These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1132#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 595 fasta sequence [GTAGCCACCAGCGACTACATCTGCGAAAAACCTTCTGAAAACTCCGATTTGATTTCACTTATCATACATAAGGGATATCGGATATTTCCTTTGGACCGTCTCAAACTGCCGATACGTGATATTTTAAGTCCCAACGCCGCGGTAGCGACTTTTTTTTTTTTTTTTTTTACTGGAGACTAATGTACTAAACCAAACGGAAGTAACTTGCCAGTTGCCTGGCTAAGCTTGTGGTGTCTGAATGCCAACTCTGTGGGTGATGGAGTTGAGCAGGCAACTCTGTGGAAAGATGAGGAAGTCAGGTAGAAGGGCTCATCTTTCCTCTCCTCCATCCATCACCTTTGGGCTGGAGATCCACTTTTACACGCCGATTGTGCACCAGCTTGAGTTCCTGAGCGGCTGCTACACTGCAGAGGAGCTCTGCGTGAAAGCTGCCAAGAAATGCTCTATCTCTCCTTTGTGCCATAACCTGTTTGGGTTGTATGATGAGAAAGCAGGCATGTGGTACCCACCCAGCTACGAGTTCACAGTCACGGACGAAATAAGTCTGAAGCTGCATTATCGCATGAGATTTTATCTCAGAAATTGGCATGGCAAC] [+] EMBL BU805712 [GTAGCCACCAGCGACTACATCTGCGAAAAACCTTCTGAAAACTCCGATTTGATTTCACTTATCATACATAAGGGATATCGGATATTTCCTTTGGACCGTCTCAAACTGCCGATACGTGATATTTTAAGTCCCAACGCCGCGGTAGCGACTTTTTTTTTTTTTTTTTTTACTGGAGACTAATGTACTAAACCAAACGGAAGTAACTTGCCAGTTGCCTGGCTAAGCTTGTGGTGTCTGAATGCCAACTCTGTGGGTGATGGAGTTGAGCAGGCAACTCTGTGGAAAGATGAGGAAGTCAGGTAGAAGGGCTCATCTTTCCTCTCCTCCATCCATCACCTTTGGGCTGGAGATCCACTTTTACACGCCGATTGTGCACCAGCTTGAGTTCCTGAGCGGCTGCTACACTGCAGAGGAGCTCTGCGTGAAAGCTGCCAAGAAATGCTCTATCTCTCCTTTGTGCCATAACCTGTTTGGGTTGTATGATGAGAAAGCAGGCATGTGGTACCCACCCAGCTACGAGTTCACAGTCACGGACGAAATAAGTCTGAAGCTGCATTATCGCATGAGATTTTATCTCAGAAATTGGCATGGCAAC] consensusID : consensus_1132#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 458 fasta sequence [TGCGGTCGGGAGGAACGGGCTGAGGACTTGTTGCGAACCGTACGGCGGCGGCTGCGTCCCGGGAGCTGTCAAATATTGCGCAGAGGCTTCAGTCTCCAGACAGTGGACTAACCTGTCTAATCCATCAGACAAACAACTCCGAAGATTAACCTCTCTTAGCCTTGCGAAACCAGTTCTCAGTCTCAGTCACCGGAAGGTTCGTTTTAAAATGATTGCGAATTTGTCACATGGCTTTGGAGAATTCAATAACAACAAAAAATGGCGACAATCACGTTGCATCGTGTGGTCTTGCTGCGTCATTAAAAATATTCACGTAAACAGGGGAGAATAAACGAGGGATTTTCAGTGTCTGAATGCCAACTCTGTGGGTGATGGAGTTGAGCAGGCAACTCTGTGGAAAGATGAGGAAGTCAGGTAGAAGGGCTCATCTTTCCTCTCCTCCATCCATCACCTTTGGG] [+] EMBL BU805325 [TGCGGTCGGGAGGAACGGGCTGAGGACTTGTTGCGAACCGTACGGCGGCGGCTGCGTCCCGGGAGCTGTCAAATATTGCGCAGAGGCTTCAGTCTCCAGACAGTGGACTAACCTGTCTAATCCATCAGACAAACAACTCCGAAGATTAACCTCTCTTAGCCTTGCGAAACCAGTTCTCAGTCTCAGTCACCGGAAGGTTCGTTTTAAAATGATTGCGAATTTGTCACATGGCTTTGGAGAATTCAATAACAACAAAAAATGGCGACAATCACGTTGCATCGTGTGGTCTTGCTGCGTCATTAAAAATATTCACGTAAACAGGGGAGAATAAACGAGGGATTTTCAGTGTCTGAATGCCAACTCTGTGGGTGATGGAGTTGAGCAGGCAACTCTGTGGAAAGATGAGGAAGTCAGGTAGAAGGGCTCATCTTTCCTCTCCTCCATCCATCACCTTTGGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1132#0 GTAGCCACCAGCGACTACATCTGCGAAAAACCTTCTGAAAACTCCGATTTGATTTCACTT 60 consensus_1132#1 ---------------TGCGGTCGGGAGGAACGGGCTGAGGACT---------TGTTGCGA 36 * * * ** *** **** *** * * * consensus_1132#0 ATCATACATAAGGGATATCGGATATTTCCTTTGGACCGTCTCAAACTGCCGATACGTGAT 120 consensus_1132#1 ACCGTAC------GGCGGCGGCTGCGTCCCGGGAGCTGTCAAATATTGCGCAGAGGC--- 87 * * *** * *** * *** * * *** * * *** * * * consensus_1132#0 ATTTTAAGTCCCAACGCCGCGGTAGCGACTTTTTTTTTTTTTTTTTTTA------CTGGA 174 consensus_1132#1 ---TTCAGTCTCCAGACAGTGG-ACTAACCTGTCTAATCCATCAGACAAACAACTCCGAA 143 ** **** * * * * ** * ** * * * * * * * * * consensus_1132#0 GACTAATGTA-CTAAACCAAACGGAAGTAACTTGC-----CAGTTGCCTGGCTAAGCTTG 228 consensus_1132#1 GATTAACCTCTCTTAGCCTTGCGAAACCAGTTCTCAGTCTCAGTCACCGGA--AGGTTCG 201 ** *** * ** * ** ** ** * * * **** ** * * * * * consensus_1132#0 TGGTGTCTGAATGCCAACTCTGTGGGTGATGGAGTTG-AGCAGGCAACTCTGTGGAAAGA 287 consensus_1132#1 TTTTAAAATGATTGCGAATTTGTCAC--ATGGCTTTGGAGAATTCAATAACAACAAAAAA 259 * * ** * * * *** **** *** ** * *** *** * consensus_1132#0 TGAGGA-AGTCAGGTAGAAGGGCTCATCTTTCCTCTCCTCCATCCATCACCTTTGGGCTG 346 consensus_1132#1 TGGCGACAATCACGTTGCATCG--TGTGGTCTTGCTGCGTCATTAAAAATATTCACG-TA 316 ** ** * *** ** * * * * * ** * *** * * ** * * consensus_1132#0 GAGATCCACTTTTACACGCCGATTGTGCACCAGCTTGAGTTC--CTGAGCGGCTGCTACA 404 consensus_1132#1 AACAGGGGAGAATAAACGAGGGATTTTCAGTGTCTGAATGCCAACTCTGTGGGTGATGGA 376 * * ** *** * * * ** ** * * ** * ** ** * * consensus_1132#0 CTGCAGAGG--AGCTCTGCGTGAAAGCTGCCAAG-------AAATGCTCTATCTCTCCTT 455 consensus_1132#1 GTTGAGCAGGCAACTCTGTGGAAAGATGAGGAAGTCAGGTAGAAGGGCTCATCTTTCCTC 436 * ** * * ***** * ** *** ** * **** **** consensus_1132#0 TGTGCCAT--AACCTGTTTGGGTTGTATGATGAGAAAGCAGGCATGTGGTACCCACCCAG 513 consensus_1132#1 TCCTCCATCCATCACCTTTGGG-------------------------------------- 458 * **** * * ****** consensus_1132#0 CTACGAGTTCACAGTCACGGACGAAATAAGTCTGAAGCTGCATTATCGCATGAGATTTTA 573 consensus_1132#1 ------------------------------------------------------------ consensus_1132#0 TCTCAGAAATTGGCATGGCAAC 595 consensus_1132#1 ---------------------- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |