Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 1626 cluster # 1626       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1626#0 length = 800 sequences # 3  

consensusID : consensus_1626#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 800
fasta sequence
                              [CAAAGGCTCGATCATTAGGAGGCTGTAGCAAAGCAGAATCGTTGAAAGAGTTTCTGCTCTAATGATGTGGCTGATTGAAAAATCTTTGTTAATCAAAAGAAATGAAGAAGAGGTTTAATATCAACCTGGATGACTCCACTTTCACCAAGGAAAGACCACAGCCGCAGTATGAGTCCTTGTTCAAAAAAGGACAAACCTCCTCGGCAACATCTCCTGCAGAACGGTGCTCTGAGCACCTGTCCTATGCACAATTCATCGTCCAGAGTAAGAGCAATGCAGCCGCTGCACCCCCGAGGGAAGCTCCTTCCAAAGTGGCCAGAGCTGAAGATGCTGAAGAGACTAACGTGATCCAGAAAGAGTCAGCTTCGGTGTCATGCGTCCCAGGAGGACACCAGAGAGTTCAGGACCCTGCTAAGTTTACTGAAGATGGATTTAATAGGTTGCAGACAAGTGAGGCCACTCAGAATTCCACCCAGCACATCGAAGGAACTGGTTCAATTTCAGATCCGAATCTTCCGCAGGGACCAAAACCGGTGGGGTCTGGGAGCAGCATTGTTGTCAGCCCACGCCAGAGGGGGAATCCCATTCTGAAGTACATAAGGAGTGTCCCATGGGAAATTGGAGATGTTGTTCCAGACTATGTTTTAGGGCAGACCACTTGTGCTCTCTTCCTCAGCCTAAGGTATCACAATCTCAATCCAAATTATATCCACGATCGTCTGAAGCTTCTCGGACAGACTTTCACCCTGCGAGTGTTACTAGTACAAGTAGATGTGAAAGACCCTTATCATGCTTTGAGA]

[+] EMBL BU807187             [CAAAGGCTCGATCATTAGGAGGCTGTAGCAAAGCAGAATCGTTGAAAGAGTTTCTGCTCTAATTATGTGGTTGATTGAAAAATCTTTGTTAATCAAAAGAAATGAAGAAGAGGTTTAATATCAACCTGGATGACTCCACTTTCACCAAGGAAAGACCACAGCCGCAGTATGAGTCCTTGTTCAAAAAAGGACAAACCTCCTCGGCAACATCTCCTGCAGAACGGTGCTCTGAGCACCTGTCCTATGCACAATTCATCGTCCAGAGTAAGAGCAATGCAGCCGCTGCACCCCCGAGGGAAGCTCCTTCCAAAGTGGCCAGAGCTGAAGATGCTGAAGAGACTAACGTGATCCAGAAAGAGTCAGCTTCGGTGTCATGCGTCCCAGGAGGACACCAGAGAGTTCAGGACCCTGCTAAGTTTACTGAAGATGGATTTAATAGGTTGCAGACAAGTGAGGCCACTCAGAATTCCACCCAGCACATCGAAGGAACTGGTTCAATTTCAGATCCGAATCTTCCGCAGGGACCAAAACCGGTGGGGTCTGGGAGCAGCATTGTTGTCAGCCCACGCCAGAGGGGGAATCCCATTCTGAAGTACATA                                                                                                                                                                                                         ]
[+] EMBL CA846494             [                                                AGTTTCTGCTCTCTTGATGTGGCTGATTGAAAAATCTTTGTTAATCAAAAGAAATGAAGAAGAGGTTTAATATCAACCTGGATGACTCCTCTTTCACCAAGGAAAGACCACAGCCGCAGTACGAGTCCTTGTTCAAAAAAGGACAAACCTCCTCGGCAACATCTCCTGCAGAACGGTGCTCTGAGCACCTGTCCTATGCACAATTCATCGTCCAGAGTAAGAGCAATGCAGCCGCTGCACCCCCGAGGGAAGCTCCTTCCAAAGTGGCCAGAGCTGAAGATGCTGAAGAGACTAACGTGATCCAGAAAGAGTCAGCTTCGGTGTCATGCGTCCCAGGAGGACACCAGAGAGTTCAGGACCCTGCTAAGTTTACTGAAGATGGATTTAATAGGTTGCAGACAAGTGAGGCCACTCAGAATTCCACCCAGCACATCGAAGGAACTGGTTCAATTTCAGATCCGAATCTTCCGCAGGGACCAAAACCGGTGGGGTCTGGGAGCAGCATTGTTGTCAGCCCACGCCAGAGGGGGAATCCCATTCTGAAGTACATAAGGAGTGTCCCATGGGAAATTGGAGATGTTGTTCCAGACTATGTTTTAGGGCAGACCACTTGTGCTCTCTTCCTCAGCCTAAGGTATCACAATCTCAATCCAAATTATATCCACGATCGTCTGAAGCTTCTCGGACAGACTTTCACCCTGCGAGTGTTACTAGTACAAGTAGATGTGAAAGACCCTTATCATGCTTTGAGA]
[+] EMBL BU807323             [                                                                                 ATCTTTGTTAATCAAAAGAAATGAAGAAGAGGTTTAATATCAACCTGGATGACTCCACTTTCACCAAGGAAAGACCACAGCCGCAGTATGAGTCCTTGTTCAAAAAAGGACAAACCTCCTCGGCAACATCTCCTGCAGAACGGTGTTCTTTGCACCTGTCCTATGCACAATTCATCGTCCAGAGTAAGAGCAATGCAGCCGCTGCACCCCCGAGGGAAGCTCCTTCCAAAGTGGCCAGAGCTGAAGATGCTGAAGAGACTAACGTGATCCAGAAAGAGTCAGCTTCGGTGTCATGCGTCCCAGGAGGACACCAGAGAGTTCAGGACCCTGCTAAGTTTACTGAAGATGGATTTAATAGGTTGCAGACAAGTGAGGCCACTCAGAATTCCACCCAGCACATCGAAGGAACTGGTTCAATTTCAGATCCGAATCTTCCGCAGGGACCAAA                                                                                                                                                                                                                                                                               ]


>consensus_1626#0 CAAAGGCTCGATCATTAGGAGGCTGTAGCAAAGCAGAATCGTTGAAAGAGTTTCTGCTCT AATGATGTGGCTGATTGAAAAATCTTTGTTAATCAAAAGAAATGAAGAAGAGGTTTAATA TCAACCTGGATGACTCCACTTTCACCAAGGAAAGACCACAGCCGCAGTATGAGTCCTTGT TCAAAAAAGGACAAACCTCCTCGGCAACATCTCCTGCAGAACGGTGCTCTGAGCACCTGT CCTATGCACAATTCATCGTCCAGAGTAAGAGCAATGCAGCCGCTGCACCCCCGAGGGAAG CTCCTTCCAAAGTGGCCAGAGCTGAAGATGCTGAAGAGACTAACGTGATCCAGAAAGAGT CAGCTTCGGTGTCATGCGTCCCAGGAGGACACCAGAGAGTTCAGGACCCTGCTAAGTTTA CTGAAGATGGATTTAATAGGTTGCAGACAAGTGAGGCCACTCAGAATTCCACCCAGCACA TCGAAGGAACTGGTTCAATTTCAGATCCGAATCTTCCGCAGGGACCAAAACCGGTGGGGT CTGGGAGCAGCATTGTTGTCAGCCCACGCCAGAGGGGGAATCCCATTCTGAAGTACATAA GGAGTGTCCCATGGGAAATTGGAGATGTTGTTCCAGACTATGTTTTAGGGCAGACCACTT GTGCTCTCTTCCTCAGCCTAAGGTATCACAATCTCAATCCAAATTATATCCACGATCGTC TGAAGCTTCTCGGACAGACTTTCACCCTGCGAGTGTTACTAGTACAAGTAGATGTGAAAG ACCCTTATCATGCTTTGAGA



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)