGGCCAANAATTCGGCACGAGGGTCGCTGATGAGCTTAATACTCAGAAGAGTTTTATCAATAAATCGTTATTTTCTTCGTTTACAGCATACTGAAAGCTAGTTTATTCTCCACAAAATATATTCCTAGATTTTATTAGGTGTCTTAAATTCCGAGAATTTCGGTGATGTCGAAAATTATCCTGGACACATCAAAATCACTTTCTCACAAAAATGTCTTCTGAGTCTTGGGAGTGGAATTGGGTGTCTGATTAACCCAAGAAGGGCTGATCTCCTCAGTACATTCGGAGAAACTAGTGGAGAACTCGCTTTACGCAAAATATTCAATAGAATGCTTAACCATCCTGATGGTTGTCGCATATTAAGTGACCGGCCAACTATTCGTACTAACACAGTTGATTTAGACAGCCTTCGTAAGCTACCTAAGGGTACGTTTGGAAAAGCGTATACGAAGTTTCTGGATAAATATGGTTATTCACCTGATGAAAGACACTATGTTAGATTTGTAGATGACCCGGATTTGGCTTACGTCATGCTGCGGTATCGGGAAATACATGATTTGGTTCATACTTTGCTTGGTCAACCTACTGACATGCTTGGTGAAGTCGTTGTTAAATGGGTAGAAGGCATACAAACTCTTCTCCCTATGTGTTTAACTGGTGGTTACTTTGGTTCTCTGCGCCTCGCACCCAAACAAACGGAGTGTTTTGTAAGAAGTCATCTAGAGTATGCCATTCGTACCGGTAGAGAAGCGCGTTTTTTAATGTGTGTTTACTTCGAAGAACATTGGG-AAGACAATTTGGAAGATTTTCGGTTATCTTTAAATATTCAGTCGCCTCCACCTCCCAGAAAACTAGATTGAGATGTGTTTTG-AA-CACTTTAGATAGTGACTTTGTAAATAGTGTAGTTTTCTTCTGTTTTCCGTCAACTAAAGTTNCA]

[+] EMBL CD079762             [CTCCAGGCCAANAATTCGGCACGAGGGTCGCTGATGAGCTTAATACTCAGAAGAGTTTTATCAATAAATCGTTATTTTCTTCGTTTACAGCATACTGAAAGCTAGTTTATTCTCCACAAAATATATTCCTAGATTTTATTAGGTGTCTTAAATTCCGAGAATTTCGGTGATGTCGAAAATTATCCTGGACACATCAAAATCACTTTCTCACAAAAATGTCTTCTGAGTCTTGGGAGTGGAATTGGGTGTCTGATTAACCCAAGAAGGGCTGATCTCCTCAGTACATTCGGAGAAACTAGTGGAGAACTCGCTTTACGCAAAATATTCAATAGAATGCTTAACCATCCTGATGGTTGTCGCATATTAAGTGACCGGCCAACTATTCGTACTAACACAGTTGATTTAGACAGCCTTCGTAAGCTACCTAAGGGTACGTTTGGAAAAGCGTATACGAAGTTTCTGGATAAATATGGTTATTCACCTGATGAAAGACACTATGTTAGATTTGTAGATGACCCGGATTTGGCTTACGTCATGCTGCGGTATCGGGAAATACATGATTTGGTTCATACTTTGCTTGGTCAACCTACTGACATGCTTGGTGAAGTCGTTGTTAAATGGGTAGAAGGCATACAAACTCTTCTCCCTATGTGTTTAACTGGTGGTTACTTTGGTTCTCTGCGCCTCGCACCCAAACAAACGGAGTGTTNTGTAAGAAGTCATCTAGAGTATGCCATTCGTACCGGTAGAGAAGCGCGTTTTCTAATGTGTGTTTACTTCGAAGAACATTGGGAAAGAC ATTTGGAAGATTTTC GTTATC TTAAATATTCAGTCNGCTCCACTNCCCAG AAACTAGA TGAGATGTGTTTTG AA CACTTTAGATAGTGACTTTGT AATAGTGTAGTTTTCTTCTGTTTTCCGTC ACTAAAGTTN  ]
[-] EMBL CD163222             [                                                                                                                                                                                                                                                                                                                                                                        ATATTAAGTGACCGGCCAACTAGTCGTACTAACACAGTTGATTTAGACAGCCTTCGTAAGCTACCTAAGGGTACGTTTGGAAAAGCGTATACGAAGTTTCTGGATAAATATGGTTATTCACCTGATGAAAGACACTATGTTAGATTTGTAGATGACCCGGATTTGGCTTACGTCATGCTGCGGTATCGGGAAATACATGATTTGGTTCGTACTTTGCTTGGTCAACCTACTGACATGCTTGGTGAAGTCGTTGTTAAATGGGTAGAAGGCATACAAACTCTTCTCCCTATGTGTTTAACTGGTGGTTACTTTGGTTCTCTGCGCCTCGCACCCAAACAAACGGAGTGTTTCGTAAGAAGTCATCTAGAGTATGCCATTC                                                                                                                                                                                                             ]
[-] EMBL CD074022             [                                                                                                                                                                                                                                                                                                                                                                                                         ACAGTTGATTTAGACAGCCTTCGTAAGCTACCTAAGGGTACGTTTGGAAAAGCGTATACGAAGTTTTTGGATAAATATGGTTATTCACCTGATGAAAGACACTATGTTAGATTTGTAGATGACCCGGATTTGGCTTACGTCATGCTGCGGTATCGGGAAATACATGATTTGGTTCATACTTTGCTTGGTCAACCTACTGACATGCTTGGTGAAGTCGTTGTTAAATGGGTAGAAGGCATACAAACTTTTTTCCCTATGTGTTTAACTGGTGGTTACTTTGGTTTTTTGCGCCTCGCACCCAAACAAACGGAGTGTTTTGTAAGAAGTCATTTAGAGTATGCCATTTGTACCGGTAGAGAAGCGCGTTTTTTAATGTGTGTTTACTTCGAAGAACATTGGG AAGACAATTTGGAAGATTTTCGGTTATCTTTAAATATTCAGTCGCCTCCACCTCCCAGAAAAATAGATTGAGATGTGTTTTGAAA CACTTTAGATAGTGACTTTGTAAATAGTGTAGTTTT TTCTGTTTTCCGTCAACTAAAGTTTCA]
[-] EMBL CD076625             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGGTTATTCACCTGATGAAAGACACTATGTTAGATTTGTAGATGACCCGGATTTGTCTTACGTCATGCTGCGGTATCGGGAAATACATGATTTGGTTCATACTTTGCTTGGTCAACCTACTGACATGCTTGGTGAAGTCGTTGTTAAATGGGTAGAAGGCATACAAACTCTTCTCCCTATGTGTTTAACTGGTGGTTACTTTGGTTCTTTGCGCCTCGCACCCAAACAAACGGAGTGTTTTGTAAGAAGTCATTTAGAGTATGCCATTCGTACCGGTAGAGAAGCGCGTTTTTTAATGTGTGTTTACTTCGAAGAACATTGGG AAGACAATTTGGAAGATTTACGGTCATCTTTAAATATTCAGTCGCCTCCACCTCCCAGAAAACTGGATTGAGA  TGTTTTG AAGCACTTTAGATAGTTACTTTGTAAATAGTGTAGTTTTC TCTGTTTTCCGTCAACTAAAG     ]
[-] EMBL CD135162             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGAAAGACACTATGTTAGATTTGTAGATGACCCGGATTTGGCTTACGTCATGCTGCGGTATCGGGAAATACATGATTTGGTTCATACTTTGCTTGGTCAACCTACTGACATGCTTGGTGAAGTCGTTGTTAAATGGGTAGAAGGCATACAAACTCTTCTCCCTATGTGTTTAACTGGTGGTTACTTTGGTTCTCTGCGCCTCGCACCCAAACAAACGGAGTGTTTTGTAAGAAGTCATCTAGAGTATGCCA                                                                                                                                                                                                                ]


>consensus_9980#1 CTCCAGGCCAANAATTCGGCACGAGGGTCGCTGATGAGCTTAATACTCAGAAGAGTTTTA TCAATAAATCGTTATTTTCTTCGTTTACAGCATACTGAAAGCTAGTTTATTCTCCACAAA ATATATTCCTAGATTTTATTAGGTGTCTTAAATTCCGAGAATTTCGGTGATGTCGAAAAT TATCCTGGACACATCAAAATCACTTTCTCACAAAAATGTCTTCTGAGTCTTGGGAGTGGA ATTGGGTGTCTGATTAACCCAAGAAGGGCTGATCTCCTCAGTACATTCGGAGAAACTAGT GGAGAACTCGCTTTACGCAAAATATTCAATAGAATGCTTAACCATCCTGATGGTTGTCGC ATATTAAGTGACCGGCCAACTATTCGTACTAACACAGTTGATTTAGACAGCCTTCGTAAG CTACCTAAGGGTACGTTTGGAAAAGCGTATACGAAGTTTCTGGATAAATATGGTTATTCA CCTGATGAAAGACACTATGTTAGATTTGTAGATGACCCGGATTTGGCTTACGTCATGCTG CGGTATCGGGAAATACATGATTTGGTTCATACTTTGCTTGGTCAACCTACTGACATGCTT GGTGAAGTCGTTGTTAAATGGGTAGAAGGCATACAAACTCTTCTCCCTATGTGTTTAACT GGTGGTTACTTTGGTTCTCTGCGCCTCGCACCCAAACAAACGGAGTGTTTTGTAAGAAGT CATCTAGAGTATGCCATTCGTACCGGTAGAGAAGCGCGTTTTTTAATGTGTGTTTACTTC GAAGAACATTGGGAAGACAATTTGGAAGATTTTCGGTTATCTTTAAATATTCAGTCGCCT CCACCTCCCAGAAAACTAGATTGAGATGTGTTTTGAACACTTTAGATAGTGACTTTGTAA ATAGTGTAGTTTTCTTCTGTTTTCCGTCAACTAAAGTTNCA



consensusID : consensus_9980#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 310
fasta sequence
                              [TCGGTCCGAGGCGCACCAAAACACTCCGTTTGTTTGGGTGCGAGGCGCAGAGAACCAAACGGAGTGTTTTGTAAGAAGTCATCTAGAGTATGCCATTCGTACCGGTAGAGAAGCGCGTTTTCTAATGTGTGTTTACTTCGAAGAACATTGGGAAGACAATTTGGAAGATTTTCGGTTATCTTTAAATATTCAGTCGCCTCCACCTCCCAGAAAACTAGATTGAGATGTGTTTTGAAACACTTTAGATAGTGACTTTGTAAATAGTGTAGTTTTCTCTGTTTTCCGTNNCACTAAGTTTCATTACAAAANA]

[+] EMBL CD078104             [TCGGTCCGAGGCGCACCAAAACACTCCGTTTGTTTGGGTGCGAGGCGCAGAGAACCAAACGGAGTGTTTTGTAAGAAGTCATCTAGAGTATGCCATTCGTACCGGTAGAGAAGCGCGTTTTCTAATGTGTGTTTACTTCGAAGAACATTGGGAAGACAATTTGGAAGATTTTCGGTTATCTTTAAATATTCAGTCGCCTCCACCTCCCAGAAAACTAGATTGAGATGTGTTTTGAAACACTTTAGATAGTGACTTTGTAAATAGTGTAGTTTTCTCTGTTTTCCGTNNCACTAAGTTTCATTACAAAANA]


>consensus_9980#2 TCGGTCCGAGGCGCACCAAAACACTCCGTTTGTTTGGGTGCGAGGCGCAGAGAACCAAAC GGAGTGTTTTGTAAGAAGTCATCTAGAGTATGCCATTCGTACCGGTAGAGAAGCGCGTTT TCTAATGTGTGTTTACTTCGAAGAACATTGGGAAGACAATTTGGAAGATTTTCGGTTATC TTTAAATATTCAGTCGCCTCCACCTCCCAGAAAACTAGATTGAGATGTGTTTTGAAACAC TTTAGATAGTGACTTTGTAAATAGTGTAGTTTTCTCTGTTTTCCGTNNCACTAAGTTTCA TTACAAAANA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9980#0      CCGCCATGGGCGTGCCGCGGGNAATTCGATTATATTGCGCTTCTAGCTGGGAAGATTTAT 60
consensus_9980#1      ------------------------------------------------------CTCCAG 6
consensus_9980#2      ------------------------------------------------------------
                                                                                  

consensus_9980#0      GG-AACAGTTTGACTGTGAAGGTCGCTGATGAGCTTGATACTCAGAAGAGTTTTATCAAT 119
consensus_9980#1      GCCAANAATTCGGC-ACGAGGGTCGCTGATGAGCTTAATACTCAGAAGAGTTTTATCAAT 65
consensus_9980#2      ------------------------------------------------------------
                                                                                  

consensus_9980#0      AAATTGTTATTTTCTTCGTTTACAGCATACTAAAAGCTAGTTTATTCTCCACAAAATATA 179
consensus_9980#1      AAATCGTTATTTTCTTCGTTTACAGCATACTGAAAGCTAGTTTATTCTCCACAAAATATA 125
consensus_9980#2      ------------------------------------------------------------
                                                                                  

consensus_9980#0      TTCCTAGATTTTATTAGGTGTCTTAAATTCCGAGAATTTCGGTGATGTCGAAAATTATCC 239
consensus_9980#1      TTCCTAGATTTTATTAGGTGTCTTAAATTCCGAGAATTTCGGTGATGTCGAAAATTATCC 185
consensus_9980#2      ------------------------------------------------------------
                                                                                  

consensus_9980#0      TGGTCACATCAAAACCACTTTCTCACAAAAATGTCTTCTGAGTCTTGGGAGTGGAATTGG 299
consensus_9980#1      TGGACACATCAAAATCACTTTCTCACAAAAATGTCTTCTGAGTCTTGGGAGTGGAATTGG 245
consensus_9980#2      ------------------------------------------------------------
                                                                                  

consensus_9980#0      GTGTCTGATTAACCCAAGAAGGGCTGGTAACGGAGTCTTTAGTCTTCTGTCCTTCAGATC 359
consensus_9980#1      GTGTCTGATTAACCCAAGAAGGGCTG-------------------------------ATC 274
consensus_9980#2      ------------------------------------------------------------
                                                                                  

consensus_9980#0      TCCTCAGCACATTCGGAGAAACTAGTGGAGAACTCGCTTTACGCAAAATATTCAATAGAA 419
consensus_9980#1      TCCTCAGTACATTCGGAGAAACTAGTGGAGAACTCGCTTTACGCAAAATATTCAATAGAA 334
consensus_9980#2      ------------------------------------------------------------
                                                                                  

consensus_9980#0      TGCTTAACCATCCTGATGGTTGTCGCATATTACGGTATACTTCGCTCCTTTATTGACTTT 479
consensus_9980#1      TGCTTAACCATCCTGATGGTTGTCGCATATTA---------------------------- 366
consensus_9980#2      ------------------------------------------------------------
                                                                                  

consensus_9980#0      TAGTGACCGGCCAACTATTCGTACTAACACAGTTGATTTAGACAGCCTTCGTAAGCTACC 539
consensus_9980#1      -AGTGACCGGCCAACTATTCGTACTAACACAGTTGATTTAGACAGCCTTCGTAAGCTACC 425
consensus_9980#2      ------------------------------------------------------------
                                                                                  

consensus_9980#0      TAAGGGTACGTTCGGAAAAGCGTATACGAAGTTTCTGGATAAATATGGTTATTCACCTGA 599
consensus_9980#1      TAAGGGTACGTTTGGAAAAGCGTATACGAAGTTTCTGGATAAATATGGTTATTCACCTGA 485
consensus_9980#2      ------------------------------------------------------------
                                                                                  

