Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 1951 cluster # 1951       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1951#0 length = 787 sequences # 4  

consensusID : consensus_1951#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 787
fasta sequence
                              [GGCTGACACGAATGATCCACTGTCAGATGACGAGAAGGTGAGCGTAGTCACCACCTTTGTGACCCATGCTCCACCAGGAGAGTTCAACGAGGTCTTCA-ATGATGTGCGGGTTCTTCTCAGCAATGATAACCTCCTTAAGGAGGGAGCATCACAGGCTTTTGCCAAATACAACATGGATCAATTTACTCCCGTCAGACTAGAGGGCTATGATGAGCCAGTCCTGATCACAAAGCATGGTGCCCTGGAGCAGGGGCGGTTTTTGGACCCCCGAAACTGCTTGTCTTTTTGCTTTGACTACCTC-AAAAAAGAAGTGAGTGACGTGCAGCCATACGATGGAGAAATTCCCCTGAAGAGCTGGAGAAATGCCATCGATTCCGCCCTCAGCGGCTACGTGAAAGAGCACTACCCCACCGGGGGCTGCACAGTATACACAAACACAGATGATGGCGAGGAGTCAATCATAGCCTGCATTGAAGGGCATCAGTTTCAACCCCATAATTACTGGAATGGTTGCTGCAGGTCCGAGTGGAGGCTGACCCTCGGACAGCCTACTGGTCAGGTGGCTGGAGTGTTGAAAATCCNGGTTCACTTCTATGAAGATGGCAATGTGCAGCTGGTTAGCCATAAGGATGTAGCAGAATCAGTAACAGTGACTAACCCAAGCCAGACAGCCCTGGAATTTGTCAAAATCATCATGAGGGAGGAGGATGATTACCAGACTGCCATCAGTAAGAACTACCAGACCATGTCTGACACCACCTTTAAGGCCCTGCGACGCCAGCTGCCT]

