cluster # 9987

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Schistosoma mansoni
cluster # 9987 cluster # 9987 Sequences # 12 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9987#0 length = 932 sequences # 2
consensus_9987#1 length = 682 sequences # 4

consensus_9987#2 length = 321 sequences # 5
consensus_9987#3 length = 192 sequences # 1

consensusID : consensus_9987#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 932
fasta sequence

                              [CTCCAGGCCAANAATTTGGCACGAGGATTATATTGAACGAAAATGTAGTGAACCAGTGTTTCCACCAAACAATGTATTTCAAGTGTTTACCTTTCAGAAAAGTTATAGGGTAGAATAGTTAAACATACAAAAGTGTGTTAGAAATTTAGACGGATAAGGGCTTCGAACTAGTCACGTAACTGGACACAAGATAACCAATAGGAATAAATTCGCACATCTAACAGTCACATGGCTGTCTTGACCTTTCGTAGCCCAAATAAGTATACGAATAAATTACTTCCATGTGCTTGCACTTAATGTTGTCTTTCCTTTTGTACATTTTAATTTTTCTTTTATTTAGGTTTATTCGGCTATATTAGGTTATGTGGTTGCGCTAGATCTAACTGATCGATCACTTCAGAATCAACTAAAAGCAAGCGGACTCCCATGGACGATGGCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCCTTTGGATTCACTGCCGGCCGGTATTTTAACGTCGCGTCAGGAATTCCAAAACGTAAATAATGAGATTTGGTTGAAGGTAAACCAGGTGGAACGACAACGATCAAAATTGAATATGATGGTCTGGACACCAGCAGAGTTAATATCGATAATTACCAAAAGAATTTCACTACAATATGGAGACCTAATTNTAACCGGTACACCTGCTGGTGTAGGACCTCTGAGATCTTGTGATGAAATCGAAGCTGGATTAGATGATTTATGNTTCTAT-AAATTTAGCGTAGAATGACTATATTTTTACTGAAAGTTGA-TGTCTTCGT-AAACTACTT-ATGCTNCACTG-GTG-TCGC-AGACATT-AAACTGNNT-ACGCA-CTTNACATNAGGNNTG-TACTGNNGT-AGA-TATA-CTTNGTCACTGG--AACGTC-TTTCA-CTG-GGNA-TATCAG-GT-CCGACT-AGTCACACTTG]

[+] EMBL CD081146             [CTCCAGGCCAANAATTTGGCACGAGGATTATATTGAACGAAAATGTAGTGAACCAGTGTTTCCACCAAACAATGTATTTCAAGTGTTTACCTTTCAGAAAAGTTATAGGGTAGAATAGTTAAACATACAAAAGTGTGTTAGAAATTTAGACGGATAAGGGCTTCGAACTAGTCACGTAACTGGACACAAGATAACCAATAGGAATAAATTCGCACATCTAACAGTCACATGGCTGTCTTGACCTTTCGTAGCCCAAATAAGTATACGAATAAATTACTTCCATGTGCTTGCACTTAATGTTGTCTTTCCTTTTGTACATTTTAATTTTTCTTTTATTTAGGTTTATTCGGCTATATTAGGTTATGTGGTTGCGCTAGATCTAACTGATCGATCACTTCAGAATCAACTAAAAGCAAGCGGACTCCCATGGACGATGGCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCCTTTGGATTCACTGCCGGCCGGTATTTTAACGTCGCGTCAGGAATTCCAAAACGTAAATAATGAGATTTGGTTGAAGGTAAACCAGGTGGAACGACAACGATCAAAATTGAATATGATGGTCTGGACACCAGCAGAGTTAATATCGATAATTACCAAAAGAATTTCACTACAATATGGAGACCTAATTNTAACCGGTACACCTGCTGGTGTAGGACCTCTGAGATCTTGTGATGAAATCGAAGCTGGATTAGATGATTTATGNTTCTAT AAATTTAGCGTAGAATGACTATATTTTTACTGAAAGTTGA TGTCTTCGT AAACTACTT ATGCTNCACTG GTG TCGC AGACATT AAACTGNNT ACGCA CTTNACATNAGGNNTG TACTGNNGT AGA TATA CTTNGTCACTGG  AACGTC TTTCA CTG GGNA TATCAG GT CCGACT AGTC       ]
[-] EMBL CD074966             [                                                                                                                                                                                                                                                                                  TACTTCCATGTGCTTGCACTTAATGTTGTCTTTCCTTTTGTACATTTTAATTTTTCTTTTATTTAGGTTTATTCGGCTATATTAGGTTATGTGGTTGCGCTAGATCTAACTGATCGATCACTTCAGAATCAACTAAAAGCAAGCGGACTCCCATGGACGATGGCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCCTTTGGATTCACTGCCGGCCGGTATTTTAACGTCGCGTCAGGAATTCCAAAACGTAAATAATGAGATTTGGTTGAAGGTAAACCAGGTGGAACGACAACGATCAAAATTGAATATGATGGTCTGGACACCAGCAGAGTTAATATCGATAATTACCAAAAGAATTTCACTACAATATGGAGACCTAATTTTAACCGGTACACCTGCTGGTGTAGGACCTCTGAGATCTTGTGATGAAATCGAAGCTGGATTAGATGATTTATG TTCTATAAAATTTAGCGTAGAATGACTATATTTTTACTG AAGTTGATTGTCTTCGTAAAACTACTTCATGCTTCACTGTGTGTTCGCAAGACATTAAAACTGTTTAACGCACCTTTACATTATGGTTGTTACTGTGTTAAGATTATACCTTTGTCACTGGAAAACGTCTTTTCAGCTGTGGTATTATCAGTGTCCCGACTAAGT ACACTTG]




>consensus_9987#0
CTCCAGGCCAANAATTTGGCACGAGGATTATATTGAACGAAAATGTAGTGAACCAGTGTT
TCCACCAAACAATGTATTTCAAGTGTTTACCTTTCAGAAAAGTTATAGGGTAGAATAGTT
AAACATACAAAAGTGTGTTAGAAATTTAGACGGATAAGGGCTTCGAACTAGTCACGTAAC
TGGACACAAGATAACCAATAGGAATAAATTCGCACATCTAACAGTCACATGGCTGTCTTG
ACCTTTCGTAGCCCAAATAAGTATACGAATAAATTACTTCCATGTGCTTGCACTTAATGT
TGTCTTTCCTTTTGTACATTTTAATTTTTCTTTTATTTAGGTTTATTCGGCTATATTAGG
TTATGTGGTTGCGCTAGATCTAACTGATCGATCACTTCAGAATCAACTAAAAGCAAGCGG
ACTCCCATGGACGATGGCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCC
TTTGGATTCACTGCCGGCCGGTATTTTAACGTCGCGTCAGGAATTCCAAAACGTAAATAA
TGAGATTTGGTTGAAGGTAAACCAGGTGGAACGACAACGATCAAAATTGAATATGATGGT
CTGGACACCAGCAGAGTTAATATCGATAATTACCAAAAGAATTTCACTACAATATGGAGA
CCTAATTNTAACCGGTACACCTGCTGGTGTAGGACCTCTGAGATCTTGTGATGAAATCGA
AGCTGGATTAGATGATTTATGNTTCTATAAATTTAGCGTAGAATGACTATATTTTTACTG
AAAGTTGATGTCTTCGTAAACTACTTATGCTNCACTGGTGTCGCAGACATTAAACTGNNT
ACGCACTTNACATNAGGNNTGTACTGNNGTAGATATACTTNGTCACTGGAACGTCTTTCA
CTGGGNATATCAGGTCCGACTAGTCACACTTG

consensusID : consensus_9987#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 682
fasta sequence

                              [ACAACGCAGCGATTAATACTCCTTGCCTTAAGTATAGTCAGTAAGGTTTATTCGGCTATATTAGGTTATGTGGTTGCGCTAGATCTAACTGATCGATCACTTCAGAATCAACTAAAAGCAAGCGGACTCCCATGGACGATGGCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCCTTTGGATTCACTGCCGGCCGGTATTTTAACGTCGCGTCAGGAATTCCAAAACGTAAATAATGAGATTTGGTTGAAGGTAAACCAGGTGGAACGACAACGATCAAAATTGAATATGATGGTCTGGACACCAGCAGAGTTAATATCGATAATTACCAAAAGAATTTCACTACAATATGGAGACCTAATTTTAACCGGTACACCTGCTGGTGTAGGACCTCTGAGATCTTGTGATGAAATCGAAGCTGGATTAGATGATTTATGTTCTATAAAATTTAGCGTAGAATGACTATATTTTTACTGAAGTTGATTGTCTTCGTAAAACTACTTCATGCTTCACTGTGTGTTCGCAAGACATTAAAACTGTTTAACGCACCTTTACATTATGGTTGTTACTGTGTTAAGATTATACCTTTGTCACTGGAAAACGTCTTTTCAGCTGTGGTATTATCAGTGTCCCGACTAAGTACACTTGTTTACAGCTAAAAAAAAAAAAAAAA]

[-] EMBL CD137007             [ACAACGCAGCGATTAATACTCCTTGCCTTAAGTATAGTCAGTAAGGTTTATTCGGCTATATTAGGTTATGTGGTTGCGCTAGATCTAACTGATCGATCACTTCAGAATCAACTAAAAGCAAGCGGACTCCCATGGACGATGGCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCCTTTGGATTCACTGCCGGCCGGTATTTTAACGTCGCGTCAGGAATTCCAAAACGTAAATAATGAGATTTGGTTGAAGGTAAACCAGGTGGAACGACAACGATC                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD117220             [                                                                           GCGCTAGATCTAACTGATCGATCACTTCAGAATCAACTAAAAGCAAGCGGACTCCCATGGACGATGGCTAAATGTTTCGACACAGCTTGCCCGGTGGGGCCAATTCTTCCTTTGGATTCACTGCCGGCCGGTATTTTAACGTCACGTCAGGAATTCCAAAACGTAAATAATGAGATTTGGTTGAAGGTAACCCAGGTGGAACGACAACGATCAAAATTGAATATGATGGTCTGGACACCAGCAGAGTTAATATCGATAATTACCAAAAGAATTTCACTA                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD180326             [                                                                                                                                                     TTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCCTTTGGATTCACTGCCGGCCGGTATTTTAACGTCGCGTCAGGAATTCCAAAACGTAAATAATGAGATTTGGTTGAAGGTAAACCAGGTGGAACGACAACGATCAAAATTGAATATGATGGTCTGGACACCAGCAGAGTTAATATCGATAATTACCAAAAGAATTTCACTACAATATGGAGACCTAATTTTAACCGGTACACCTGCTGGTGTAGGACCTCTGAGATCTTGTGATGAAATCGAAGCTGGATTAGATGATTTATGTTCTATAAAATTTAGCGTAGAATGACTATATTTTTACTGAAGTTGATTGTCTTCGTAAAACTACTTCATGCTTCACTGTGTGTTCGCAAGACATTAAAACTGTTTAACGCACCTTTACATTATGGTTGTTACTGTGTTAAGATTAT                                                                                          ]
[-] EMBL AI395691             [                                                                                                                                                                                                                                                                                                                                   AATATCGATAA TACCAAAAGAA TTCACTACAATATGGAGACCTAATTTTAACCGGTACACCTGCTGGTGTAGGACCTCTGAGATCTTGTGATGAAATCGAAGCTGGATT GATGATTTATGTTCTATAAAATTTAGCGTAGAATGACTATATTTTTACTGAAGTTGATTGTCTTCGTAAAACTACTTCATGCTTCACTGTGTGTTCGCAAGACATTAAAACTGTTTAACGCACCTTTACATTATGGTTGTTACTGTGTTAAGATTATACCTTTGTCACTGGAAAACGTCTTTTCAGCTGTGGTATTATCAGTGTCCCGACTAAGTACACTTGTTTACAGCTAAAAAAAAAAAAAAAA]




>consensus_9987#1
ACAACGCAGCGATTAATACTCCTTGCCTTAAGTATAGTCAGTAAGGTTTATTCGGCTATA
TTAGGTTATGTGGTTGCGCTAGATCTAACTGATCGATCACTTCAGAATCAACTAAAAGCA
AGCGGACTCCCATGGACGATGGCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATT
CTTCCTTTGGATTCACTGCCGGCCGGTATTTTAACGTCGCGTCAGGAATTCCAAAACGTA
AATAATGAGATTTGGTTGAAGGTAAACCAGGTGGAACGACAACGATCAAAATTGAATATG
ATGGTCTGGACACCAGCAGAGTTAATATCGATAATTACCAAAAGAATTTCACTACAATAT
GGAGACCTAATTTTAACCGGTACACCTGCTGGTGTAGGACCTCTGAGATCTTGTGATGAA
ATCGAAGCTGGATTAGATGATTTATGTTCTATAAAATTTAGCGTAGAATGACTATATTTT
TACTGAAGTTGATTGTCTTCGTAAAACTACTTCATGCTTCACTGTGTGTTCGCAAGACAT
TAAAACTGTTTAACGCACCTTTACATTATGGTTGTTACTGTGTTAAGATTATACCTTTGT
CACTGGAAAACGTCTTTTCAGCTGTGGTATTATCAGTGTCCCGACTAAGTACACTTGTTT
ACAGCTAAAAAAAAAAAAAAAA

consensusID : consensus_9987#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 321
fasta sequence

                              [TGTGGTGAAGGTAGATATGTTTATTCGGCTATATTAGGTTATGTGGTTGCGCTAGATCTAACTGATCGATCACTTCAGAATCAACTAAAAGCAAGCGGACTCCCATGGACGATGGCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCCTTTGGATTCACTGCCGGCCGGTATTTTAACGTCGCGTCAGGAATTCCAAAACGT-AAATAATGAG-ATTTGGTTGAAGGT-AAACCAGGTGGAACGACAACGATCAAAATTGAATATGATGGTCTGGACACCAGCAGAGTTAATATCGATAATTACCAAAAGAATT]

[-] EMBL CD137022             [TGTGGTGAAGGTAGATATGTTTATTCGGCTATATTAGGTTATGTGGTTGCGCTAGATCTAACTGATCGATCACTTCAGAATCAACTAAAAGCAAGCGGACTCCCATGGACGATGGCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCCTTTGGATTCACTGCCGGCCGGTATTTTAACGTCGCGTCAGGAATTCCAAAACGT AAATAATGAG ATTTGGTTGAAGGT AAACCAGGTGGAACGACAACGATCAAAATTGAATATGATGGTCTGGACACCAGCAGAGTTAATATCGATAATTACCAAAAGAATT]
[-] EMBL BG931568             [                                                                                                    TCCCATGGACGATGGCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCCTTTGGATTCACTGCCGGCCGGTATTTTAACG                                                                                                                                       ]
[+] EMBL CD169914             [                                                                                                                 GGCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCCTTTGGATTCACTGCCGGCCGGTATTTTAACGTCGCGTCAGGAATTCCAAAACGTAAAATAATGAGAATTTGGTTGAAGGTAAAACCAGGTGGAACGACAACGATC                                                             ]
[+] EMBL CD092366             [                                                                                                                  GCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCCTTTGGATTCACTGCCGGCCGGTATTTTAACGTCGCGTCAGGAATTCCAAAACGT AAATAATGAG ATTTGGTTGAAGGT AAACCAGGTGGAACGACAACGATCAAAATTGAATATGATGGTCTGGACACCAGCAGAGTTAATATCGATAATTACCAAAAGAAT ]
[-] EMBL CD169928             [                                                                                                                     AAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCCTTTGGATTCACTGCCGGCCGGTATTTTAACGTCGCGTCAGGAATTCCCAAACGT AAATAATGAG ATTTGGTTGAAGGT AAACCAGGTGGAACGACAACGATCAAAATTGAATATGATGGTCTGGACCCCAGCAGAGTTAATATCGATAATTACCAAAAGAATT]




>consensus_9987#2
TGTGGTGAAGGTAGATATGTTTATTCGGCTATATTAGGTTATGTGGTTGCGCTAGATCTA
ACTGATCGATCACTTCAGAATCAACTAAAAGCAAGCGGACTCCCATGGACGATGGCTAAA
TGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCCTTTGGATTCACTGCCGGCCGGT
ATTTTAACGTCGCGTCAGGAATTCCAAAACGTAAATAATGAGATTTGGTTGAAGGTAAAC
CAGGTGGAACGACAACGATCAAAATTGAATATGATGGTCTGGACACCAGCAGAGTTAATA
TCGATAATTACCAAAAGAATT

consensusID : consensus_9987#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 192
fasta sequence

                              [CTCATACGAAACGGCGGGCAGGTTTATTCGGCTATATTAGGTTATGTGGTTGCGCTAGATCTAACTGATCGATCACTTCAGAATCAACTAAAAGCAAGCGGGCTCCCATGGACGATGGCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCCTTTGGATTCACTGCCGGCCGGTATTTTAACG]

[-] EMBL BG932896             [CTCATACGAAACGGCGGGCAGGTTTATTCGGCTATATTAGGTTATGTGGTTGCGCTAGATCTAACTGATCGATCACTTCAGAATCAACTAAAAGCAAGCGGGCTCCCATGGACGATGGCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCCTTTGGATTCACTGCCGGCCGGTATTTTAACG]




>consensus_9987#3
CTCATACGAAACGGCGGGCAGGTTTATTCGGCTATATTAGGTTATGTGGTTGCGCTAGAT
CTAACTGATCGATCACTTCAGAATCAACTAAAAGCAAGCGGGCTCCCATGGACGATGGCT
AAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCCTTTGGATTCACTGCCGGCC
GGTATTTTAACG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9987#0      CTCCAGGCCAANAATTTGGCACGAGGATTATATTGAACGAAAATGTAGTGAACCAGTGTT 60
consensus_9987#3      ------------------------------------------------------------
consensus_9987#1      ------------------------------------------------------------
consensus_9987#2      ------------------------------------------------------------
                                                                                  

consensus_9987#0      TCCACCAAACAATGTATTTCAAGTGTTTACCTTTCAGAAAAGTTATAGGGTAGAATAGTT 120
consensus_9987#3      ------------------------------------------------------------
consensus_9987#1      ------------------------------------------------------------
consensus_9987#2      ------------------------------------------------------------
                                                                                  

consensus_9987#0      AAACATACAAAAGTGTGTTAGAAATTTAGACGGATAAGGGCTTCGAACTAGTCACGTAAC 180
consensus_9987#3      ------------------------------------------------------------
consensus_9987#1      ------------------------------------------------------------
consensus_9987#2      ------------------------------------------------------------
                                                                                  

consensus_9987#0      TGGACACAAGATAACCAATAGGAATAAATTCGCACATCTAACAGTCACATGGCTGTCTTG 240
consensus_9987#3      ------------------------------------------------------------
consensus_9987#1      ------------------------------------------------------------
consensus_9987#2      ------------------------------------------------------------
                                                                                  

consensus_9987#0      ACCTTTCGTAGCCCAAATAAGTATACGAATAAATTACTTCCATGTGCTTGCACTTAATGT 300
consensus_9987#3      ------------------------------------------------------------
consensus_9987#1      -----------------------------------------------------ACAACGC 7
consensus_9987#2      ------------------------------------------------------------
                                                                                  

consensus_9987#0      TGTCTTTCCTTTTGTACATTTTAATTTTTCTTTTATTTAGGTTTATTCGGCTATATTAGG 360
consensus_9987#3      -------------------CTCATACGAAACGGCGGGCAGGTTTATTCGGCTATATTAGG 41
consensus_9987#1      AGCGATTAATACTCCTTGCCTTAAGTATA--GTCAGTAAGGTTTATTCGGCTATATTAGG 65
consensus_9987#2      --------------------TGTGGTGAA--GGTAGATATGTTTATTCGGCTATATTAGG 38
                                          *                 * ********************

consensus_9987#0      TTATGTGGTTGCGCTAGATCTAACTGATCGATCACTTCAGAATCAACTAAAAGCAAGCGG 420
consensus_9987#3      TTATGTGGTTGCGCTAGATCTAACTGATCGATCACTTCAGAATCAACTAAAAGCAAGCGG 101
consensus_9987#1      TTATGTGGTTGCGCTAGATCTAACTGATCGATCACTTCAGAATCAACTAAAAGCAAGCGG 125
consensus_9987#2      TTATGTGGTTGCGCTAGATCTAACTGATCGATCACTTCAGAATCAACTAAAAGCAAGCGG 98
                      ************************************************************

