These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1632#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 445 fasta sequence [CTGCTCTTTATTAAAGTGCTTCAAACCCCAATGAAGGAACTGGTTCGTCTGCAGGATAACAACCAAGTGGGAATTTCTGAAACTCCATGAGTATCTGAATGATTCCCAGTGTTCTGGACCCCATCAGGAGCTATATTGGATCAAACTCACCGCCTGTCCTCACTGGATGGCGGCATCAGCACCGTCTGTGGGCTGACCAGCATCCATGTATCCGGAGAAGTCTCCCAACGGCAGCAGGTGGTACACCCCTCTCACTGGGAACTCCACAGGGCTGGACTGAGGGGGTGGAGGAGGCAGCGGAGGGCTTTTGGTATCCAGTGCAAAGCTCCAGCTCCTCACCGAGTGGTTATATTTAGCGATGGCCGCGGCCAGAAGCTCCTGGGGCACCAGCAGGGGCTGCTCTGGCACCTGATCAGCGAGGAGGTTCAGGGGCGACGGGCCAGGG] [+] EMBL CA331195 [CTGCTCTTTATTAAAGTGCTTCAAACCCCAATGAAGGAACTGGTTCGTCTGCAGGATAACAACCAAGTGGGAATTTCTGAAACTCCATGAGTATCTGAATGATTCCCAGTGTTCTGGACCCCATCAGGAGCTATATTGGATCAAACTCACCGCCTGTCCTCACTGGATGGCGGCATCAGCACCGTCTGTGGGCTGACCAGCATCCATGTATCCGGAGAAGTCTCCCAACGGCAGCAGGTGGTACACCCCTCTCACTGGGAACTCCACAGGGCTGGACTGAGGGGGTGGAGGAGGCAGCGGAGGGCTTTTGGTATCCAGTGCAAAGCTCCAGCTCCTCACCGAGTGGTTATATTTAGCGATGGCCGCGGCCAGAAGCTCCTGGGGCACCAGCAGGGGCTGCTCTGGCACCTGATCAGCGAGGAGGTTCAGGGGCGACGGGCCAGGG] consensusID : consensus_1632#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 313 fasta sequence [TCTGCTCTTTATTAAAGTGCTTCCAACCCCAATGAAGGAACTGGTTCGTCTGCAGGATAACAACCAAGTGGGAATTTCTGAAACTCCATGAGTATCTGAATGATTCCCAGTGTTCTGGACCCCATCAGGAGCTATCGCCTGTCCTCACTGGATGGCGGCATCAGCACCGTCTGTGGGCTGACCAGCATCCATGTATCCGGAGAAGTCTCCCAACGGCAGCAGGTGTTACACCCCTCTCACTGGGAACTCCACAGGGCTGGACTGAGGGGGTGGAGGAGGCAGCGGAGGGCTTTTGGTATCCAGTGCAAAGCCC] [+] EMBL CA331314 [TCTGCTCTTTATTAAAGTGCTTCCAACCCCAATGAAGGAACTGGTTCGTCTGCAGGATAACAACCAAGTGGGAATTTCTGAAACTCCATGAGTATCTGAATGATTCCCAGTGTTCTGGACCCCATCAGGAG CGCCTG ] [+] EMBL CA331320 [ TGCTCTTTATTAAAGTGCTTCCCCCCCCAATGAAGGAACTGGTTCGTCTGCAGGATAACAACCAAGTGGGAATTTCTGAAACTCCATGAGTATCTGAATGATTCCCAGTGTTCTGGACCCCATCAGGAGCTATCGCCTGTCCTCACTGGATGGCGGCATCAGCACCGTCTGTGGGCTGACCAGCATCCATGTATCCGGAGAAGTCTCCCAACGGCAGCAGGTGTTACACCCCTCTCACTGGGAACTCCACAGGGCTGGACTGAGGGGGTGGAGGAGGCAGCGGAGGGCTTTTGGTATCCAGTGCAAAGCCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1632#0 -CTGCTCTTTATTAAAGTGCTTCAAACCCCAATGAAGGAACTGGTTCGTCTGCAGGATAA 59 consensus_1632#1 TCTGCTCTTTATTAAAGTGCTTCCAACCCCAATGAAGGAACTGGTTCGTCTGCAGGATAA 60 ********************** ************************************ consensus_1632#0 CAACCAAGTGGGAATTTCTGAAACTCCATGAGTATCTGAATGATTCCCAGTGTTCTGGAC 119 consensus_1632#1 CAACCAAGTGGGAATTTCTGAAACTCCATGAGTATCTGAATGATTCCCAGTGTTCTGGAC 120 ************************************************************ consensus_1632#0 CCCATCAGGAGCTATATTGGATCAAACTCACCGCCTGTCCTCACTGGATGGCGGCATCAG 179 consensus_1632#1 CCCATCAGGAGCTAT----------------CGCCTGTCCTCACTGGATGGCGGCATCAG 164 *************** ***************************** consensus_1632#0 CACCGTCTGTGGGCTGACCAGCATCCATGTATCCGGAGAAGTCTCCCAACGGCAGCAGGT 239 consensus_1632#1 CACCGTCTGTGGGCTGACCAGCATCCATGTATCCGGAGAAGTCTCCCAACGGCAGCAGGT 224 ************************************************************ consensus_1632#0 GGTACACCCCTCTCACTGGGAACTCCACAGGGCTGGACTGAGGGGGTGGAGGAGGCAGCG 299 consensus_1632#1 GTTACACCCCTCTCACTGGGAACTCCACAGGGCTGGACTGAGGGGGTGGAGGAGGCAGCG 284 * ********************************************************** consensus_1632#0 GAGGGCTTTTGGTATCCAGTGCAAAGCTCCAGCTCCTCACCGAGTGGTTATATTTAGCGA 359 consensus_1632#1 GAGGGCTTTTGGTATCCAGTGCAAAGCCC------------------------------- 313 *************************** * consensus_1632#0 TGGCCGCGGCCAGAAGCTCCTGGGGCACCAGCAGGGGCTGCTCTGGCACCTGATCAGCGA 419 consensus_1632#1 ------------------------------------------------------------ consensus_1632#0 GGAGGTTCAGGGGCGACGGGCCAGGG 445 consensus_1632#1 -------------------------- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |