Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 1422 cluster # 1422       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1422#0 length = 844 sequences # 3  
consensusID : consensus_1422#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 844
fasta sequence 
                              [TCTTTTCTTTTCTTTTTTAAACATTGATTTGTTCATGAAAAAAAACCAAAAAGTGTTAATTTTCCCTTTTGCATTCTTTTTTCCGGTAGAACCACACAGAGACGGTCCGTCTGTAAAACGATGTCAACGTAACAAGAGAAAATGAGCAGAAGGGGGAAAAAAATCACAAAACAAAATAAAGAGTTGCCGTCAATACCGCTTTGTACGTTTCCTGTCGACCCCTGTAACCCAAAGGCAACCTTTGCTTTCAACGCTCCTTATCAATGATTTCTTTAAGTTACCATGTGACCTTTGCTCTTGGTGGAACATGTATTACATTTAAAATCATAGCATAGTCACTCAGAGGGTTACATCGCACTTGCCTTTAAATATTTCCTGTCAATTGCCGTCATTATGACCTGTTTCATGGTCTTTTCTACTCTTTAGTCTGTTTTGCTCATCCTCTCATCTTCTCCTACTTCCTCCCACCCCTAATGAAGTAAGAAGAGAGAAACGACTTGACATTTGTGGCCTTGTCCTCGTATAACAATTTGCGTGGAAGGCTAAGATTTTTGGGAGCAAACGTCTGGTGGCTTTCCCTCTCACACCAATCACACCCGGTACATCCTTCCGCCAAAACATCAACTGAAACATGGAGCTCTGAAGGCGCAATTGGTGATGTGGGGATAAAGAAGGTTAGCCTGCCTCTGTGGTGCTTCCACCAGAAAAAGCAAAAGAAGTTTCAATTTTCAAACCACAAACTCAAAAGTTTAGAGCTGCTGAATTAATGGAGATAACATACATGGCGGGAGGATAAAGGGTTGATATTACTAAGATACGGAGGGGGAAAAAATCATTGGAGTTT]

[-] EMBL CA591560             [TCTTTTCTTTTCTTTTTTAAACATTGATTTGTTCATGAAAAAAAACCAAAAAGTGTTAATTTTCCCTTTTGCATTCTTTTTTCCGGTAGAACCACACAGAGACGGTCCGTCTGTAAAACGATGTCAACGTAACAAGAGAAAATGAGCAGAAGGGGGAAAAAAATCACAAAACAAAATAAAGAGTTGCCGTCAATACCGCTTTGTACGTTTCCTGTCGACCCCTGTAACCCAAAGGCAACCTTTGCTTTCAACGCTCCTTATCAATGATTTCTTTAAGTTACCATGTGACCTTTGCTCTTGGTGGAACATGTATTACATTTAAAATCATAGCATAGTCACTCAGAGGGTTACATCGCACTTGCCTTTAAATATTTCCTGTCAATTGCCGTCATTATGACCTGTTTCATGGTCTTTTCTACTCTTTAGTCTGTTTTGCTCATCCTCTCATCTTCTCCTACTTCCTCCCACCCCTAATGAAGTAAGAAGAGAGAAACGACTTGACATTTGTGGCCTTGTCCTCGTATAACAATTTGCGTGGAAGGCTAAGATTTTTGGGAGCAAACGTCTGGTGGCTTTCCCTCTCACACCAATCACACCCGGTACATCCTTCCGCCAAAACATCAACTGAAACATGGAGCTCTGAAGGCGCAATTGGTGATGTGGGGATAAAGAAGGTTAGCCTGCCTCTGTGGTGCTTCCACCAGAAAAAc                                                                                                                                      ]
[+] EMBL CA331903             [                    ACATTGATTTGTTCATGAAAAAAAACTAAAAAGTGTTAATTTTCCCTTTTGCATTCTTTTTTCCGGTAGAACCACACAGAGACGGTCCGTCTGTAAAACGATGTCAACGTAACAAGAGAAAATGAGCAGAAGGGGGAAAAAAATCACAAAACAAAATAAAGAGTTGCCGTCAATACCGCTTTGTACGTTTCCTGTCGACCCCTGTAACCCAAAGGCAACCTTTGCTTTCAACGCTCCTTATCAATGATTTCTTTAAGTTACCATGTGACCTTTGCTCTTGGTGGAACATGTATTACATTTAAAATCATAGCATAGTCACTCAGAGGGTTACATCGCACTTGCCTTTAAATATTTCCTGTCAATTGCCGTCATTATGACCTGTTTCATGGTCTTTTCTACTCTTTAGTCTGTTTTGCTCATCCTCTCATCTTCTCCTACTTCCTCCCACCCCTAATGAAGTAAGAAGAGAGAAACGACTTGACATTTGTGGCCTTGTCCTCGTATAACAATTTGCGTGGAAGGCTAAGATTTTTG                                                                                                                                                                                                                                                                                                  ]
[-] EMBL BU805160             [                                                                                                                                                                                                                                                                                                                                                                                              TTGCCGTCATTATGACCTGTTTCATGGTCTTTTCTACTCTTTAGTCTGTTTTGCTCATCCTCTCATCTTCTCCTACTTCCTCCCACCCCTAATGAAGTAAGAAGAGAGAAACGACTTGACATTTGTGGCCTTGTCCTCGTATAACAATTTGCGTGGAAGGCTAAGATTTTTGGGAGCAAACGTCTGGTGGCTTTCCCTCTCACACCAATCACACCCGGTACATCCTTCCGCCAAAACATCAACTGAAACATGGAGCTCTGAAGGCGCAATTGGTGATGTGGGGATACCGAAGGTTAGCCTGCCTCTGTGGTGCTTCCACCAGAAAATGCAAAAGAAGTTTCAATTTTCAAACCACAAACTCAAAAGTTTAGAGCTGCTGAATTAATGGAGATAACATACATGGCGGGAGGATAAAGGGTTGATATTACTAAGATACGGAGGGGGAAAAAATCATTGGAGTTT]




>consensus_1422#0
TCTTTTCTTTTCTTTTTTAAACATTGATTTGTTCATGAAAAAAAACCAAAAAGTGTTAAT
TTTCCCTTTTGCATTCTTTTTTCCGGTAGAACCACACAGAGACGGTCCGTCTGTAAAACG
ATGTCAACGTAACAAGAGAAAATGAGCAGAAGGGGGAAAAAAATCACAAAACAAAATAAA
GAGTTGCCGTCAATACCGCTTTGTACGTTTCCTGTCGACCCCTGTAACCCAAAGGCAACC
TTTGCTTTCAACGCTCCTTATCAATGATTTCTTTAAGTTACCATGTGACCTTTGCTCTTG
GTGGAACATGTATTACATTTAAAATCATAGCATAGTCACTCAGAGGGTTACATCGCACTT
GCCTTTAAATATTTCCTGTCAATTGCCGTCATTATGACCTGTTTCATGGTCTTTTCTACT
CTTTAGTCTGTTTTGCTCATCCTCTCATCTTCTCCTACTTCCTCCCACCCCTAATGAAGT
AAGAAGAGAGAAACGACTTGACATTTGTGGCCTTGTCCTCGTATAACAATTTGCGTGGAA
GGCTAAGATTTTTGGGAGCAAACGTCTGGTGGCTTTCCCTCTCACACCAATCACACCCGG
TACATCCTTCCGCCAAAACATCAACTGAAACATGGAGCTCTGAAGGCGCAATTGGTGATG
TGGGGATAAAGAAGGTTAGCCTGCCTCTGTGGTGCTTCCACCAGAAAAAGCAAAAGAAGT
TTCAATTTTCAAACCACAAACTCAAAAGTTTAGAGCTGCTGAATTAATGGAGATAACATA
CATGGCGGGAGGATAAAGGGTTGATATTACTAAGATACGGAGGGGGAAAAAATCATTGGA
GTTT

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)