These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1248#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 452 fasta sequence [GTTGATGCGCCCTGGAAGCTGCGTTTATTCTGCCGTGTTTTAACCGCTCCTCTCCGCCTGCGCTGCTGCGGTTGAGCCACGTATACAGGAACTGCGCTGTGACAGCCGGACTGACCGGATACTCCAGCTGTTGGGGGCGTGCAGCTCTCGGTAGCCGCAGTTAGCTTAGCTTAGCTTAGCTTAGCTCAGCTCAGCCCAGCTCAGCCCAGCTGCAGAGCTTCTCTGTCGTGTCGCTTCTTCCGTCTTTCACGTTTTTCAGGCAGTCATGGCTGGGAAGAGCCGCCACTTCCTGACTGGGAATATCACCACCTGCCTGCTGCTCCTGGCCGCGCACGCGTGTGCACGGCCCGCAAACATGTCGGCCCTGAAGGACAAAGCTCCAGTCAGCAAAGACGAGAACGAGATTCTCCCCCCGGACCACCTCAACGCCGTGAAAATGGAGCTGGACGGGC] [+] EMBL BU806183 [GTTGATGCGCCCTGGAAGCTGCGTTTATTCTGCCGTGTTTTAACCGCTCCTCTCCGCCTGCGCTGCTGCGGTTGAGCCACGTATACAGGAACTGCGCTGTGACAGCCGGACTGACCGGATACTCCAGCTGTTGGGGGCGTGCAGCTCTCGGTAGCCGCAGTTAGCTTAGCTTAGCTTAGCTTAGCTCAGCTCAGCCCAGCTCAGCCCAGCTGCAGAGCTTCTCTGTCGTGTCGCTTCTTCCGTCTTTCACGTTTTTCAGGCAGTCATGGCTGGGAAGAGCCGCCACTTCCTGACTGGGAATATCACCACCTGCCTGCTGCTCCTGGCCGCGCACGCGTGTGCACGGCCCGCAAACATGTCGGCCCTGAAGGACAAAGCTCCAGTCAGCAAAGACGAGAACGAGATTCTCCCCCCGGACCACCTCAACGCCGTGAAAATGGAGCTGGACGGGC] consensusID : consensus_1248#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 272 fasta sequence [TAACCGCTCCTCTCCGCCTGGGCTGCTGCGGTTGAGCCACGTATACAGGAACTGCGGTGTGACAGCCGGACTGACCGGATACTCCAGCTGTTGGGGGCGTGCAGCTCTCGGTAGCCGCAGTTAGCTTAGCTTAGCTTAGCTTAGCTCAGCCCAGCTGCAGAGCTTCTCTGTCGTGTCGCTTCTTCCGTCTTTCACGTTTTTCAGGCAGTCATGGGTGGGAAGAGCCGCCACTTCCTGACTGGGAATATCACCACCTGCCTGCTGCTCCTGGC] [+] EMBL FR0057463 [TAACCGCTCCTCTCCGCCTGGGCTGCTGCGGTTGAGCCACGTATACAGGAACTGCGGTGTGACAGCCGGACTGACCGGATACTCCAGCTGTTGGGGGCGTGCAGCTCTCGGTAGCCGCAGTTAGCTTAGCTTAGCTTAGCTTAGCTCAGCCCAGCTGCAGAGCTTCTCTGTCGTGTCGCTTCTTCCGTCTTTCACGTTTTTCAGGCAGTCATGGGTGGGAAGAGCCGCCACTTCCTGACTGGGAATATCACCACCTGCCTGCTGCTCCTGGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1248#0 GTTGATGCGCCCTGGAAGCTGCGTTTATTCTGCCGTGTTTTAACCGCTCCTCTCCGCCTG 60 consensus_1248#1 ----------------------------------------TAACCGCTCCTCTCCGCCTG 20 ******************** consensus_1248#0 CGCTGCTGCGGTTGAGCCACGTATACAGGAACTGCGCTGTGACAGCCGGACTGACCGGAT 120 consensus_1248#1 GGCTGCTGCGGTTGAGCCACGTATACAGGAACTGCGGTGTGACAGCCGGACTGACCGGAT 80 *********************************** *********************** consensus_1248#0 ACTCCAGCTGTTGGGGGCGTGCAGCTCTCGGTAGCCGCAGTTAGCTTAGCTTAGCTTAGC 180 consensus_1248#1 ACTCCAGCTGTTGGGGGCGTGCAGCTCTCGGTAGCCGCAGTTAGCTTAGCTTAGCTTAGC 140 ************************************************************ consensus_1248#0 TTAGCTCAGCTCAGCCCAGCTCAGCCCAGCTGCAGAGCTTCTCTGTCGTGTCGCTTCTTC 240 consensus_1248#1 TT---------------AGCTCAGCCCAGCTGCAGAGCTTCTCTGTCGTGTCGCTTCTTC 185 ** ******************************************* consensus_1248#0 CGTCTTTCACGTTTTTCAGGCAGTCATGGCTGGGAAGAGCCGCCACTTCCTGACTGGGAA 300 consensus_1248#1 CGTCTTTCACGTTTTTCAGGCAGTCATGGGTGGGAAGAGCCGCCACTTCCTGACTGGGAA 245 ***************************** ****************************** consensus_1248#0 TATCACCACCTGCCTGCTGCTCCTGGCCGCGCACGCGTGTGCACGGCCCGCAAACATGTC 360 consensus_1248#1 TATCACCACCTGCCTGCTGCTCCTGGC--------------------------------- 272 *************************** consensus_1248#0 GGCCCTGAAGGACAAAGCTCCAGTCAGCAAAGACGAGAACGAGATTCTCCCCCCGGACCA 420 consensus_1248#1 ------------------------------------------------------------ consensus_1248#0 CCTCAACGCCGTGAAAATGGAGCTGGACGGGC 452 consensus_1248#1 -------------------------------- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |