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Schistosoma mansoni
cluster # 9990 cluster # 9990       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9990#0 length = 1107 sequences # 7  
consensus_9990#1 length = 898 sequences # 2  
consensus_9990#2 length = 780 sequences # 3  

consensusID : consensus_9990#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1107
fasta sequence
                              [CGCAATCAAATTAATCGCTCAACAAATCGGTGACCGTGATAGTGGAGTTCGATCAGCAGCTTTGAATGCTTTACTTTCTGCTTATGCTGTTATTGGTGAACAGATATGGAAGGTTATCGGCGATATACCTGAAAAAGAACGTTCAATGCTGGAAGAACGTATCAAACGAGCTGGGCAAGCACCAATCAATACTGTTGATAATTTTGAACCAAAGACGCCGTCTGTAAGACCGAGCACTGCAAGACGTGATCCATCAGATTCACGCAATCCTCTAGAGCCTGTTCCAAATGAATTTCGCCGTCAGCAACCGGTTTCTGCAGCTCATGCTAGAGCACGTGCTATGTTGAATGAACTAGGTGATTTATCACCTGAGAAAGCTCCAAGTATGCCTCCACTTATTCAGTTAGATGCTGATATAAATGATCTCTTTCAACCAGTTGAAATCCCAGCATTGAAAACACACGTGCGCCAGCCTGTTCTCAATGCACTGTTACGAACAAGTCCTGATACTGCTTCAGCGATCACATTGGTCGTAACGGCTATATCTTCTAATGATTTACTAATCAGTTGTCATGCTTTAGCCGAAATCGACACTGTTCTTCGAGATGAAAAGTGGTACCTTTTACTCAATCATGTCAATCAAGTCCTGATGCTTATTACAATGCAGTTA-CGTCAAGTTACTTCGAGATA-TTTTGGAGATCCTTCAGTTTCAGAGGAGCAGTTGCATACATTGATTCGGTCTCATTTGGCCACTATTGAATCTCTTTTTAGTCGTCCAACATTAGGTCGTGAAGCCTCACGGGAAACTTTAAGAGAATTATCCCAGTCTCTCCTTCAAATGATGTTGGATGAAAGGACTTCTGAAATGTCCAGTGGAGAAAATGTTATCAGATCAATCAATGCATTATTTGTTCTTATTTTGGAGGCTTCTAATGGAACACGTATACTCAGTGCGCTCATTCGGTTACTGCATGAGTGTGTCAGTAACGGACACTTTACAAACCGATTCACTCAAGCTATCCTCAAAAGTATATGGCGTATTACCAAGGGAATGAATACTGCATTTAATAATTACTCTGTGGATGTCATACTTCTGGACTGTCATCA]

[-] EMBL CD160222             [CGCAATCAAATTAATCGCTCAACAAATCGGTGACCGTGATAGTGGAGTTCGATCAGCAGCTTTGAATGCTTTACTTTCTGCTTATGCTGTTATTGGTGAACAGATATGGAAGGTTATCGGCGATATACCTGAAAAAGAACGTTCAATGCTGGAAGAACGTATCAAACGAGCTGGGCAAGCACCAATCAATACTGTTGATAATTTTGAACCAAAGACGCCGTCTGTAAGACCGAGCACTGCAAGACGTGATCCATCAGATTCACGCAATCCTCTAGAGCCTGTTCCAAATGAATTTCGCCGTCAGCAACCGGTTTCTGCAGCTCATGCTAGAGCACGTGCTATGTTGAATGAACTAGGTGATTTATCACCTGAGAAAGCTCCAAGTATGCCTCCACTTATTCAGTTAGATGCTGATATAAATGATCTCTTTCAACCAGTTGAAATCCCAGCATTGAAAACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD160332             [                            GGTGCCCGTGATAGTGGAGTTCGATCAGCAGCTTTGAATGCTTTACTTTCTGCTTATGCTGTTATTGGTGAACAGATATGGAAGGTTATCGGCGATATACCTGAAAAAGAACGTTCAATGCTGGAAGAACGTATCAAACGAGCTGGGCAAGCACCAATCAATACTGTTGATAATTTTGAACCAAAGACGCCGTCTGTAAGACCGAGCACTGCAAGACGTGATCCATCAGATTCACGCAATCCTCTAGAGCCTGTTCCAAATGAATTTCGCCGTCAGCAACCGGTTTCTGCAGCTCATGCTAGAGCACGTGCTATGTTGAATGAACTAGGTGATTTATCACCTGAGAAAGCTCCAAGTATGCCTCCACTTATTCAGTTAGATGCTGATATAAATGATCTCTTTCAACCAGTTGAAATCCCAGCATTGAAAACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD155386             [                                                                                                                                                                                                                                                                                                                                                                                                                         GCTGATATAAATGATCTCTTTCAACCAGTTGAAATCCCAGCATTGAAAACACACGTGCGCCAGCCTGTTCTCAATGCACTGTTACGAACAAGTCCTGATACTGCTTCAGCGATCACATTGGTCGTAACGGCTATATCTTCTAATGATTTACTAATCAGTTGTCATGCTTTAGCCGAAATCGACACTGTTCTTCGAGATGAAAAGTGGTACCTTTTACTCAATCATGTCAATCAAGTCCTGATGCTTATTACAATGCAGTTA CGTCAAGTTACTTCGAGATA TTTTGGAGATCCTTCAGTTTCAGAGGAGCAGTTGCATACATTGATTCGGTCTCATTTGGCCACTATTGAATCTCTTTTTAGTCGTCCAACATTAGGTCGTGAAGCCTCACGGGAAACTTTAAGAGAATTATCCCAGTCTCTCCTTCAAATGATGTTGGATGAAAGGACTTt                                                                                                                                                                                                                                                      ]
[+] EMBL CD159322             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACGTGCGCCAGCCTGTTCTCAATGCACTGTTACGAACAAGTCCTGATACTGCTTCAGCGATCACAATGGTCGTAGCGGCTATATCTTCTAATGATTTACTAATCAGTTGTCATGCTTTAGCCGAAATCGACACTGTTCTTCGAGATGAAAAGTGGTACCTTTTACTCAATCATGTCAATCAAGTCCTGATGCTTATTACAATGCAGTTA CGTCAAGTTACTTCGAGATA TTTTGGAGATCCTTCAGTTTCAGAGGAGCAGTTGCATACATTGATTCGGTCTCATTTGGCCACTATTGAATCTCTTTTTAGTCGTCCAACATTAGGTCGTGAAGCCTCACGGGAAACTTTAAGAGAATTATCCCAGTCTCTCCTTCAAATGATGTTGGATGAAAGGACCTCTGTAATGTCCAGTGGAGAAAATGTTATCAGATCAATCAATGCATTATTTGTTCTTATTTTGGAGGCTTCTAATGGAACACGTATACTCAGTGCGCTCATTCGGTTACTGCATGAGTGTGTCAGTAACGGACACTTTACAAACCGATTCACTCAAGCTATCCTCAAAAGTATATGGCGTATTACCAAGGGAATG                                                     ]
[-] EMBL CD145235             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGTTGTCATGCTTTAGCCGAAATCGACACTGTTCTTCGAGATGAAAAGTGGTACCTTTTACTCAATCATGTCAATCAAGTCCTGATGCTTATTACAATGCAGTTA CGTCAAGTTACTTCGAGATA TTTTGGGGATCCTTCAGTTTCAGAGGAGCAGTTGCATACATTGATTCGGTCTCATTTGGCCACTATTGAATCTCTTTTTAGTCGTCCAACATTAGGTCGTGAAGCCTCACGGGAAACTTTAAGAGAATTATCTCAGTCTCTCCTTCAAATGATGTTGGATGAAAGGACTTCTGAAATGTCCAGTGGAGAAAATGTTATCAGATCAATCAATGCATTATTTGTTCTTATTTTGGAGGCTTCTAATGGAACACGTATACTCAGTGCGCTCATTCGGTTACTGCATGAGTGTGTCAGTAACGGACACTTTACAAACCGATTCACTCAAGCTATCCTCAAAAGTATATGGCGTATTACCAAGGGGATGAATACTGCATTTAATAATTACTCTGTGGATGTCATACTTCTGGACTGTCATCA]
[+] EMBL BE505116             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GACACTGTTCTTCGAGATGAAAAGTGGTACCTTTTACTCAATCATGTCAATCAAGTCCTGATGCTTATTACAATGCNGTTACCGTCAAGTTACTTCGAGATATTTTTGGAGATCCTTCAGTTTCAGAGGAGCAGTTGCATACATTGATTCGGTCTCATTTGGCCACTATTGAATCTCTTTTTAGTCGTCCAACATTAGGTCGTGAAGCCTCACGGGNAACTTTAAGAGAATTATCCCAGTCTCTCCTTCAAATGATGTTGGATGAAAGGACTTCTGAAATGTCCAGTGG                                                                                                                                                                                                                                       ]
[+] EMBL CD114331             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGTACCTTTTACTCAATCATGTCAATCAAGTCCTGATGCTTATTACAATGCAGTTA CGTCAAGTTACTTCGAGATA TTTTGGAGATCCTTCAGTTTCAGAGGAGCAGTTGCATACATTGATTCGGTCTCATTTGG CACTATTGAATCTCTTTTTAGTCGTCCAACATTAGGTCGTGAAGCCTCACGGGAAACTTTAAGAGAATTATCCCAGTCTCTCCTTCAAATGATGTTGGATGAAAGGACTTCTGAAATGTCCAGTGGAGAAAATGTTATCAGATCAATCAATGCATTATTTGTTCTTATTTTGGAGGCTTCTAATGGAACACGTATACTCAGTGCGCTCATTCGGTTACTGCATGAGTGTGTCAGTAACGGACACTTTACAAACCGATTCACTCAAGCTACCCTCAt                                                                                 ]


>consensus_9990#0 CGCAATCAAATTAATCGCTCAACAAATCGGTGACCGTGATAGTGGAGTTCGATCAGCAGC TTTGAATGCTTTACTTTCTGCTTATGCTGTTATTGGTGAACAGATATGGAAGGTTATCGG CGATATACCTGAAAAAGAACGTTCAATGCTGGAAGAACGTATCAAACGAGCTGGGCAAGC ACCAATCAATACTGTTGATAATTTTGAACCAAAGACGCCGTCTGTAAGACCGAGCACTGC AAGACGTGATCCATCAGATTCACGCAATCCTCTAGAGCCTGTTCCAAATGAATTTCGCCG TCAGCAACCGGTTTCTGCAGCTCATGCTAGAGCACGTGCTATGTTGAATGAACTAGGTGA TTTATCACCTGAGAAAGCTCCAAGTATGCCTCCACTTATTCAGTTAGATGCTGATATAAA TGATCTCTTTCAACCAGTTGAAATCCCAGCATTGAAAACACACGTGCGCCAGCCTGTTCT CAATGCACTGTTACGAACAAGTCCTGATACTGCTTCAGCGATCACATTGGTCGTAACGGC TATATCTTCTAATGATTTACTAATCAGTTGTCATGCTTTAGCCGAAATCGACACTGTTCT TCGAGATGAAAAGTGGTACCTTTTACTCAATCATGTCAATCAAGTCCTGATGCTTATTAC AATGCAGTTACGTCAAGTTACTTCGAGATATTTTGGAGATCCTTCAGTTTCAGAGGAGCA GTTGCATACATTGATTCGGTCTCATTTGGCCACTATTGAATCTCTTTTTAGTCGTCCAAC ATTAGGTCGTGAAGCCTCACGGGAAACTTTAAGAGAATTATCCCAGTCTCTCCTTCAAAT GATGTTGGATGAAAGGACTTCTGAAATGTCCAGTGGAGAAAATGTTATCAGATCAATCAA TGCATTATTTGTTCTTATTTTGGAGGCTTCTAATGGAACACGTATACTCAGTGCGCTCAT TCGGTTACTGCATGAGTGTGTCAGTAACGGACACTTTACAAACCGATTCACTCAAGCTAT CCTCAAAAGTATATGGCGTATTACCAAGGGAATGAATACTGCATTTAATAATTACTCTGT GGATGTCATACTTCTGGACTGTCATCA



consensusID : consensus_9990#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 898
fasta sequence
                              [TAATTCGACCGGAGACATTGGTAAACCATTTGTTGGTTGAACATAATGAATTTTAGCTACCCACAGATTCCGGTTTACTTCTATGAAAGCTAAATTGTACGAAAAATTAACTTCAGACAATCTTAATGTCCCGATTTCTAGTTCCAACTAATAATAACGCAGATGAAGAATAAAATAAATACCTTTAAAAAACGTATCTCTATGCAAGGGAAATATGTGAGGAAGTGTTGGTCTAACGGTTTTTTTTCAAATAGCATCATTTAGCTTAAAATGACATTCAAGACCACTTGTGTGGCACAGAAATGCATCACGCTACCGCAAATTCAGGTTTCTAACCAAGTCAATATTGTAGCTTGCACCCGTTAAAGATATTCTATGCCATAAGCGGAGGACAGGTAGCTTAAAAACGTTTTTCTGTTCCAGACTTAATGGTATTTGGAGTTCCACACAGAGTGCGTGACTACTGATTGCAGTAAGTACAAACTTCGGTACTTACTTACTCCTGATACCCCACGTGAAGGAGCACCGGCCGTCCACCAGCATTCTCCATCGAACTCTGTCCTGGGAAATCCTATCCAGTCGCTATTCATCCTTTTGATGTCTGCTTCCAATCCTCTACGCAGTGTGTTCTTTGGTATTTCTCTTTTCTGTTTCCCTTCAAGACTCCAAGTTTGGGCTTGCTTCATAATGCAGTTTGATGATTTCCTCAATGTATGTCCTATCCACTTCTAACGTCTCTTCCTAATTTCCTCTTCAGTTGGAAGCTGGTTTGTTCTCTCCCACAGTAGGCTGCTGTCGATATATCCAACCAACGGGCATTGAGTATCTTGTTTAGACAATTGTTCATAAATACTTGTACGTTTTTGATGATGGTTGTGGTAGTTCTTCTAGCTTCAGC]

[+] EMBL CD129449             [TAATTCGACCGGAGACATTGGTAAACCATTTGTTGGTTGAACATAATGAATTTTAGCTACCCACAGATTCCGGTTTACTTCTATGAAAGCTAAATTGTACGAAAAATTAACTTCAGACAATCTTAATGTCCCGATTTCTAGTTCCAACTAATAATAACGCAGATGAAGAATAAAATAAATACCTTTAAAAAACGTATCTCTATGCAAGGGAAATATGTGAGGAAGTGTTGGTCTAACGGTTTTTTTTCAAATAGCATCATTTAGCTTAAAATGACATTCAAGACCACTTGTGTGGCACAGAAATGCATCACGCTACCGCAAATTCAGGTTTCTAACCAAGTCAATATTGTAGCTTGCACCCGTTAAAGATATTCTATGCCATAAGCGGAGGACAGGTAGCTTAAAAACGTTTTTCTGTTCCAGACTTAATGGTATTTGGAGTTCCACACAGAGTGCGTGACTACTGATTGCAGTAAGTACAAACTTCGGTACTTACTTACTCCTGATACCCCACGTGAAGGAGCACCGGCCGTCCACCAGCATTCTCCATCGAACTCTGTCCTGGGAAATCCTATCCAGTCGCTATTCATCCTTTTGATGTCTGCTTCCAATCCTCTACGCAGTGTGTTCTTTGGTATTTCT                                                                                                                                                                                                                                                                ]
[-] EMBL CD183349             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCAGTTGCTATTCATCCTTTTGATGTCTGCTTCCAATCCTCTACGCAGTGTGTTCTTTGGTATTTCTCTTTTCTGTTTCCCTTCAAGACTCCAAGTTTGGGCTTGCTTCATAATGCAGTTTGATGATTTCCTCAATGTATGTCCTATCCACTTCTAACGTCTCTTCCTAATTTCCTCTTCAGTTGGAAGCTGGTTTGTTCTCTCCCACAGTAGGCTGCTGTCGATATATCCAACCAACGGGCATTGAGTATCTTGTTTAGACAATTGTTCATAAATACTTGTACGTTTTTGATGATGGTTGTGGTAGTTCTTCTAGCTTCAGC]


>consensus_9990#1 TAATTCGACCGGAGACATTGGTAAACCATTTGTTGGTTGAACATAATGAATTTTAGCTAC CCACAGATTCCGGTTTACTTCTATGAAAGCTAAATTGTACGAAAAATTAACTTCAGACAA TCTTAATGTCCCGATTTCTAGTTCCAACTAATAATAACGCAGATGAAGAATAAAATAAAT ACCTTTAAAAAACGTATCTCTATGCAAGGGAAATATGTGAGGAAGTGTTGGTCTAACGGT TTTTTTTCAAATAGCATCATTTAGCTTAAAATGACATTCAAGACCACTTGTGTGGCACAG AAATGCATCACGCTACCGCAAATTCAGGTTTCTAACCAAGTCAATATTGTAGCTTGCACC CGTTAAAGATATTCTATGCCATAAGCGGAGGACAGGTAGCTTAAAAACGTTTTTCTGTTC CAGACTTAATGGTATTTGGAGTTCCACACAGAGTGCGTGACTACTGATTGCAGTAAGTAC AAACTTCGGTACTTACTTACTCCTGATACCCCACGTGAAGGAGCACCGGCCGTCCACCAG CATTCTCCATCGAACTCTGTCCTGGGAAATCCTATCCAGTCGCTATTCATCCTTTTGATG TCTGCTTCCAATCCTCTACGCAGTGTGTTCTTTGGTATTTCTCTTTTCTGTTTCCCTTCA AGACTCCAAGTTTGGGCTTGCTTCATAATGCAGTTTGATGATTTCCTCAATGTATGTCCT ATCCACTTCTAACGTCTCTTCCTAATTTCCTCTTCAGTTGGAAGCTGGTTTGTTCTCTCC CACAGTAGGCTGCTGTCGATATATCCAACCAACGGGCATTGAGTATCTTGTTTAGACAAT TGTTCATAAATACTTGTACGTTTTTGATGATGGTTGTGGTAGTTCTTCTAGCTTCAGC



consensusID : consensus_9990#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 780
fasta sequence
                              [ATACTCGGATCCTAAGCTAGTCTCGTAACCCCCAAGCTAAATCTACACATCGACTTGAACACGAGAGAAAAGGCGCAAAATATGCGAGAAACTCCAAAGGTTCATTTATGTACAGAAAATATAGGGTTTTTACAGTAATTTAGAAGTCCTTGGTTCTTCCTGAAAATTCTGCAATACTACAAAACATAGTAGCAGTGTAGTAATCAGCCGATCAGAGCCTCTACATATGAATTTTCACTTTCGTGATGTTTCGACCAAAACTTCTAATCAAACGCTGATTGGTTAAAATGCTTCTTAATATTTCCTGAGCATTTCTTGTCTATTACGAGAAATTTTCAAGATCGGCCCAACAGGGGCATAGGCCACCCACCAGCATTCTCCATTGAACTCTGTTCTGAACAATTGTTTCCGGTTGCTATTCATTCTTTCAATGTCTGCTTCCGATTCCAGGTTCAGTGTGTTCTTCGCTGTTCCTCTTTTCCGTTTCCCTCCAGGATCCTAAGTTAGCACTTGTCTCACGATACAGTTTGATGATTACCACAACGTATGTCCTATCCACTTCCATCGTCTTTTCCTAATTTCCTCTTCAGCTGAAAGCTGGTTTGTCCTCTCCCACAGTAGTCTGTCGTTGATGGTAGCCGGACGTCTGCATCAGATCCTCCTTGTTCATCGATGTTGCTGTTCAGGCACGTGAGAATCATCACCTCTTCCAGAGTTTCTCCATCAAGTGTAATTGATTTGGTGTTCACCGTGTTGTATTTGAGGATCTTGCTTCCTCCT]

[-] EMBL CD160619             [ATACTCGGATCCTAAGCTAGTCTCGTAACCCCCAAGCTAAATCTACACATCGACTTGAACACGAGAGAAAAGGCGCAAAATATGCGAGAAACTCCAAAGGTTCATTTATGTACAGAAAATATAGGGTTTTTACAGTAATTTAGAAGTCCTTGGTTCTTCCTGAAAATTCTGCAATACTACAAAACATAGTAGCAGTGTAGTAATCAGCCGATCAGAGCCTCTACATATGAATTTTCACTTTCGTGATGTTTCGACCAAAACTTCTAATCAAACGCTGATTGGTTAAAATGCTTCTTAATATTTCCTGAGCATTTCTTGTCTATTACGAGAAATTTTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD178398             [                                                                                                                                                                                                                                          TCACTTTCGTGATGTTTCGACCAAAACTTCTAATCAAACGCTGATTGGTTAAAATGCTTCTTAATATTTCCTGAGCATTTCTTGTCTATTACGAGAAATTTTCAAGATCGGCCCAACAGGGGCATAGGCCACCCACCAGCATTCTCCATTGAACTCTGTTCTGAACAATTGTTTCCGGTTGCTATTCATTCTTTCAATGTCTGCTTCCGATTCCAGGTTCAGTGTGTTCTTCGCTGTTCCTCTTTTCCGTTTCCCTCCAGGATCCTAAGTTAGCACTTGTCTCACGATACAGTTTGATGATTACCACAACGTATGTCCTATCCACTTCCATCGTCTTTTCCTAATTTCCTCTTCAGCTGAAAGCTGGT                                                                                                                                                                                  ]
[+] EMBL CD147322             [                                                                                                                                                                                                                                                                                                                                                                                      ATTCTCCATTGAACTCTGTTCTGAACAATTGTTTCCGGTTGCTATTCATTCTTTCAATGTCTGCTTCCGATTCCAGGTTCAGTGTGTTCTTCGCTGTTCCTCTTTTCCGTTTCCCTTCAGGATCCTAAGTTAGCACTTGTCTCACGATACAGTTTGATGATTACCACAACGTATGTCCTATCCACTTCCATCGTCTTTTCCTAATTTCCTCTTCAGCTGAAAGCTGGTTTGTCCTCTCCCACAGTAGTCTGTCGTTGATGGTAGCCGGACGTCTGCATCAGATCCTCCTTGTTCATCGATGTTGCTGTTCAGGCACGTGAGAATCATCACCTCTTCCAGAGTTTCTCCATCAAGTGTAATTGATTTGGTGTTCACCGTGTTGTATTTGAGGATCTTGCTTCCTCCT]


>consensus_9990#2 ATACTCGGATCCTAAGCTAGTCTCGTAACCCCCAAGCTAAATCTACACATCGACTTGAAC ACGAGAGAAAAGGCGCAAAATATGCGAGAAACTCCAAAGGTTCATTTATGTACAGAAAAT ATAGGGTTTTTACAGTAATTTAGAAGTCCTTGGTTCTTCCTGAAAATTCTGCAATACTAC AAAACATAGTAGCAGTGTAGTAATCAGCCGATCAGAGCCTCTACATATGAATTTTCACTT TCGTGATGTTTCGACCAAAACTTCTAATCAAACGCTGATTGGTTAAAATGCTTCTTAATA TTTCCTGAGCATTTCTTGTCTATTACGAGAAATTTTCAAGATCGGCCCAACAGGGGCATA GGCCACCCACCAGCATTCTCCATTGAACTCTGTTCTGAACAATTGTTTCCGGTTGCTATT CATTCTTTCAATGTCTGCTTCCGATTCCAGGTTCAGTGTGTTCTTCGCTGTTCCTCTTTT CCGTTTCCCTCCAGGATCCTAAGTTAGCACTTGTCTCACGATACAGTTTGATGATTACCA CAACGTATGTCCTATCCACTTCCATCGTCTTTTCCTAATTTCCTCTTCAGCTGAAAGCTG GTTTGTCCTCTCCCACAGTAGTCTGTCGTTGATGGTAGCCGGACGTCTGCATCAGATCCT CCTTGTTCATCGATGTTGCTGTTCAGGCACGTGAGAATCATCACCTCTTCCAGAGTTTCT CCATCAAGTGTAATTGATTTGGTGTTCACCGTGTTGTATTTGAGGATCTTGCTTCCTCCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9990#1      ------TAATTCGACCGGAGACATTGGTAAACCATTTGTTGGTTGAACATAATGAATT-T 53
consensus_9990#2      ------------------------------------------------------------
consensus_9990#0      CGCAATCAAATTAATCGCTCAACAAATCGGTGACCGTGATAGTGGAGTTCGATCAGCAGC 60
                                                                                  

consensus_9990#1      TAGCTACCCACAGATTCCGGTTTACTTCTATGAAAGCTAAATTGTACGAAAAATTAACTT 113
consensus_9990#2      ------------------------------------------------------------
consensus_9990#0      TTTGAATGCTTTACTTTCTGCTTATGCTGTTATTGGTGAACAGATATGGAAGGTTATCGG 120
                                                                                  

consensus_9990#1      CAGACAATCTTAATGTCCCGATTTCTAGTTCCAACTAATAATAACGCAGATGAAGAATAA 173
consensus_9990#2      --------------------ATACTCGGATCCTAA-GCTAGTCTCGTAACCCCCAAGCTA 39
consensus_9990#0      CGATATACCTGAAAAAG--AACGTTCAATGCTGGAAGAACGTATCAAACGAGCTGGGCAA 178
                                          *         *          *  *  *           *

consensus_9990#1      -----AATAAATACCTTTAAA-AAACGTATCTCTATGCAAGGGAAATATGTGAGGAAGTG 227
consensus_9990#2      -----AATCTACACATCGACTTGAACACGAGAGAAAAGGCGCAAAATATGCGAGAAAC-- 92
consensus_9990#0      GCACCAATCAATACTGTTGAT--AATTTTGAACCAAAGACGCCGTCTGTAAGACCGAGCA 236
                           ***  * **         **         *     *     * *  **   *   

consensus_9990#1      TTGGTCTAACGGTTTTTTTTCAAATAGCAT-CATTTAGCTTAAAATGACATTCAAGACCA 286
consensus_9990#2      ----TCCAAAGGTTCATTTATGTACAGAAAATATAGGGTTTTTACAGTAATTTAGAAGTC 148
consensus_9990#0      C---TGCAAGACGTGATCCATCAGATTCACGCA-ATCCTCTAGAGCCTGTTCCAAATGAA 292
                          *  **    *  *           *   *       *  *      *  *      

consensus_9990#1      CTTGTGTGGCACAGAAATGCA-TCACGCTAC-CGCAAATTCAGGTTTCTAACCAAGTCAA 344
consensus_9990#2      CTTGGTTCTTCCTGAAA-ATT-CTGCAATAC-TACAAAA-CATAGTAGCAGTGTAGTAAT 204
consensus_9990#0      TTTCGCCGTCAGCAACCGGTTTCTGCAGCTCATGCTAGAGCACGTGCTATGTTGAATGAA 352
                       **           *          *    *   * *   **            * * * 

consensus_9990#1      TATTGTAGCTTGCACCCG-------TTAAAGATATTCTATGCCATAAGCGGAGGACAGGT 397
consensus_9990#2      CA--GCCGATCAGAGCCT-------CTACATATGAATTTTCACTTTCGTG----ATGTTT 251
consensus_9990#0      CTAGGTGATTTATCACCTGAGAAAGCTCCAAGTATGCCTCCACTTATTCAGTT-AGATGC 411
                          *    *     **         *  *  *         * *         *     

consensus_9990#1      AGCTTAAAAACGTTTTTCTGTTCCAGACTTAATGGTAT--TTGGAGTTCCACACAGAGTG 455
consensus_9990#2      CGACCAAAA-----CTTCTAATCAAACGCTGAT--TGG--TTAAAATGCTTCTTA----- 297
consensus_9990#0      TGATATAAATGATCTCTTTCAACCAGTTGAAATCCCAGCATTGAAAACACACGTGC-GCC 470
                       *    ***       * *   * *      **       **  *      *        

consensus_9990#1      CGTGACTACTGATTGCA---GTAAGTACAAACTTCGGTACTTACTTACTCCTGATACCCC 512
consensus_9990#2      -ATATTTCCTGA--GCA---TTTCTTGTCTATTACGAGAAATTTTCAAGATCGG--CCCA 349
consensus_9990#0      AGCCTGTTCTCAATGCACTGTTACGAACAAGTCCTGATACTGCTTCAG---CGA--TCAC 525
                            * ** *  ***    *             *  *     * *     *    *  

consensus_9990#1      ACGTGAAGGAGCACCGGCCGTCCACCAGCATTCTCCATCGAACT-CTGTCCTGGGAAATC 571
consensus_9990#2      AC----AGGGGCATAGGCCACCCACCAGCATTCTCCATTGAACT-CTGTTCTGAACAATT 404
consensus_9990#0      AT---TGGTCGTAACGGCTATATCTTCTAATGATTTACTAATCAGTTGTCATGCTTTAGC 582
                      *      *  * *  ***           **  *  *   * *   ***  **    *  

consensus_9990#1      CTATCCAGTCGCTATTCATCCTTTTGATGTCTGCTTCCAATCCTCTACGCA-GTGTGTTC 630
consensus_9990#2      GTTTCCGGTTGCTATTCATTCTTTCAATGTCTGCTTCCGATTCCAGGTTCA-GTGTGTTC 463
consensus_9990#0      CGAAATCGACACTGTTCTTCGAGATGAAAAGTGGTACCTTTTACTCAATCATGTCAATCA 642
                             *   ** *** *       *    ** * **  *        ** **   *  

consensus_9990#1      TTTGGTATTTCTCTTTTCTGTTTCCCTTCAAGACTCCAAGTTTGGGCTTGCTTCATAA-- 688
consensus_9990#2      TTCGCTGTTCCTCTTTTCCGTTTCCCTCCAGGATCCTAAGTTAGCACTTGTCTCACGA-- 521
consensus_9990#0      AGTCCTGATGCTTATTACAATGCAGTTACGTCAAGTTACTTCGAGATATTTTGGAGATCC 702
                           *  * **  ** *  *     * *   *    *  *       *     *     

consensus_9990#1      TGCAGTTTGATGATTTCCTCAATGTATGTCCTATCCACTTCTAACGTCTCTTCCTAATTT 748
consensus_9990#2      TACAGTTTGATGATTACCACAACGTATGTCCTATCCACTTCCATCGTCTTTTCCTAATTT 581
consensus_9990#0      TTCAGTTTCAGAGGAGCAGTTGCATACATTGATTCGGTCTCATTTGGCCACTATTGAATC 762
                      * ****** *      *       **  *    **    **    * *   *  * * * 

consensus_9990#1      CCTCTTCAGTTG---GAAGCTGGTTTGTTCTCTCCCACAGTAGGCTGCTGTCGATA-TAT 804
consensus_9990#2      CCTCTTCAGCTG---AAAGCTGGTTTGTCCTCTCCCACAGTAGTCTGTCGTTGATGGTAG 638
consensus_9990#0      TCTTTTTAGTCGTCCAACATTAGGTCGTGAAGCCTCACGGGAAACTTTAAGAGA-ATTAT 821
                       ** ** **  *    *   * * * **     * *** * *  **      **   ** 

consensus_9990#1      CCAACCAACGGGCATTGAGTAT--CTTGTTTA--GACAAT------TGTTCA------TA 848
consensus_9990#2      CCGGACGTCTG-CATCAGATCCTCCTTGTTCATCGATGTTGC----TGTTCAGGCACGTG 693
consensus_9990#0      CCCAGTCTCTC-CTTCAAATGATGTTGGATGAAAGGACTTCTGAAATGTCCAG---TGGA 877
                      **      *   * *    *     * * * *  *    *      *** **        

consensus_9990#1      AATACTTGTACGTTTTTGATGATGGTTGTGGTAGTTCTTCTAGCTTCAGC---------- 898
consensus_9990#2      AGAATCATCACCTCTTCCAGAGTTTCTCCATCAAGTGTAATTGATTTGGTGTTCACCGTG 753
consensus_9990#0      GAAAATGTTATCAGATCAATCAATGCATTATTTGTTCTTATTTTGGAGGCTTCTAATGGA 937
                         *     *     *  *                * *  *       *           

consensus_9990#1      ------------------------------------------------------------
consensus_9990#2      TTGTATTTGAGGATCTTGCTTCCTCCT--------------------------------- 780
consensus_9990#0      ACACGTATACTCAGTGCGCTCATTCGGTTACTGCATGAGTGTGTCAGTAACGGACACTTT 997
                                                                                  

consensus_9990#1      ------------------------------------------------------------
consensus_9990#2      ------------------------------------------------------------
consensus_9990#0      ACAAACCGATTCACTCAAGCTATCCTCAAAAGTATATGGCGTATTACCAAGGGAATGAAT 1057
                                                                                  

consensus_9990#1      --------------------------------------------------
consensus_9990#2      --------------------------------------------------
consensus_9990#0      ACTGCATTTAATAATTACTCTGTGGATGTCATACTTCTGGACTGTCATCA 1107
                                                                        




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)