cluster # 9991

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Schistosoma mansoni
cluster # 9991 cluster # 9991 Sequences # 12 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9991#0 length = 1019 sequences # 7
consensus_9991#1 length = 547 sequences # 1

consensus_9991#2 length = 493 sequences # 3
consensus_9991#3 length = 367 sequences # 1

consensusID : consensus_9991#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1019
fasta sequence

                              [CTGACACATTCATCTCGTTTATTAGCCCAGATAGGAGATACTGGAGTGATAGCTGTTCTTTCTCAAGTTATTGAAGATCTCATTCATGGTGAAATGATGCAGCTTGCACCCAACAGCGATGATGATGACAAAAGGTTTCAAACCTATTTGACGAAAACCTACCGAAAAACAGCGAGTCTTATTGCTAACAGTTGTAAAGCAGTTGCTATGTTGACTGTCCCAACGCTATCACAGTGGCACATTGATAATATGTACGAATTTGGAAAACATTTGGGAATGGCATTTCAATTAATCGATGATGTGTT-GGACTTTGTATCTGATGAGGCGAATCTGGGCAAACCTACTGGGGCAGATCTACAAATGGGTCTTGCAACGGGACCCGTGTTGTTTGCTGCTCAAAGATATCCTGAACTAAACGCCATACTGCTGCGGCAATTCAGTTTAGATGGTGATACTGAAAGGGCTTTAGAATTAGTTAAACAGTCAGATGGAGTTGGTCAAACTCGGATGTTAGCTGAATTTCATTTCCAGGCAGCTCAACGATGTTTATTTCAATTCAGGGATTCTTTATCAAGAAAGGCTCTTCTACATGTTGCAGCGAATTTCCTACAACGTGGTCGATAAAATCGTATTTCCTCTAGTCAAATCTTATTCTACCTCTCTTTCTGTCCGTCTATTTAGCCTTAACCTTACCTTAATTTTACCTGTTTCTTTCTCTTAATTTACATTCACAATACCTAAAGAATGGTACATTACACTTAACTGATAGATAGTTATTCTAATTTGTATTTTCAGTTCATTATTATTACTTTTTTACCTAGTTTATATATTAATATGCAGAAAAAGAAACTTCCGCAATTTG-TTAAATAATTTGCCTTTGTTGATATATTAGTACTAGTCTGTAATTTATTTACATAACTGCTTAACCAGATCGCTATTTTTGAGAACTTATCTTTCAGCGTTTGTTCATAGAAATAGTACATGTGAAATATATATCTGTTGTAAAAAAAAAAAAAAAA]

[+] EMBL CD095639             [CTGACACATTCATCTCGTTTATTAGCCCAGATAGGAGATACTGGAGTGATAGCTGTTCTTTCTCAAGTTATTGAAGATCTCATTCATGGTGAAATGATGCAGCTTGCACCCAACAGCGATGATGATGACAAAAGGTTTCAAACCTATTTGACGAAAACCTACCGAAAAACAGCGAGTCTTATTGCTAACAGTTGTAAAGCAGTTGCTATGTTGACTGTCCCAACGCTATCACAGTGGCACATTGATAATATGTACGAATTTGGAAAACATTTGGGAATGGCATTTCAATTAATCGATGATGTGTT GGACTTTGTATCTGATGAGGCGAATCTGGGCAAACCTACTGGGGCAGATCTACAAATGGGTCTTGCAACGGGACCCGTGTTGTTTGCTGCTCAAAGATATCCTGAACTAAACGCCATACTGCTGCGGCAATTCAGTTTAGATGGTGATACTGAAAGGGCTTTAGAATTAGTTAAACAGTCAGATGGAGTTGGTCAAACTCGGATGTTAGCTGAATTTCATTTCCAGGCAGCTCAGCGATGTTTATTTCAATTCAGGGATTCTTTATCAAGAAAGGCTCTTCTACATGTTGCAGCGAATTTCCT                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AA559804             [                GTTTATTAGCCCAGATAGGAGATACTGGAGTGATAGCTGTTCTTTCTCAAGTTATTGAAGATCTCATTCATGGTGAAATGATGCAGCTTGCACCCAACAGCGATGATGATGACAAAAGGTTTCAAACCTATTTGACGAAAACCTACCGAAAAACAGCGAGTCTTATTGCTAACAGTTGTAAAGCAGTTGCTATGTTGACTGTCCCAACGCTATCACAGTGGCACATTGATAATATGTACGAATTTGGAAAACATTTGGGAATGGCATTTCAATTAATCGATGATGTGTTGGGACTTTGTAac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD098457             [                                                                                                                                                                                                                                                                                                                                                                                                 TTGTTTGCTGCTCAAAGATATCCTGAAGTAAACGCCATACTGCTGCGGCAATTCAGTTTAGATGGTGATACTGAAAGGGCTTTAGAATTAGTTAAACAGTCAGATGGAGTTGGTCAAACTCGGATGTTAGCTGAATTTCATTTCCAGGCAGCTCAACGATGTTTATTTCAATTCAGGGATTCTTTATCAAGAAAGGCTCTTCTACATGTTGCAGCGAATTTCCTACAACGTGGTCGATAAAATCGTATTTCCTCTAGTCAAATCTTATTCTACCTCTCTTTCTGTCCGTCTATTTAGCCTTAACCTTACCTTAATTTTACCTGTTTCTTTCTCTTAATTTACATTCACAATACCTAAAGAATGGTACATTACACTTAACTGATAGATAGTTATTCTAATTTGTATTTTCAGTTCATTATTATT                                                                                                                                                                                                                     ]
[-] EMBL CD077183             [                                                                                                                                                                                                                                                                                                                                                                                                                               AACGCCATACTGCTGCGGCAATTCAGTTTAGATGGTGATACTGAAAGGGCTTTAGAATTAGTTAAACAGTCAGATGGAGTTGGTCAAACTCGGATGTTAGCTGAATTTCATTTCCAGGCGGCTCAACGATGTTTATTTCAATTCAGGGATTCTTTATCAAGAAAGGCTCTTCTACATGTTGCAGCGAATTTCCTACAACGTGGTCGATAAAATCGTATTTCCTCTAGTCAAATCTTATTCTACCTCTCTTTCTGTCCGTCTATTTAGCCTTAATCTTACCTTAATTTTACCTGTTTCTTTCTCTTAATTTACATTCACAATACCTAAAGAATGGTACATTACACTTAACTGATAGATAGTTATTCTAATTTGTATTTTCAGTTCATTATTATTACTTTTTTACCTAGTTTATATATTAATATGCAGAAAAAGAAACTTCCGCAATTTGTTTAAATAATTTGCCTTTGTTGATATATTAGTACTAGTCTGTAATTTATTTACATAACTGCTTAACCAGATCGCTATTTTTGAGAACTTATCTTTCAGCGTTTGTTCATAGAAATAGTACATGTGAAATATAT                         ]
[-] EMBL AI395741             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTTAATTTTACCTGTTTCTTTCTCTTAATTTACATTCACAATACCTAAAGATTGGTACATTACACTTAACTGATAGATAGTTATTCTAATTTGTATTTTCAGTTCATTATTATTACTTTTTTACCTAGTTTATATATTAATATGCAGAAAAAGAAACTTCCGCAATTTGTTTAAATAATTTGCCTTTGTTGATATATTAGTACTAGTCTGTAATTTATTTACATAACTGCTTAACCAGATCGCTATTTTTGAGAACTTATCTTTCAGCGTTTGTTCATAGAAATAGTACATGTAAAATATATATCTGTTGTAAAAAAAAAAAAAAAA]
[-] EMBL CD087037             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TAATTTNACCTGTTTCTTTCTCTTAATTTACATTCACAATACCTAAAGAATGGTACATTACACTTAACTGATAGATAGTTATTCTAATTTGTATTTTCAGTTCATTATTATT                                                                                                                                                                                                                     ]
[-] EMBL CD187819             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATTCACAATACCTAAAGAATGGTACATTACACTTAACTGATAGATAGTTATTCTAATTTGTATTTTCAGTTCATTATTATTACTTTTTTACCTAGTTTATATATTAATATGCAGAAAAAGAAACTTCCGCAATTTG TTAAATAATTTc                                                                                                                                                 ]




>consensus_9991#0
CTGACACATTCATCTCGTTTATTAGCCCAGATAGGAGATACTGGAGTGATAGCTGTTCTT
TCTCAAGTTATTGAAGATCTCATTCATGGTGAAATGATGCAGCTTGCACCCAACAGCGAT
GATGATGACAAAAGGTTTCAAACCTATTTGACGAAAACCTACCGAAAAACAGCGAGTCTT
ATTGCTAACAGTTGTAAAGCAGTTGCTATGTTGACTGTCCCAACGCTATCACAGTGGCAC
ATTGATAATATGTACGAATTTGGAAAACATTTGGGAATGGCATTTCAATTAATCGATGAT
GTGTTGGACTTTGTATCTGATGAGGCGAATCTGGGCAAACCTACTGGGGCAGATCTACAA
ATGGGTCTTGCAACGGGACCCGTGTTGTTTGCTGCTCAAAGATATCCTGAACTAAACGCC
ATACTGCTGCGGCAATTCAGTTTAGATGGTGATACTGAAAGGGCTTTAGAATTAGTTAAA
CAGTCAGATGGAGTTGGTCAAACTCGGATGTTAGCTGAATTTCATTTCCAGGCAGCTCAA
CGATGTTTATTTCAATTCAGGGATTCTTTATCAAGAAAGGCTCTTCTACATGTTGCAGCG
AATTTCCTACAACGTGGTCGATAAAATCGTATTTCCTCTAGTCAAATCTTATTCTACCTC
TCTTTCTGTCCGTCTATTTAGCCTTAACCTTACCTTAATTTTACCTGTTTCTTTCTCTTA
ATTTACATTCACAATACCTAAAGAATGGTACATTACACTTAACTGATAGATAGTTATTCT
AATTTGTATTTTCAGTTCATTATTATTACTTTTTTACCTAGTTTATATATTAATATGCAG
AAAAAGAAACTTCCGCAATTTGTTAAATAATTTGCCTTTGTTGATATATTAGTACTAGTC
TGTAATTTATTTACATAACTGCTTAACCAGATCGCTATTTTTGAGAACTTATCTTTCAGC
GTTTGTTCATAGAAATAGTACATGTGAAATATATATCTGTTGTAAAAAAAAAAAAAAAA

consensusID : consensus_9991#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 547
fasta sequence

                              [TACAAACTATGTCTGTTTGGTTTTCAGTACTGACCTGAAAAAAATCTACTGATAAGCAAAATTGGGATTTATCATTGAATGGTAAAGCTGTAGTTAAGACGGTTGCTATGTTGACTGTCCCAACGCTATCACAGTGGCACATTGATAATATGTACGAATTTGGAGAACATTTGGGAATGGCATTTCAATTAATCGATGATGTGTTGGACTTTGTAACTGATGAGGCGAATCTGGGCAAACCTACTGGGGCAGATCTACAAATGGGTCTTGCAACGGGACCCGTGTTGTTTGCTGCTCAAAGATATCCTGAAGTAAACGCCATACTGCTGCGGCAATTCAGTTTAGATGGTGATACTGAAAGGGCTTTAGAATTAGTTAAACAGTCAGATGGAGTTGGTCAAACTCGGATGTTAGCTGAATTTCATTTCCAGGCAGCTCAACGATGTTTATTTCAATTCAGGGATTCTTTATCAAGAAAGGCTCTTCTACATGTTGCAGCGAATTTCCTACAACGTGGTCGATAAAATCGTATTTCCTCTAGTCAAAT]

[-] EMBL CD197904             [TACAAACTATGTCTGTTTGGTTTTCAGTACTGACCTGAAAAAAATCTACTGATAAGCAAAATTGGGATTTATCATTGAATGGTAAAGCTGTAGTTAAGACGGTTGCTATGTTGACTGTCCCAACGCTATCACAGTGGCACATTGATAATATGTACGAATTTGGAGAACATTTGGGAATGGCATTTCAATTAATCGATGATGTGTTGGACTTTGTAACTGATGAGGCGAATCTGGGCAAACCTACTGGGGCAGATCTACAAATGGGTCTTGCAACGGGACCCGTGTTGTTTGCTGCTCAAAGATATCCTGAAGTAAACGCCATACTGCTGCGGCAATTCAGTTTAGATGGTGATACTGAAAGGGCTTTAGAATTAGTTAAACAGTCAGATGGAGTTGGTCAAACTCGGATGTTAGCTGAATTTCATTTCCAGGCAGCTCAACGATGTTTATTTCAATTCAGGGATTCTTTATCAAGAAAGGCTCTTCTACATGTTGCAGCGAATTTCCTACAACGTGGTCGATAAAATCGTATTTCCTCTAGTCAAAT]




>consensus_9991#1
TACAAACTATGTCTGTTTGGTTTTCAGTACTGACCTGAAAAAAATCTACTGATAAGCAAA
ATTGGGATTTATCATTGAATGGTAAAGCTGTAGTTAAGACGGTTGCTATGTTGACTGTCC
CAACGCTATCACAGTGGCACATTGATAATATGTACGAATTTGGAGAACATTTGGGAATGG
CATTTCAATTAATCGATGATGTGTTGGACTTTGTAACTGATGAGGCGAATCTGGGCAAAC
CTACTGGGGCAGATCTACAAATGGGTCTTGCAACGGGACCCGTGTTGTTTGCTGCTCAAA
GATATCCTGAAGTAAACGCCATACTGCTGCGGCAATTCAGTTTAGATGGTGATACTGAAA
GGGCTTTAGAATTAGTTAAACAGTCAGATGGAGTTGGTCAAACTCGGATGTTAGCTGAAT
TTCATTTCCAGGCAGCTCAACGATGTTTATTTCAATTCAGGGATTCTTTATCAAGAAAGG
CTCTTCTACATGTTGCAGCGAATTTCCTACAACGTGGTCGATAAAATCGTATTTCCTCTA
GTCAAAT

consensusID : consensus_9991#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 493
fasta sequence

                              [TGAGACTAGGTAGGTTGCTATGTTGACTGTTCCAACGCTATCACAGTGGCACATTGCTAATATGTACGAATTCGGAGAACATTTGGGAATGGCATTTCAATTAATCGATGATGTGTTGGACTTTGTAACTGATGAGGCGAATCTGGGCAAACCTACTGGGGCAGATCTACAAATGGGTCTTGCAACGGGACCCGTGTTGTTTGCTGCTCAAAGATATCCTGAAGTAAACGCCATACTGCTGCGGCAATTCAGTTTAGATGGTGATACTGAAAGGGCTTTAGAATTAGTTAAACAGTCAGATGGAGTTGGTCAAACTCGGATGTTAGCTGAATTTCATTTCCAGGCAGCTCAACGATGTTTATTTCAATTCAGGGATTCTTTATCAAGAAAGGCTCTTCTACATGTTGCAGCGAATTTCCTACAACGTGGTCGATAAAATCGTATTTCCTCTAGTCAAATCTTATTCTACCTCTCTTTCTGTCCGTCTATTTAG]

[+] EMBL CD127985             [TGAGACTAGGTAGGTTGCTATGTTGACTGTTCCAACGCTATCACAGTGGCACATTGCTAATATGTACGAATTCGGAGAACATTTGGGAATGGCATTTCAATTAATCGATGATGTGTTGGACTTTGTAACTGATGAGGCGAATCTGGGCAAACCTACTGGGGCAGATCTACAAATGGGTCTTGCAACGGGACCCGTGTTGTTTGCTGCTCAAAGATATCCTGAAGTAAACGCCATACTGCTGCGGCAATTCAGTTTAGATGGTGATACTGAAAGGGCTTTAGAATTAGTTAAACAGTCAGATGGAGTTGGTCAAACTCGGATGTTAGCTGAATTTCATTTCCAGGCAGCTCAACGATGTTTATTTCAATTCAGGGATTCTTTATCAAGAAAGGCTCTTCTACATGTTGCAGCGAATTTCCTACAACGTGGTCGATAAAATCGTATTTCCTCTAGTCAAATCTTATTCTACCTCTCTTTCTGTCCGTCTATTTAG]
[-] EMBL CD122838             [                                                                                              TTTCAATTAATCGATGATGTGTTGGACTTTGTAACTGATGAGGCGAATCTGGGCAAACCTACTGGGGCAGATCTACAAATGGGTCTTGCAACGGGACCCGTGTTGTTTGCTGCTCAAAGATATCCTGAAGTAAACGCCATACTGCTGCGGCAATTCAGTTTAGATGGTGATACTGAAAGGGCTTTAGAATTAGTTAAACAGTCAGATGGAGTTGGTCAAACTCGGATGTTAGCTGAATTTCATTTC                                                                                                                                                         ]
[+] EMBL CD065372             [                                                                                                                                                                                                                                                                                                     aggtAGGTGGAGTTGGTCAAACTCGGATGCTAGCTGAATTTCATTTCCAGGCAGCTCAACGATGTTTATTTCAATTCAGGGATTCTTTATCAAGAAGGGCTCTTCTACATGTTGCAGCGAATTTCCTACAACGTGGTCGATAAAATCGTATTTCCTCTAGTCAAATCTTATTCTACCT                      ]




>consensus_9991#2
TGAGACTAGGTAGGTTGCTATGTTGACTGTTCCAACGCTATCACAGTGGCACATTGCTAA
TATGTACGAATTCGGAGAACATTTGGGAATGGCATTTCAATTAATCGATGATGTGTTGGA
CTTTGTAACTGATGAGGCGAATCTGGGCAAACCTACTGGGGCAGATCTACAAATGGGTCT
TGCAACGGGACCCGTGTTGTTTGCTGCTCAAAGATATCCTGAAGTAAACGCCATACTGCT
GCGGCAATTCAGTTTAGATGGTGATACTGAAAGGGCTTTAGAATTAGTTAAACAGTCAGA
TGGAGTTGGTCAAACTCGGATGTTAGCTGAATTTCATTTCCAGGCAGCTCAACGATGTTT
ATTTCAATTCAGGGATTCTTTATCAAGAAAGGCTCTTCTACATGTTGCAGCGAATTTCCT
ACAACGTGGTCGATAAAATCGTATTTCCTCTAGTCAAATCTTATTCTACCTCTCTTTCTG
TCCGTCTATTTAG

consensusID : consensus_9991#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 367
fasta sequence

                              [TGTCTGTTTGGTTTTCAGTACTGACTTGAAAAAAATCTACTGATAAGCAAAATTGAGATTAAACCGAATTGTGTATGATGAGTTGTTATCAGTAAATGTCATAGCCCACATATCTCCCAGTCTTCGTATCATCTGAAGTTATAGGGAATAATTGACAGGTCTTGTGTATATCTTTGTGGTTATTGTGAAAGGTTTAATTTCTATCCCTTGGCTAGACTAATCATTTTCTTTTAGGTTGCTATGTTGACTGTCCCAACGCTATCACAGTGGCACATTGATAATATGTACGAATTTGGAGAACATTTGGGAATGGCATCTCAATTAATCGATGATGTGTTGGACTTTGTAACTGATGAGGCGAATCTGG]

[-] EMBL CD189404             [TGTCTGTTTGGTTTTCAGTACTGACTTGAAAAAAATCTACTGATAAGCAAAATTGAGATTAAACCGAATTGTGTATGATGAGTTGTTATCAGTAAATGTCATAGCCCACATATCTCCCAGTCTTCGTATCATCTGAAGTTATAGGGAATAATTGACAGGTCTTGTGTATATCTTTGTGGTTATTGTGAAAGGTTTAATTTCTATCCCTTGGCTAGACTAATCATTTTCTTTTAGGTTGCTATGTTGACTGTCCCAACGCTATCACAGTGGCACATTGATAATATGTACGAATTTGGAGAACATTTGGGAATGGCATCTCAATTAATCGATGATGTGTTGGACTTTGTAACTGATGAGGCGAATCTGG]




>consensus_9991#3
TGTCTGTTTGGTTTTCAGTACTGACTTGAAAAAAATCTACTGATAAGCAAAATTGAGATT
AAACCGAATTGTGTATGATGAGTTGTTATCAGTAAATGTCATAGCCCACATATCTCCCAG
TCTTCGTATCATCTGAAGTTATAGGGAATAATTGACAGGTCTTGTGTATATCTTTGTGGT
TATTGTGAAAGGTTTAATTTCTATCCCTTGGCTAGACTAATCATTTTCTTTTAGGTTGCT
ATGTTGACTGTCCCAACGCTATCACAGTGGCACATTGATAATATGTACGAATTTGGAGAA
CATTTGGGAATGGCATCTCAATTAATCGATGATGTGTTGGACTTTGTAACTGATGAGGCG
AATCTGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9991#0      CTGACACATTCATCTCGTTTATTAGCCCAGATAGGAGATACTGGAGTGATAGCTGTTCTT 60
consensus_9991#2      ------------------------------------------------------------
consensus_9991#1      ------------------------------------------------------------
consensus_9991#3      ------------------------------------------------------------
                                                                                  