consensus_9980#0      TGAAAGACACTATGTTAGATTTGTAGATGACCCGGATTTGTCTTACGTCATGCTGCGGTA 659
consensus_9980#1      TGAAAGACACTATGTTAGATTTGTAGATGACCCGGATTTGGCTTACGTCATGCTGCGGTA 545
consensus_9980#2      ------------------------------------------------------------
                                                                                  

consensus_9980#0      TCGGGAAATACATGATTTGGTTCATACTTAGCTTGGTCAACCTACTGACATGCTTGGTGA 719
consensus_9980#1      TCGGGAAATACATGATTTGGTTCATACTTTGCTTGGTCAACCTACTGACATGCTTGGTGA 605
consensus_9980#2      ------------------------------------------------------------
                                                                                  

consensus_9980#0      AGTCGTTGTTAAATGGGTAGAAGGCGTACAAACTCTTCTCCCTATGTGTTTAACTGGTGG 779
consensus_9980#1      AGTCGTTGTTAAATGGGTAGAAGGCATACAAACTCTTCTCCCTATGTGTTTAACTGGTGG 665
consensus_9980#2      -----------------------------------TCGGTCCGAGGCGCACCAA-AACAC 24
                                                         *    ** * * *    *       

consensus_9980#0      TTGCTNTGGTTCTCTGCGCCTCGCACCCAAACANACGGAGTGTTTTGTAAGAAGTCATCT 839
consensus_9980#1      TTACTTTGGTTCTCTGCGCCTCGCACCCAAACAAACGGAGTGTTTTGTAAGAAGTCATCT 725
consensus_9980#2      TCCGTTTGTTTGGGTGCGAGGCGCAGAGAACCAAACGGAGTGTTTTGTAAGAAGTCATCT 84
                      *   * ** **   ****   ****   ** ** **************************

consensus_9980#0      AGAGTATGCCATTCGTACCGGTAGAGAAGCGCGTTTTCTAATGTGTGTTTACTTCGAAGA 899
consensus_9980#1      AGAGTATGCCATTCGTACCGGTAGAGAAGCGCGTTTTTTAATGTGTGTTTACTTCGAAGA 785
consensus_9980#2      AGAGTATGCCATTCGTACCGGTAGAGAAGCGCGTTTTCTAATGTGTGTTTACTTCGAAGA 144
                      ************************************* **********************

consensus_9980#0      -CATTGGGAAGACATTT--GAAGATTAC--GTCATCTTTAA-TAT-CAGTCGCCTCA--- 949
consensus_9980#1      ACATTGGGAAGACAATTTGGAAGATTTTCGGTTATCTTTAAATATTCAGTCGCCTCCACC 845
consensus_9980#2      ACATTGGGAAGACAATTTGGAAGATTTTCGGTTATCTTTAAATATTCAGTCGCCTCCACC 204
                       ************* **  *******    ** ******** *** **********    

consensus_9980#0      -CTCCAGAAACTGNATGAGAGTGT---TTGAG-CACTTANAA----GTACTTGTAATAAG 1000
consensus_9980#1      TCCCAGAAAACTAGATTGAGATGTGTTTTGAA-CACTTTAGATAGTGACTTTGTAAATAG 904
consensus_9980#2      TCCCAGAAAACTAGATTGAGATGTGTTTTGAAACACTTTAGATAGTGACTTTGTAAATAG 264
                       * *   *****  **     ***   ****  *****   *    *   ******  **

consensus_9980#0      AGT-------TTCTTGTTTCTGCACACTAAAGTTTCACTAC------ 1034
consensus_9980#1      TGTAGTTTTCTTCTGTTTTCCGTCAACTAAAGTTNCA---------- 941
consensus_9980#2      TGTAGTTTT-CTCTGTTTTCCGTNNCACTAAGTTTCATTACAAAANA 310
                       **        ***  **** *       ***** **          




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)