consensus_9987#0      ACTCCCATGGACGATGGCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCC 480
consensus_9987#3      GCTCCCATGGACGATGGCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCC 161
consensus_9987#1      ACTCCCATGGACGATGGCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCC 185
consensus_9987#2      ACTCCCATGGACGATGGCTAAATGTTTCGACACAGCTTGCCCTGTGGGGCCAATTCTTCC 158
                       ***********************************************************

consensus_9987#0      TTTGGATTCACTGCCGGCCGGTATTTTAACGTCGCGTCAGGAATTCCAAAACGTAAATAA 540
consensus_9987#3      TTTGGATTCACTGCCGGCCGGTATTTTAACG----------------------------- 192
consensus_9987#1      TTTGGATTCACTGCCGGCCGGTATTTTAACGTCGCGTCAGGAATTCCAAAACGTAAATAA 245
consensus_9987#2      TTTGGATTCACTGCCGGCCGGTATTTTAACGTCGCGTCAGGAATTCCAAAACGTAAATAA 218
                      *******************************                             

consensus_9987#0      TGAGATTTGGTTGAAGGTAAACCAGGTGGAACGACAACGATCAAAATTGAATATGATGGT 600
consensus_9987#3      ------------------------------------------------------------
consensus_9987#1      TGAGATTTGGTTGAAGGTAAACCAGGTGGAACGACAACGATCAAAATTGAATATGATGGT 305
consensus_9987#2      TGAGATTTGGTTGAAGGTAAACCAGGTGGAACGACAACGATCAAAATTGAATATGATGGT 278
                                                                                  

consensus_9987#0      CTGGACACCAGCAGAGTTAATATCGATAATTACCAAAAGAATTTCACTACAATATGGAGA 660
consensus_9987#3      ------------------------------------------------------------
consensus_9987#1      CTGGACACCAGCAGAGTTAATATCGATAATTACCAAAAGAATTTCACTACAATATGGAGA 365
consensus_9987#2      CTGGACACCAGCAGAGTTAATATCGATAATTACCAAAAGAATT----------------- 321
                                                                                  

consensus_9987#0      CCTAATTNTAACCGGTACACCTGCTGGTGTAGGACCTCTGAGATCTTGTGATGAAATCGA 720
consensus_9987#3      ------------------------------------------------------------
consensus_9987#1      CCTAATTTTAACCGGTACACCTGCTGGTGTAGGACCTCTGAGATCTTGTGATGAAATCGA 425
consensus_9987#2      ------------------------------------------------------------
                                                                                  

consensus_9987#0      AGCTGGATTAGATGATTTATGNTTCTATAAATTTAGCGTAGAATGACTATATTTTTACTG 780
consensus_9987#3      ------------------------------------------------------------
consensus_9987#1      AGCTGGATTAGATGATTTATGTTCTATAAAATTTAGCGTAGAATGACTATATTTTTACTG 485
consensus_9987#2      ------------------------------------------------------------
                                                                                  

consensus_9987#0      AAAGTTGATGTCTTCGTAAACTA--CTTATGCTNCACTG---GTGTCGCAGACATTAAAC 835
consensus_9987#3      ------------------------------------------------------------
consensus_9987#1      AAGTTGATTGTCTTCGTAAAACTACTTCATGCTTCACTGTGTGTTCGCAAGACATTAAAA 545
consensus_9987#2      ------------------------------------------------------------
                                                                                  

consensus_9987#0      TGNNTACGCAC---TTNACATNAGGNNTGTACTGNNGTAGATATA----CTTNGTCACTG 888
consensus_9987#3      ------------------------------------------------------------
consensus_9987#1      CTGTTTAACGCACCTTTACATTATGGTTGTTACTGTGTTAAGATTATACCTTTGTCACTG 605
consensus_9987#2      ------------------------------------------------------------
                                                                                  

consensus_9987#0      GAACGTCTTTCACTGGGNATATCAGGTCCGACTAGTCACACTTG---------------- 932
consensus_9987#3      ------------------------------------------------------------
consensus_9987#1      GAAAACGTCTTTTCAGCTGTGGTATTATCAGTGTCCCGACTAAGTACACTTGTTTACAGC 665
consensus_9987#2      ------------------------------------------------------------
                                                                                  

consensus_9987#0      -----------------
consensus_9987#3      -----------------
consensus_9987#1      TAAAAAAAAAAAAAAAA 682
consensus_9987#2      -----------------