Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 1726 cluster # 1726       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1726#0 length = 831 sequences # 3  
consensusID : consensus_1726#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 831
fasta sequence 
                              [TATTAAACTGAATGTTCTTGTCGCGACAAAAGCGTCCGGACCCGAGGCTGACTGTGGGGAAATAGCCGAATGAAGAAACAACTGATCTTTCACTTCACATTCAGAGGACTTCAAACCCGAGGAAAAAAGAGTAAAAGAAGAAAATGGACTATAAATTACGGAAGGCTGAACCCAGAGACGTGTCTGACATTTTACGACTGGTGAAGGAACTTGCTAAATACGAAGAATGTGAGAACCAGGTGACTCTGACTGAGAAAGATCTCCTGGAGGATGGATTTGGTGAGACGCCGTTTTACCATTGCCTCATCGCTGAAGTCCAAGAGGAGAACAGCAGTGAGGGCCTGAAGGTGGTGGGCTTTGCCATGTATTATTTCACTTATGACCCCTGGGTGGGGAAGCAGCTCTACTTGGAGGGACTCTACGTGATGGAGCCCTACAGAGGGATGGGAATCGGTTCTGAGGTCCTGCGGCACCTGAGCAACTTGGCCATAAAGATGCGCTGCACAGGCATGATGTTTGTGGTGGCGGAGAACAACGAGCCCTCCATCAAGTTCTACAAGCGTCGCGGCGCCGAGGACCTGTCCCAGGAGGAGGGCTGGAGGCTCTTCAAGTTCAGCCAGAACAGCCTGTTCAAGATGGCGACTCCTGCTGAGGAATGACTAGACGTGGACAGAGGGGCGCCGGCGGCCGAGGAACCACCAGGGTCAGGGGGCGGAGCCTCCGCAGTCTGAGGTTTCTCTCCACTCAAGAGGATCGGTGGATTCACAAAGGGAATTCTGCTTGGCTGTATTAAAATTCTGCATGTAGTCAACAGGTTATTTATAGATTTTC]

[+] EMBL CA846999             [TATTAAACTGAATGTTCTTGTCGCGACAAAAGCGTCCGGACCCGAGGCTGACTGTGGGGAAATAGCCGAATGAAGAAACAACTGATCTTTCACTTCACATTCAGAGGACTTCAAACCCGAGGAAAAAAGAGTAAAAGAAGAAAATGGACTATAAATTACGGAAGGCTGAACCCAGAGACGTGTCTGACATTTTACGACTGGTGAAGGAACTTGCTAAATACGAAGAATGTGAGAACCAGGTGACTCTGACTGAGAAAGATCTCCTGGAGGATGGATTTGGTGAGACGCCGTTTTACCATTGCCTCATCGCTGAAGTCCAAGAGGAGAACAGCAGTGAGGGCCTGAAGGTGGTGGGCTTTGCCATGTATTATTTCACTTATGACCCCTGGGTGGGGAAGCAGCTCTACTTGGAGGACTTCTACGTGATGGAGCCCTACAGAGGGATGGGAATCGGTTCTGAGGTCCTGCGGCACCTGAGCAACTTGGCCATAAAGATGCGCTGCACAGGCATGATGTTTGTGGTGGCGGAGAACAACGAGCCCTCCATCAAGTTCTACAAGCGTCGCGGCGCCGAGGACCTGTCCCAGGAGGAGGGCTGGAGGCTCTTCAAGTTCAGCCAGAACAGCCTGTTCAAGATGGCGACTCCTGCTGAGGAATGACTAGACGTGGACAGAGGGGCGCCGGCGGCCGAGG                                                                                                                                          ]
[+] EMBL FR0056451            [                                           GAGGCTGACTGTGGGGAAATAGCCGAATGAAGAAACAACTGATCTTTCACTTCACATTCAGAGGACTTCAAACCCGAGGAAAAAAGAGTAAAAGAAGAAAATGGACTATAAATTACGGAAGGCTGAACCCAGAGACGTGTCTGACATTTTACGACTGGTGAAGGAACTTGCTAAATACGAAGAATGTGAGAACCAGGTGACTCTGACTGAGAAAGATCTCCTGGAGGATGGATTTGGTGAGACGCCGTTTTACCATTGCCTCATCGCTGAAGTCCAAGAGGAGAACAGCAGTGAGGGCCTGAAGGTGGTGGGCTTTGCCATGTATTATTTCACTTATGACCCCTGGGTGGGGAAGCAGCTCTACTTGGAGGGACTCTACGTGATGGAGCCCTACA                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL FR0057022            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTCCTGCGGCACCTGAGCAACTTGGCCATAAAGATGCGCTGCACAGGCATGATGTTTGTGGTGGCGGTGAACAACGAGCCCTCCATCAAGTTCTACAAGCGTCGCGGCGCCGAGGACCTGTCCCAGGAGGAGGGCTGGAGGCTCTTCAAGTTCAGCCAGAACAGCCTGTTCAAGATGGCGACTCCTGCTGAGGAATGACTAGACGTGGACAGAGGGGCGCCGGCGGTCGAGGAACCACCAGGGTCAGGGGGCGGAGCCTCCGCAGTCTGAGGTTTCTCTCCACTCAAGAGGATCGGTGGATTCACAAAGGGAATTCTGCTTGGCTGTATTAAAATTCTGCATGTAGTCAACAGGTTATTTATAGATTTTC]




>consensus_1726#0
TATTAAACTGAATGTTCTTGTCGCGACAAAAGCGTCCGGACCCGAGGCTGACTGTGGGGA
AATAGCCGAATGAAGAAACAACTGATCTTTCACTTCACATTCAGAGGACTTCAAACCCGA
GGAAAAAAGAGTAAAAGAAGAAAATGGACTATAAATTACGGAAGGCTGAACCCAGAGACG
TGTCTGACATTTTACGACTGGTGAAGGAACTTGCTAAATACGAAGAATGTGAGAACCAGG
TGACTCTGACTGAGAAAGATCTCCTGGAGGATGGATTTGGTGAGACGCCGTTTTACCATT
GCCTCATCGCTGAAGTCCAAGAGGAGAACAGCAGTGAGGGCCTGAAGGTGGTGGGCTTTG
CCATGTATTATTTCACTTATGACCCCTGGGTGGGGAAGCAGCTCTACTTGGAGGGACTCT
ACGTGATGGAGCCCTACAGAGGGATGGGAATCGGTTCTGAGGTCCTGCGGCACCTGAGCA
ACTTGGCCATAAAGATGCGCTGCACAGGCATGATGTTTGTGGTGGCGGAGAACAACGAGC
CCTCCATCAAGTTCTACAAGCGTCGCGGCGCCGAGGACCTGTCCCAGGAGGAGGGCTGGA
GGCTCTTCAAGTTCAGCCAGAACAGCCTGTTCAAGATGGCGACTCCTGCTGAGGAATGAC
TAGACGTGGACAGAGGGGCGCCGGCGGCCGAGGAACCACCAGGGTCAGGGGGCGGAGCCT
CCGCAGTCTGAGGTTTCTCTCCACTCAAGAGGATCGGTGGATTCACAAAGGGAATTCTGC
TTGGCTGTATTAAAATTCTGCATGTAGTCAACAGGTTATTTATAGATTTTC

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)