consensus_9991#0      TCTCAAGTTATTGAAGATCTCATTCATGGTGAAATGATGCAGCTTGCACCCAACAGCGAT 120
consensus_9991#2      ------------------------------------------------------------
consensus_9991#1      ------------------------------------------TACAAACTATGTCTGTTT 18
consensus_9991#3      ------------------------------------------------------------
                                                                                  

consensus_9991#0      GATGATGACAAAAGGTTTCAAACCTATTTGACGAAAACCTACCGAAAAACAGCGAGTCTT 180
consensus_9991#2      ------------------------------------------------------------
consensus_9991#1      GGTTTTCAGTACTGACCTGAAAAAAATCTACTGATAAGCAAAATTGGGATTTATCATTGA 78
consensus_9991#3      ------------------------------------------------------------
                                                                                  

consensus_9991#0      ATTGCTAA--CAGTTGTAAAGCAGTTGCTATGTTGACTGTCCCAACGCTATCACAGTGGC 238
consensus_9991#2      ----------TGAGACTAGGTAGGTTGCTATGTTGACTGTTCCAACGCTATCACAGTGGC 50
consensus_9991#1      ATGGTAAAGCTGTAGTTAAGACGGTTGCTATGTTGACTGTCCCAACGCTATCACAGTGGC 138
consensus_9991#3      --------------------------------------------------------TGTC 4
                                                                              ** *

consensus_9991#0      ACATTGATAATATGTACGAATTTGGAAAACATTTGGGAATGGCATTTCAATTAATCGATG 298
consensus_9991#2      ACATTGCTAATATGTACGAATTCGGAGAACATTTGGGAATGGCATTTCAATTAATCGATG 110
consensus_9991#1      ACATTGATAATATGTACGAATTTGGAGAACATTTGGGAATGGCATTTCAATTAATCGATG 198
consensus_9991#3      TGTTTGGTTTTCAGTACTGACTTGAAAAAAATCTACTGATAA----GCAA--AATTGAGA 58
                         *** *  *  ****  * * * * ** ** *    **       ***  *** **  

consensus_9991#0      ATGTGTTGGACTTTGTATCTGATGAGGCGAATCTGGGCAAACCTACTGGGGCAGATCTAC 358
consensus_9991#2      ATGTGTTGGACTTTGTAACTGATGAGGCGAATCTGGGCAAACCTACTGGGGCAGATCTAC 170
consensus_9991#1      ATGTGTTGGACTTTGTAACTGATGAGGCGAATCTGGGCAAACCTACTGGGGCAGATCTAC 258
consensus_9991#3      TTAAACCGAATTGTGTA--TGATGAGTTGT-TATCAGTAAATGTCATAGCCCACAT---- 111
                       *     * * * ****  *******  *  * *  * ***  *  * *  ** **    

consensus_9991#0      AAATGGGTCTTGCAACGGGACCCGTGTTGTTTGCTGCTCAAAGATATCCTGAACTAAACG 418
consensus_9991#2      AAATGGGTCTTGCAACGGGACCCGTGTTGTTTGCTGCTCAAAGATATCCTGAAGTAAACG 230
consensus_9991#1      AAATGGGTCTTGCAACGGGACCCGTGTTGTTTGCTGCTCAAAGATATCCTGAAGTAAACG 318
consensus_9991#3      ------ATCTCCCA---GTCTTCGTATCATCTG-------AAGTTATAGGGAA-TAATTG 154
                             ***  **   *    *** *  * **       *** ***   *** ***  *

consensus_9991#0      CCATACTGCTGCGGCAATTCAGTTTAGATGGTGATACTGAAAGGGCT--TTAGAATTAGT 476
consensus_9991#2      CCATACTGCTGCGGCAATTCAGTTTAGATGGTGATACTGAAAGGGCT--TTAGAATTAGT 288
consensus_9991#1      CCATACTGCTGCGGCAATTCAGTTTAGATGGTGATACTGAAAGGGCT--TTAGAATTAGT 376
consensus_9991#3      ACA-GGTCTTGTG-----TATATCTTTGTGGTTATTGTGAAAGGTTTAATTTCTATCCCT 208
                       **   *  ** *     *   * *   **** **  *******  *  **   **   *

consensus_9991#0      TAAACAGTCAGATGGAGTTGGTCAAACTCGG-ATGTTAGCTGAATTT-CATTTCCA-GGC 533
consensus_9991#2      TAAACAGTCAGATGGAGTTGGTCAAACTCGG-ATGTTAGCTGAATTT-CATTTCCA-GGC 345
consensus_9991#1      TAAACAGTCAGATGGAGTTGGTCAAACTCGG-ATGTTAGCTGAATTT-CATTTCCA-GGC 433
consensus_9991#3      TGGCTAGACTAATCATTTTCTTTTAGGTTGCTATGTTGACTGTCCCAACGCTATCACAGT 268
                      *    ** *  **    **  *  *  * *  *****  ***      *  *  **  * 

consensus_9991#0      AGCTCAACGATGTT-TATTTCAATTCAGGGATTCTTTATCAAGAAAGGCTCTTCTACATG 592
consensus_9991#2      AGCTCAACGATGTT-TATTTCAATTCAGGGATTCTTTATCAAGAAAGGCTCTTCTACATG 404
consensus_9991#1      AGCTCAACGATGTT-TATTTCAATTCAGGGATTCTTTATCAAGAAAGGCTCTTCTACATG 492
consensus_9991#3      GGCACATTGATAATATGTACGAATTTGGAGAACATTTG---GGAATGGCATCTCAATTAA 325
                       ** **  ***  * * *   ****  * **   ***     *** ***   ** *    

consensus_9991#0      TTGCAGCGAATTTCCTACAACGTGGTCGATAAAATCGTATTTCCTCTAGTCAAATCTTAT 652
consensus_9991#2      TTGCAGCGAATTTCCTACAACGTGGTCGATAAAATCGTATTTCCTCTAGTCAAATCTTAT 464
consensus_9991#1      TTGCAGCGAATTTCCTACAACGTGGTCGATAAAATCGTATTTCCTCTAGTCAAAT----- 547
consensus_9991#3      TCG-ATGATGTGTTGGACTTTGTAACTGATGAGG-CGAATCTGG---------------- 367
                      * * *     * *   **   **    *** *   ** ** *                  

consensus_9991#0      TCTACCTCTCTTTCTGTCCGTCTATTTAGCCTTAACCTTACCTTAATTTTACCTGTTTCT 712
consensus_9991#2      TCTACCTCTCTTTCTGTCCGTCTATTTAG------------------------------- 493
consensus_9991#1      ------------------------------------------------------------
consensus_9991#3      ------------------------------------------------------------
                                                                                  

consensus_9991#0      TTCTCTTAATTTACATTCACAATACCTAAAGAATGGTACATTACACTTAACTGATAGATA 772
consensus_9991#2      ------------------------------------------------------------
consensus_9991#1      ------------------------------------------------------------
consensus_9991#3      ------------------------------------------------------------
                                                                                  

consensus_9991#0      GTTATTCTAATTTGTATTTTCAGTTCATTATTATTACTTTTTTACCTAGTTTATATATTA 832
consensus_9991#2      ------------------------------------------------------------
consensus_9991#1      ------------------------------------------------------------
consensus_9991#3      ------------------------------------------------------------
                                                                                  

consensus_9991#0      ATATGCAGAAAAAGAAACTTCCGCAATTTGTTAAATAATTTGCCTTTGTTGATATATTAG 892
consensus_9991#2      ------------------------------------------------------------
consensus_9991#1      ------------------------------------------------------------
consensus_9991#3      ------------------------------------------------------------
                                                                                  

consensus_9991#0      TACTAGTCTGTAATTTATTTACATAACTGCTTAACCAGATCGCTATTTTTGAGAACTTAT 952
consensus_9991#2      ------------------------------------------------------------
consensus_9991#1      ------------------------------------------------------------
consensus_9991#3      ------------------------------------------------------------
                                                                                  

consensus_9991#0      CTTTCAGCGTTTGTTCATAGAAATAGTACATGTGAAATATATATCTGTTGTAAAAAAAAA 1012
consensus_9991#2      ------------------------------------------------------------
consensus_9991#1      ------------------------------------------------------------
consensus_9991#3      ------------------------------------------------------------
                                                                                  

consensus_9991#0      AAAAAAA 1019
consensus_9991#2      -------
consensus_9991#1      -------
consensus_9991#3      -------