[+] EMBL CA846311             [GCCTGACACGAATGATCCACTGTCAGATGACGAGAAGGTGAGCGTAGTCACCACCTTTGTGACCCATGCTCCACCAGGAGAGTTCAACGAGGTCTTCA ATGATGTGCGGGTTCTTCTCAGCAATGATAACCTCCTTAAGGAGGGAGCATCACAGGCTTTTGCCAAATACAACATGGATCAATTTACTCCCGTCAGACTAGAGGGCTATGATGAGCCAGTCCTGATCACAAAGCATGGTGCCCTGGAGCAGGGGCGGTTTTTGGACCCCCGAAACTGCTTGTCTTTTTGCTTTGACTACCTC AAAAAAGAAGTGAGTGACGTGCAGCCATACGATGGAGAAATTCCCCTGAAGAGCTGGAGAAATGCCATCGATTCCGCCCTCAGCGGCTACGTGAAAGAGCACTACCCCACCGGGGGCTGCACAGTATACACAAACACAGATGATGGCGAGGAGTCAATCATAGCCTGCATTGAAGGGCATCAGTTTCAACCCCATAATTACTGGAATGGTTGCTGCAGGTCCGAGTGGAGGCTGACCCTCGGACAGCCTACTGGTCAGGTGGCTGGAGTGTTGAAAATCCAGGTTCACTTCTATGAAGATGGCAATGTGCAGCTGGTTAGCCATAAGGATGTAGCAGAATCAGTAACAGTGACTAACCCAAGCCAGACAGCCCTGGAATTTGTCAAAATCATCATGAGGGAGGAGGATGATTACCAGACTGCCATCAGTAAGAACTACCAGACCATGTCTGACACCACCTTTAAGGCCCTGCGACGCCAGCTGCCT]
[+] EMBL BU807730             [GGCTGACACGAATGATCCACTGTCAGATGACGAGAAGGTGAGCGTAGTCACCACCTTTGTGACCCATGCTCCACCAGGAGAGTTCAACGAGGTCTTCA ATGATGTGCGGGTTCTTCTCAGCAATGATAACCTCCTTAAGGAGGGAGCATCACAGGCTTTTGCCAAATACAACATGGATCAATTTACTCCCGTCAGACTAGAGGGCTATGATGAGCCAGTCCTGATCACAAAGCATGGTGCCCTGGAGCAGGGGCGGTTTTTGGACCCCCGAAACTGCTTGTCTTTTTGCTTTGACTACCTC AAAAAAGAAGTGAGTGACGTGCAGCCATACGATGGAGAAATTCCCCTGAAGAGCTGGAGAAATGCCATCGATTCCGCCCTCAGCGGCTACGTGAAAGAGCACTACCCCACCGGGGGCTGCACAGTATACACAAACACAGATGATGGCGAGGAGTCAATCATAGCCTGCATTGAAGGGCATCAGTTTCAACCCCATAATTACTGGAATGGTTGCTGCAGGTCCGAGTGGAGGCTGACCCTCGGACAGCCTACTGGTCAGGTGGCTGGAGTGTTGAAAATCCNAGTTCACTTCTATGAAGATGGCAATGTGCAGCTGGTTAGCCATAAGGATGTAGCA                                                                                                                                                      ]
[+] EMBL CA333207             [GGCCGACACGAATGATCCACTGTCAGATGACGAGAAGGTGAGCGTAGTCACCACCTTTGTGACCCATGCTCCACCAGGAGAGTTCAACGAGGTCTTCA ATGATGTGCGGGTTCTTCTCAGCAATGATAACCTCCTTAAGGAGGGAGCATCACAGGCTTTTGCCAAATACAACATGGATCAGTTTACTCCCGTCAGACTAGAGGGCTATGATGAGCCAGTCCTGATCACAAAGCATGGTGCCCTGGAGCAGGGGCGGTTTTTGGACCCCCGAAACTGCTTGTCTTTTTGCTTTGACTACCTCAAAAAAAGAAGTGAGTGACGTGCAGCCATACGATGGAGAAATTCCCCTGAAGAGCTGGAGAAATGCCATCGATTCCGCCCTCAGCGGCTACGTGAAAGAGCACTACCCCACCGGGGGCTGCACAGTATACACAAACACAGATGATGGCGAGGAGTCAATCATAGCCTGCATTGAAGGGCATCAGTTTCAACCCCATAATTACTGGAATGGTTGCTGCAGGTCCGAGTGGAGGCTGACCCTCG                                                                                                                                                                                                                                                     ]
[+] EMBL FR0060567            [                                                           TGATCCATGCTCCACCAGGAGAGTTCAACGAGGTCTTTATATGATGTGCGGGTTCTTCTCAGCAATGATAACCTCCTTAAGGAGGGAGCATCACAGGCTTTTGCCAAATACAACATGGATCAATTTACTCCCGTCAGACTAGAGGGCTATGATGAGCCAGTCCTGATCACAAAGCATGGTGCCCTGGAGCAGGGGCGTTTTTTGGACCCCCGAAACTGCTTGTCTTTTTGCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]


>consensus_1951#0 GGCTGACACGAATGATCCACTGTCAGATGACGAGAAGGTGAGCGTAGTCACCACCTTTGT GACCCATGCTCCACCAGGAGAGTTCAACGAGGTCTTCAATGATGTGCGGGTTCTTCTCAG CAATGATAACCTCCTTAAGGAGGGAGCATCACAGGCTTTTGCCAAATACAACATGGATCA ATTTACTCCCGTCAGACTAGAGGGCTATGATGAGCCAGTCCTGATCACAAAGCATGGTGC CCTGGAGCAGGGGCGGTTTTTGGACCCCCGAAACTGCTTGTCTTTTTGCTTTGACTACCT CAAAAAAGAAGTGAGTGACGTGCAGCCATACGATGGAGAAATTCCCCTGAAGAGCTGGAG AAATGCCATCGATTCCGCCCTCAGCGGCTACGTGAAAGAGCACTACCCCACCGGGGGCTG CACAGTATACACAAACACAGATGATGGCGAGGAGTCAATCATAGCCTGCATTGAAGGGCA TCAGTTTCAACCCCATAATTACTGGAATGGTTGCTGCAGGTCCGAGTGGAGGCTGACCCT CGGACAGCCTACTGGTCAGGTGGCTGGAGTGTTGAAAATCCNGGTTCACTTCTATGAAGA TGGCAATGTGCAGCTGGTTAGCCATAAGGATGTAGCAGAATCAGTAACAGTGACTAACCC AAGCCAGACAGCCCTGGAATTTGTCAAAATCATCATGAGGGAGGAGGATGATTACCAGAC TGCCATCAGTAAGAACTACCAGACCATGTCTGACACCACCTTTAAGGCCCTGCGACGCCA GCTGCCT



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)