These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1658#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 352 fasta sequence [TTCGTTTGCTGTGCTTGTTGACGGTGTTGGGGTGCGGGTGTCCGCTGGACTCCGGCATGCTGTTCCCCCGGGAGACCTCCTCCAGGGAGGTGAAGGAGCTGAACGGCCTGTGGAAGTTCAGGGCCGACATGTCCCCGAACAGGAATCAGGGCTTCGAGAGAGCGTGGTACAAAGCCCGTCTGGAGGAGAGCGGCCCTGTGGTGGACATGCCCGTCCCTGCCAGCTACAACGACATCACGCAGGACTCCAGCTTGAGGGACTTCATCGGCTGGGNGTGGTATGAGCGGGAGGTGCTGGTGCCGGCCCGCTGGGTCGCCGGTGATGGGACCCGACTGGTCCTCCCGGGGGGAAG] [+] EMBL FR0062570 [TTCGTTTGCTGTGCTTGTTGACGGTGTTGGGGTGCGGGTGTCCCCTGGACTCCGGCATGCTGTTCCCCCGGGAGACCTCCTCCAGGGAGGTGAAGGAGCTGAACGGCCTGTGGAAGTTCAGGGCCGACATGTCCCCGAACAGGAATCAGGGCTTCGAGAGAGCGTGGTACAAAGCCCGTCTGGAGGAGAGCGGCCCTGTGGTGGACATGCCCGTCCCTGCCAGCTACAACGACATCACGCAGGACTCCAGCTTGAGGGACTTCATCGGCTGGG ] [+] EMBL FR0059756 [ TGTTGACGGTGTTGGGGTGCGGGTGTCCGCTGGACTCCGGCATGCTGTTCCCCCGGGAGACCTCCTCCAGGGAGGTGAAGGAGCTGAACGGCCTGTGGAAGTTCAGGGCCGACATGTCCCCGAACAGGAATCAGGGCTTCGAGAGAGCGTGGTACAAAGCCCGTCTGGAGGAGAGCGGCCCTGTGGTGGACATGCCCGTCCCTGCCAGCTACAACGACATCACGCAGGACTCCAGCTTGAGGGACTTCATCGGCTGGGNGTGGTATGAGCGGGAGGTGCTGGTGCCGGCCCGCTGGGTCGCCGGTGATGGGACCCGACTGGTCCTCCCGGGGGGAAG] consensusID : consensus_1658#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 295 fasta sequence [GGGGCTGGGCGTGCTCTCTCCCCTTGACTCCGCCATGCTGTTCCCCCGAAAGACCTCCTCCAGGGAGGTGAAGGAGCTGAACGGCCTGTGGAAGTTCAGGGCCGACATGTCCCCGAACAGGAATCAGGTCTTCGAGAGAGCGTGGTACAAAGCCCGTCTGGAGGAGAGCGGCCCTGTGGGGTACATGCCCGTGCCTGCCAGCTACAACGACATCACGCAGGACTCCAGCTTGAGGGACTTCATCGGCTTGGTGTGGTATGAGCGAAAGGTGCTGGCGCCGCCCCCGCTGTTCGCC] [+] EMBL FR0061044 [GGGGCTGGGCGTGCTCTCTCCCCTTGACTCCGCCATGCTGTTCCCCCGAAAGACCTCCTCCAGGGAGGTGAAGGAGCTGAACGGCCTGTGGAAGTTCAGGGCCGACATGTCCCCGAACAGGAATCAGGTCTTCGAGAGAGCGTGGTACAAAGCCCGTCTGGAGGAGAGCGGCCCTGTGGGGTACATGCCCGTGCCTGCCAGCTACAACGACATCACGCAGGACTCCAGCTTGAGGGACTTCATCGGCTTGGTGTGGTATGAGCGAAAGGTGCTGGCGCCGCCCCCGCTGTTCGCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1658#0 TTCGTTTGCTGTGCTTGTTGACGGTGTTGGG-GTGCGGGTGTCCGCTGGACTCCGGCATG 59 consensus_1658#1 ----------------------GGGGCTGGGCGTGCTC-TCTCCCCTTGACTCCGCCATG 37 ** * **** **** * *** ** ******* **** consensus_1658#0 CTGTTCCCCCGGGAGACCTCCTCCAGGGAGGTGAAGGAGCTGAACGGCCTGTGGAAGTTC 119 consensus_1658#1 CTGTTCCCCCGAAAGACCTCCTCCAGGGAGGTGAAGGAGCTGAACGGCCTGTGGAAGTTC 97 *********** *********************************************** consensus_1658#0 AGGGCCGACATGTCCCCGAACAGGAATCAGGGCTTCGAGAGAGCGTGGTACAAAGCCCGT 179 consensus_1658#1 AGGGCCGACATGTCCCCGAACAGGAATCAGGTCTTCGAGAGAGCGTGGTACAAAGCCCGT 157 ******************************* **************************** consensus_1658#0 CTGGAGGAGAGCGGCCCTGTGGTGGACATGCCCGTCCCTGCCAGCTACAACGACATCACG 239 consensus_1658#1 CTGGAGGAGAGCGGCCCTGTGGGGTACATGCCCGTGCCTGCCAGCTACAACGACATCACG 217 ********************** * ********** ************************ consensus_1658#0 CAGGACTCCAGCTTGAGGGACTTCATCGGCTGGGNGTGGTATGAGCGGGAGGTGCTGGTG 299 consensus_1658#1 CAGGACTCCAGCTTGAGGGACTTCATCGGCTTGGTGTGGTATGAGCGAAAGGTGCTGGCG 277 ******************************* ** ************ ********* * consensus_1658#0 CCGGCCCGCTGGGTCGCCGGTGATGGGACCCGACTGGTCCTCCCGGGGGGAAG 352 consensus_1658#1 CCGCCCCCGCTGTTCGCC----------------------------------- 295 *** *** * ***** |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |