Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 1883 cluster # 1883       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1883#0 length = 614 sequences # 3  
consensusID : consensus_1883#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 614
fasta sequence 
                              [GAGCATCTATTGCCCTCGTCTACTAACTACATTCTGGCATCATGATTAAAAAGTTTGACAAGAAGGACGAGGAGTCTGGAAGCGGGTCAGACCCTTTCCAGAATCTTGAGAAGAGTGCTGTCTTGCAGGAGGCACGTATTTTCAATGAGACTCCCATCAACCCACGAAGATGCCTGCATATTCTGACCAAGATTATTTACCTCCTGAACCAGGGGGAGCATTTTGGGACCACAGAGGCCACTGAGGCTTTCTTTGCAATGACCAGGCTCTTTCAGTCAAACGATCAAACCCTGAGGAGGATGTGCTACCTGACCATTAAAGAGATGGCCAACATCTCTGAGGATGTCATCATTGTCACTA-GCAGCCTAACTAAAGACATGACTGGGAAGGAAGATGTTTACCGGGGACCTGCCATCCGAGCCCTGTGCAGGATTACAGATACGACCATGTTACAAGCCATTGAGCGATACATGAAGCAGGCTATTGTTGACAAGGTTCCCAGTGTTTCCAGTTCCGCCCTGGTCTCCTCTCTGCACATGGTGAAGATGAGCTACGATGTGGTGAAGCGNTGGGTGAATGAAGCTCANGAGGCTGCTTCCAGTGATAACATCATG]

[+] EMBL CA589113             [GAGCATCTATTGCCCTCGTCTACTAACTACATTCTGGCATCATGATTAAAAAGTTTGACAAGAAGGACGAGGAGTCTGGAAGCGGGTCAGACCCTTTCCAGAATCTTGAGAAGAGTGCTGTCTTGCAGGAGGCACGTATTTTCAATGAGACTCCCATCAACCCACGAAGGTGCCTGCATATTCTGACCAAGATTATTTACCTCCTGAACCAGGGGGAGCATTTTGGGACCACAGAGGCCACTGAGGCTTTCTTTGCAATGACCAGGCTCCTTCAGTCAAACGATCAAACCCTGAGGAGGATGTGCTACCTGACCATTAAAGAGATGGCCAACATCTCTGAGGATGTCATCATTGTCACTA GCAGCCTAACTAAAGACATGACTGGGAAGGAAGATGTTTACCGGGGACCTGCCATCCGAGCCCTGTGCAGGATTACAGATACGACCATGTTACAAGCCATTGAGCGATACATGAAGCAGGCTATTGTTGACAAGGTTCCCAGTGTTTCCAGTTCCGCCCTGGTCTCCTCTCTGCACATGGTGAAGATGAGCTACGATGTGGTGAAGCGNTGGGTGAATGAAGCTCAGGAGGCTGCT                  ]
[+] EMBL CA590490             [               TCGTCTACTAACTACATTCTGGCATCATGATTAAAAAGTTTGACAAGAAGGACGAGGAGTCTGGAAGCGGGTCAAACCCTTTCCAGAATCTTGAGAAGAGTGCTGTCTTGCAGGAGGCACGTATTTTCAATGAGACTCCCATCAACCCACGAAGATGCCTGCATATTCTGACCAAGATTATTTACCTCCTGAACCAGGGGGAGCATTTTGGGACCACAGAGGCCACTGAGGCTTTCTTTGCAATGACCAGGCTCTTTCAGTCAAACGATCAAACCCTGAGGAGGATGTGCTACCTGACCATTAAAGAGATGGCCAACATCTCTGAGGATGTCATCATTGTCACTA GCAGCCTAACTAAAGACATGACTGGGAAGGAAGATGTTTACCGGGGACCTGCCATCCGAGCCCTGTGCAGGATTACAGATACGACCATGTTACAAGCCATTGAGCGATACATGAAGCAGGCTATTGTTGACAAGGTTCCCAGTGTTTCCAGTTCCGCCCTGGTCTCCTCTCTGCACATGGTGAAGATGAGCTACGATGTGGTGAAGCGTTGGGTGAATGAAGCTCANGAGGCTGCTTCCAGTGATAACATCATG]
[+] EMBL CA588333             [                                                                                                   AGAATNTTGAGAAGAGTGTCGCCTTGCAGGAGGCACGNATTTTCAATGAGACTCCCATCAACCCACGAAGATGCCTGCATATTCTGAGCAAAATTATTTACCTGCTGAAGCAGGGGGAGCATTTTGGGACCACAGAGGCCACTGAGGCTTTCTTTGCAATGACGAGGCTCTTTCAGACAAACGATCAAACCCTGAGGAGGATGGGCTACCTGACCATGAAAGAGATGGCCAACATCTCAGAGGATGTGATCATGGGCACTAGGGAGGCTAACTAAAGACATGACTGGGAAGGAAGATG TGACCGGGGACGTGCGATCCGAGGCGTGAGGAGGATTACAGATACG                                                                                                                                                                           ]




>consensus_1883#0
GAGCATCTATTGCCCTCGTCTACTAACTACATTCTGGCATCATGATTAAAAAGTTTGACA
AGAAGGACGAGGAGTCTGGAAGCGGGTCAGACCCTTTCCAGAATCTTGAGAAGAGTGCTG
TCTTGCAGGAGGCACGTATTTTCAATGAGACTCCCATCAACCCACGAAGATGCCTGCATA
TTCTGACCAAGATTATTTACCTCCTGAACCAGGGGGAGCATTTTGGGACCACAGAGGCCA
CTGAGGCTTTCTTTGCAATGACCAGGCTCTTTCAGTCAAACGATCAAACCCTGAGGAGGA
TGTGCTACCTGACCATTAAAGAGATGGCCAACATCTCTGAGGATGTCATCATTGTCACTA
GCAGCCTAACTAAAGACATGACTGGGAAGGAAGATGTTTACCGGGGACCTGCCATCCGAG
CCCTGTGCAGGATTACAGATACGACCATGTTACAAGCCATTGAGCGATACATGAAGCAGG
CTATTGTTGACAAGGTTCCCAGTGTTTCCAGTTCCGCCCTGGTCTCCTCTCTGCACATGG
TGAAGATGAGCTACGATGTGGTGAAGCGNTGGGTGAATGAAGCTCANGAGGCTGCTTCCA
GTGATAACATCATG

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)