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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1211#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 593 fasta sequence
[CATCCAACATGGCGGCGCAGCGAAGGAACTTGATGCAGAGTCATCAGAGCTGGACAGATGACCTCCCGCTGTGCCAGATGTGTGGGGTTGGCACTGCCCCCAACTGTGTGTACGGCCCCGATGGCAAAGGAACTCAGAGCCACACCAACGAGGACGGACACCTGAGGTTCAGAGGCGAGGACGGCTGTTTCCTCTATGGGGTTTTTAATGGTTATGATGGCAGCAGGGTGGCCAGTTTTGCCTCCCAGTGTCTGACAGCTGAGCTCCTGCTTGGACAGATCAACTCCAGCCACACAGACAACGACATTCGCAGGATCCTCTCGCAGGCCTTTGATGTGGTGGAGAAGAGCTATTTTGAGACCATAGATGATGCTTTGGCTGAAAAGGCAAACCTGTCCAGTTATCACCTGCAACACAATGAGGAGCGTCTGAAGGAGCTGGAGCAGGAGGTGTCCGGAGGAGCGACAGCCATCGTTGCACTAATTATCAACAACAAGCTTTATATCGCCAACGTTGGTACCAACCGGGCTCTGCTGTGCAAGTCCAGCAGCGATGGCCAGAACCAAGTTCTCCAGATCGGCCGGCCTCACAAC]
[+] EMBL BU805979 [CATCCAACATGGCGGCGCAGCGAAGGAACTTGATGCAGAGTCATCAGAGCTGGACAGATGACCTCCCGCTGTGCCAGATGTGTGGGGTTGGCACTGCCCCCAACTGTGTGTACGGCCCCGATGGCAAAGGAACTCAGAGCCACACCAACGAGGACGGACACCTGAGGTTCAGAGGCGAGGACGGCTGTTTCCTCTATGGGGTTTTTAATGGTTATGATGGCAGCAGGGTGGCCAGTTTTGCCTCCCAGTGTCTGACAGCTGAGCTCCTGCTTGGACAGATCAACTCCAGCCACACAGACAACGACATTCGCAGGATCCTCTCGCAGGCCTTTGATGTGGTGGAGAAGAGCTATTTTGAGACCATAGATGATGCTTTGGCTGAAAAGGCAAACCTGTCCAGTTATCACCTGCAACACAATGAGGAGCGTCTGAAGGAGCTGGAGCAGGAGGTGTCCGGAGGAGCGACAGCCATCGTTGCACTAATTATCAACAACAAGCTTTATATCGCCAACGTTGGTACCAACCGGGCTCTGCTGTGCAAGTCCAGCAGCGATGGCCAGAACCAAGTTCTCCAGATCGGCCGGCCTCACAAC]
consensusID : consensus_1211#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 330 fasta sequence
[TCCCGCTGTGCCAGATGTGTGGGGTTGGCACGTGCCCCCAACTGTGTGTACGGCCCCGATGGCAAAGGAACTCAGAGCCACACCAACGAGGACGGACACCTGAGGTTCAGAGGCGAGGACGGCTGTTTCCTCTATGGGGTTTTTAATGGTTATGATGGCAGCAGGGTGGCCAGTTTTGCCTCCCAGGGTCTGACAGCTGAGCTTCTGCTTGGACAGATCAACTCCAGCCACACAGACAACGACATTCGCAGGATCCTCTCGCAGGTCTTTCCTAATTTAAATGACAGAACATTCACACTAGTGATTCCAGTGATGTATGTGAAGCGTCAC]
[+] EMBL FR0059529 [TCCCGCTGTGCCAGATGTGTGGGGTTGGCACGTGCCCCCAACTGTGTGTACGGCCCCGATGGCAAAGGAACTCAGAGCCACACCAACGAGGACGGACACCTGAGGTTCAGAGGCGAGGACGGCTGTTTCCTCTATGGGGTTTTTAATGGTTATGATGGCAGCAGGGTGGCCAGTTTTGCCTCCCAGGGTCTGACAGCTGAGCTTCTGCTTGGACAGATCAACTCCAGCCACACAGACAACGACATTCGCAGGATCCTCTCGCAGGTCTTTCCTAATTTAAATGACAGAACATTCACACTAGTGATTCCAGTGATGTATGTGAAGCGTCAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1211#0 CATCCAACATGGCGGCGCAGCGAAGGAACTTGATGCAGAGTCATCAGAGCTGGACAGATG 60
consensus_1211#1 ------------------------------------------------------------
consensus_1211#0 ACCTCCCGCTGTGCCAGATGTGTGGGGTTGGCAC-TGCCCCCAACTGTGTGTACGGCCCC 119
consensus_1211#1 ---TCCCGCTGTGCCAGATGTGTGGGGTTGGCACGTGCCCCCAACTGTGTGTACGGCCCC 57
******************************* *************************
consensus_1211#0 GATGGCAAAGGAACTCAGAGCCACACCAACGAGGACGGACACCTGAGGTTCAGAGGCGAG 179
consensus_1211#1 GATGGCAAAGGAACTCAGAGCCACACCAACGAGGACGGACACCTGAGGTTCAGAGGCGAG 117
************************************************************
consensus_1211#0 GACGGCTGTTTCCTCTATGGGGTTTTTAATGGTTATGATGGCAGCAGGGTGGCCAGTTTT 239
consensus_1211#1 GACGGCTGTTTCCTCTATGGGGTTTTTAATGGTTATGATGGCAGCAGGGTGGCCAGTTTT 177
************************************************************
consensus_1211#0 GCCTCCCAGTGTCTGACAGCTGAGCTCCTGCTTGGACAGATCAACTCCAGCCACACAGAC 299
consensus_1211#1 GCCTCCCAGGGTCTGACAGCTGAGCTTCTGCTTGGACAGATCAACTCCAGCCACACAGAC 237
********* **************** *********************************
consensus_1211#0 AACGACATTCGCAGGATCCTCTCGCAGGCCTTTGATGTGGTGGAGAAGAGCTATTTTGAG 359
consensus_1211#1 AACGACATTCGCAGGATCCTCTCGCAGGTCTTTCCTAATTTAAATGACAGA-ACATTCAC 296
**************************** **** * * * * ** * ** *
consensus_1211#0 ACCATAGAT---GATGCTTTGGCTGAAAAGGCAAACCTGTCCAGTTATCACCTGCAACAC 416
consensus_1211#1 ACTAGTGATTCCAGTGATGTATGTGAAGCGTCAC-------------------------- 330
** * *** ** * * **** * **
consensus_1211#0 AATGAGGAGCGTCTGAAGGAGCTGGAGCAGGAGGTGTCCGGAGGAGCGACAGCCATCGTT 476
consensus_1211#1 ------------------------------------------------------------
consensus_1211#0 GCACTAATTATCAACAACAAGCTTTATATCGCCAACGTTGGTACCAACCGGGCTCTGCTG 536
consensus_1211#1 ------------------------------------------------------------
consensus_1211#0 TGCAAGTCCAGCAGCGATGGCCAGAACCAAGTTCTCCAGATCGGCCGGCCTCACAAC 593
consensus_1211#1 ---------------------------------------------------------
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |