Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 1894 cluster # 1894       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1894#0 length = 1022 sequences # 3  
consensusID : consensus_1894#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1022
fasta sequence 
                              [ATGTAATCACCATGCGTCTGATGAGGAGGGAAAAGGGCTCTTTGGTGGCAATGCCCAGCTCTCAGTGGGAGAAGGTAGAGGAACCAGTTCGCTTCGGAGATACTCGTCTTAGCCCGTATTCAAAGCTGCTGCTGACTTCGCCGTCGCAGGCTCTGAGGATGGTGGAGGAAGAGAAGGCTGTCCTGCAGGCGCAGCTCAGCCTGGAAGACGATGCTCAGGGCTGCTTCATCCAGAGCGCCCTCTGCCTGCTGAAGGAGCGAGAAGAAATGCTGCTGAAGCAGCAGAAGGTGAACTCCCCCGATGTTCTCAAGATGTCATCTCTTACTCTGGAGGAAGAGTCTTCTTCTGTGGTGGACGTCCCAACAAAGACAAGCAGCTCCAAGGCGGTGCTGGAGTACTCCTCTGCCTTCGATGACCTTGTGATGGCGGCTTCAGAAGTGGCCCCTGCAGAGCCACCAACCTCACCTCAAGACATTCTGGAATGTGTGTTAGAAGAACCTCCAGAGGCTATGATGGATCCAACTCCAGAACTAGAGAAAGCTGAGGAGAAGTCGGGTCGGGCCCCATCAACTGTGGTGCACGGACCTAACTACTACTTCTATCAAGCCGACGACTGCCAGCAAATGTTCCTCCATCCTGTGAACATTCGCTGTTTGCTGCGTGAGTACGGCAGCCTGGAGGCCAGTCCGGACTACATCACCGCAGCGGTGGTGGAGATAGTCGGGCACACGGTCACTGAGGAGATCCGTCGTCGACATCGCTATCTGGCTCACCTGCCGCTCACCTGTGAGTTCAGCATCTGCGAGTTGGTGCTGCAGCCGCCGGTTCTGTCCAAGGAAACTCTGGAGACGTTTGCAGATGAGCTGGAGAAGCGGAAGCGCATGAGGCAGAAGAAGTTAAGGGAGGAGAAGCGTCGCGAGAAGAGGATCGAGATGGAGGAGAACAAGAAGCAGGGGAAATATCCCGAGGTCCATATCGGATTAGAGAACCTCCAGCATTTCCCAGCCTTCGGGTCTCCTCCT]

[+] EMBL BU807981             [ATGTAATCACCATGCGTCTGATGAGGAGGGAAAAGGGCTCTTTGGTGGCAATGCCCAGCTCTCAGTGGGAGAAGGTAGAGGAACCAGTTCGCTTCGGAGATACTCGTCTTAGCCCGTATTCAAAGCTGCTGCTGACTTCGCCGTCGCAGGCTCTGAGGATGGTGGAGGAAGAGAAGGCTGTCCTGCAGGCGCAGCTCAGCCTGGAAGACGATGCTCAGGGCTGCTTCATCCAGAGCGCCCTCTGCCTGCTGAAGGAGCGAGAAGAAATGCTGCTGAAGCAGCAGAAGGTGAACTCCCCCGATGTTCTCAAGATGTCATCTCTTACTCTGGAGGAAGAGTCTTCTTCTGTGGTGGACGTCCCAACAAAGACAAGCAGCTCCAAGGCGGTGCTGGAGTACTCCTCTGCCTTCGATGACCTTGTGATGGCGGCTTCAGAAGTGGCCCCTGCAGAGCCACCAACCTCACCTCAAGACATTCTGGAATGTGTGTTAGAAGAACCTCCAGAGGCTATGATGGATCCAACTCCAGAACTAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA846018             [                                                                                                                                                                                                                 ccTTTTCAGGGCTGCTTCATCCAGAGCGCCCTCTGCCTGCTGCATGAGCGAGAAGAAATGCTGCTGAAGCAGCAGAAGGTGAACTCCCCCGATGTTCTCAAGATGTCATCTCTTACTCTGGAGGAAGAGTCTTCTTCTGTGGTGGACGTCCCAACAAAGACAAGCAGCTCCAAGGCGGTGCTGGAGTACTCCTCTGCCTTCGATGACCTTGTGATGGCGGCTTCAGAAGTGGCCCCTGCAGAGCCACCAACCTCACCTCAAGACATTCTGGAATGTGTGTTAGAAGAACCTCCAGAGGCTATGATGGATCCAACTCCAGAACTAGAGAAAGCTGAGGAGAAGTCGGGTCGGGCCCCATCAACTGTGGTGCACGGACCTAACTACTACTTCTATCAAGCCGACGACTGCCAGCAAATGTTCCTCCATCCTGTGAACATTCGCTGTTTGCTGCGTGAGTACGGCAGCCTGGAGGCCAGTCCGGACTACATCACCGCAGCGGTGGTGGAGATAGTCGGGCACACGGTCACTGAGGAGATCCGTCGTCGACATCGCTATCTGGCTCACCTGCCGCTCACCTGTGAGTTCAGCATCTGCGAGTTGGTGCTGCAGCCGCCGGTTCTGTCCAAGGAAACTCTGGAGACGTTTGCAGATGAGCTGGAGAAGCGGAAGCGCATGAGGCAGAAGAAGTTAAGGGAGGAGAAGCGTCGCGAGAAGAGGATCGAGATGGAGGAGAACAAGAAGCAGGGGAAATATCCCGAGGTCCATATCGGATTAGAGAACCTCCAGCATTTCCCAGCCTTCGGGTCTCCTCCT]
[+] EMBL BU808284             [                                                                                                                                                                                                                            CTGCTTCATCCAGAGCGCCCTCTGCCTGCTGAAGGAGCGAGAAGAAATGCTGCTGAAGCAGCAGAAGGTGAACTCCCCCGATGTTCTCAAGATGTCATCTCTTACTCTGGAGGAAGAGTCTTCTTCTGTGGTGGACGTCCCAACAAAGACAAGCAGCTCCAAGGCGGTGCTGGAGTACTCCTCTGCCTTCGATGACCTTGTGATGGCGGCTTCAGAAGTGGCCCCTGCAGAGCCACCAACCTCACCTCAAGACATTCTGGAATGTGTGTTAGAAGAACCTCCAGAGGCTATGATGGATCCAACTCCAGAACTAGAGAAAGCTGAGGAGAAGTCGGGTCGGGCCCCATCAACTGTGGTGCACGGACCTAACTACTACTTCTATCAAGCCGACGACTGCCAGCAAATGTTCCTCCATCCTGTGAACATTCGCTGTTTGCTGCGTGAGTACGGCAGCCTGGAGGCCAGTCCGGACTACATCACCGCAGCGGTGGTGGAGATAGTCGGGCACACGGTCACTGAGGAGATCCGTCGTCGACATCGCTATCTGGCTCACCTGCCGCTCACCTGTGAGTTCAGCATCTGCGAGTTGGTGCTGCAGCCGCCGGTTCTGTCCAAGGAAACTCTGGAGACG                                                                                                                                                                           ]




>consensus_1894#0
ATGTAATCACCATGCGTCTGATGAGGAGGGAAAAGGGCTCTTTGGTGGCAATGCCCAGCT
CTCAGTGGGAGAAGGTAGAGGAACCAGTTCGCTTCGGAGATACTCGTCTTAGCCCGTATT
CAAAGCTGCTGCTGACTTCGCCGTCGCAGGCTCTGAGGATGGTGGAGGAAGAGAAGGCTG
TCCTGCAGGCGCAGCTCAGCCTGGAAGACGATGCTCAGGGCTGCTTCATCCAGAGCGCCC
TCTGCCTGCTGAAGGAGCGAGAAGAAATGCTGCTGAAGCAGCAGAAGGTGAACTCCCCCG
ATGTTCTCAAGATGTCATCTCTTACTCTGGAGGAAGAGTCTTCTTCTGTGGTGGACGTCC
CAACAAAGACAAGCAGCTCCAAGGCGGTGCTGGAGTACTCCTCTGCCTTCGATGACCTTG
TGATGGCGGCTTCAGAAGTGGCCCCTGCAGAGCCACCAACCTCACCTCAAGACATTCTGG
AATGTGTGTTAGAAGAACCTCCAGAGGCTATGATGGATCCAACTCCAGAACTAGAGAAAG
CTGAGGAGAAGTCGGGTCGGGCCCCATCAACTGTGGTGCACGGACCTAACTACTACTTCT
ATCAAGCCGACGACTGCCAGCAAATGTTCCTCCATCCTGTGAACATTCGCTGTTTGCTGC
GTGAGTACGGCAGCCTGGAGGCCAGTCCGGACTACATCACCGCAGCGGTGGTGGAGATAG
TCGGGCACACGGTCACTGAGGAGATCCGTCGTCGACATCGCTATCTGGCTCACCTGCCGC
TCACCTGTGAGTTCAGCATCTGCGAGTTGGTGCTGCAGCCGCCGGTTCTGTCCAAGGAAA
CTCTGGAGACGTTTGCAGATGAGCTGGAGAAGCGGAAGCGCATGAGGCAGAAGAAGTTAA
GGGAGGAGAAGCGTCGCGAGAAGAGGATCGAGATGGAGGAGAACAAGAAGCAGGGGAAAT
ATCCCGAGGTCCATATCGGATTAGAGAACCTCCAGCATTTCCCAGCCTTCGGGTCTCCTC
CT

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)