Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2070 cluster # 2070       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2070#0 length = 602 sequences # 4  
consensusID : consensus_2070#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 602
fasta sequence 
                              [CAGACGCCACCGCGGAGGGATTTTACCCTGTAGATTTCCGCTCCGGACGGCCGCAGTTAATCCGAATTTTCCCTGGCTTCTGT-AGTGATTGAGCCGCAGAATAAAGCCGAAGGTCAGATTGATGGCAACGAGCGTCGGACCGGCCATGAACCCGCCGCACGCAGAGGAGCGGGCGGTGTTCACGCAGCTCAAGCCGGTGAGGATGTCGGCGGCGGACAGCGCGGAGGACACATCCGTGTTTGAGGACATCAAACCCCCGATTCAGCTGGAGTTGGACAAATATC-TCCCCCAGGTGGGCAGTTCTCTTCTGAGCCTCTCCACCGACTGTGCCGACAAGAAATACAGGCGGGAAAGCGCCTCCGTGGTGGACGATTTTTTCTCCGAGGAAAAGCCGATAACCCCGTACAGCCTCAACATCAACCTCATCCTTCCCAGCACCGCTCACCTCCGCACGGGCTTGTACCGGCCCAACAGCAAGACCCTTGCACCGCAGCAGATCAAGACAGAGCCGGACCTGGAGGTGCCTTGTTCCATCCCTACGACCACCTCCACTCAGGCGCTGCCTGACTTCACCTCTGTGTTCAACGTTCATCATGTAACCA]

[+] EMBL CA591248             [CAGACGCCACCGCGGAGGGATTTTACCCTGTAGATTTCCGCTCCGGACGGCCGCAGTTAATCCGAATTTTCCCTGGTTTCTGT AGTGATTGAGCCGCAGAATAAAGCCGAAGGTCAGATTGATGGCAACGAGCGTCGGACCGGCCATGAACCCGCCGCACGCAGAGGAGCGGGCGGTGTTCACGCAGCTCAAGTCGGTGAGGATGTCGGCGGCGGACAGCGCGGAGGACACATCCGTGTTTGAGGACATCAAACCCCCGATTCAGCTGGAGTTGGACAAATATC TCCCCCAGGTGGGCAGTTCTCTTCTGAGCCTCTCCACCGACTGTGCCGACAAGAAATACAGGCGGGAAAGCGCCTCCGTGGTGGACGATTTTTTCTCCGAGGAAAAGCCGATAACCCCGTACAGCCTCAACATCAACCTCATCCTTCCCAGCACCGCTCACCTCCGCACGGGCTTGTACCGGCCCAACAGCAAGACCCTTGCACCGCAGCAGATCAAGACAGAGCCGGACCTGGAGGTGCCTTGTTCCATCCCTACGACCACCTCCACTCAGGCGCTGCCTGACTTCACCTCTGTGTTCAACGTTCATCATGTAACCA]
[+] EMBL FR0058909            [         CCGCGGAGGGATTTTACCCTGTATATTTCCGCTCCGGACGGCCGCAGGGGATCCGAATTTTCCCTGGCTTCTGTCCCTGATTGAGCCGCAGAATAAAGCCGAAGGTCAAATTGATGGCAACGAGCGTCGGACCGGCCATGAACCCGCCGCACGCAGAGGAGCGGGCGGTGTTCACGCAGCTCAAGCCGGTGAGGATGTCGGCGGCGGACAGCGCGGAGGACACATCCCTGTTTGAGGACATCAAACCCCCGATTCAGCTGGAGTTGGACAAATATCTTCCCCCAGGGGGCCAGTTC                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA591246             [                GGGATTTTACCCTGTAGATTTCCGCTCCGGACGGCCGCAGTTAATCTGAATTTTCCCTGGTTTCTGT AGTGATTGAGCCGCAGAATAAAGCCGAAGGTCAGATTGATGGCAACGAGCGTCGGACCGGCCATGAACCCGCCGCACGCAGAGGAGCGGGCGGTGTTCACGCAGCTCAAGCCGGTGAGGATGTCGGCGGCGGACAGCGCGGAGGACACATCCGTGTTTGAGGACATCAAACCCCCGATTCAGCTGGAGTTGGACAAATATC TCCCCCAGGTGGGCAGTTCTCTTCTGAGCCTCTCCACCGACTGTGCCGACAAGAAATACAGGCGGGAAAGCGCCTCCGTGGTGGACGATTTTTTCTCCGAGGAAAAGCCGATAACCCCGTACAGCCTCAACATCAACCTCATCCTTCCCAGCACCGCTCACCTCCGCACGGGCTTGTACCGGCCCAACAACAAGACCCTTGCACCGCAGCAGA                                                                                                         ]
[+] EMBL FR0058450            [                                                 GCCGCAGTTAATCCGAATTTTCCCTGGCTTCTGT AGTGATTGAGCCGCAGAATAAAGCCGAAGGTCAGATTGATGGCGACGAGCGTCGGACCGGCCATGAACCCGCCGCACGCAGAGGAGCGGGCGGTGTTCACGCAGCTCAAGCCGGTGAGGATGTCGGCGGCGGACAGCGCGGAGGACACATCCGTGTTTGAGGACATCAAACCCCCGATTCAGCTGGAGTTGGACAAATATC TCCCCCAGGTGGGCAGTTCTCTTCTGAGCCTCTCCACCGACTGTGCCGACAAGAAATACAGGCGGGAAAGCGCCTTCGTGGTGTACGATTTTTTCTCCGAGGAAAAGCCGATAACCCCGT                                                                                                                                                                                                      ]




>consensus_2070#0
CAGACGCCACCGCGGAGGGATTTTACCCTGTAGATTTCCGCTCCGGACGGCCGCAGTTAA
TCCGAATTTTCCCTGGCTTCTGTAGTGATTGAGCCGCAGAATAAAGCCGAAGGTCAGATT
GATGGCAACGAGCGTCGGACCGGCCATGAACCCGCCGCACGCAGAGGAGCGGGCGGTGTT
CACGCAGCTCAAGCCGGTGAGGATGTCGGCGGCGGACAGCGCGGAGGACACATCCGTGTT
TGAGGACATCAAACCCCCGATTCAGCTGGAGTTGGACAAATATCTCCCCCAGGTGGGCAG
TTCTCTTCTGAGCCTCTCCACCGACTGTGCCGACAAGAAATACAGGCGGGAAAGCGCCTC
CGTGGTGGACGATTTTTTCTCCGAGGAAAAGCCGATAACCCCGTACAGCCTCAACATCAA
CCTCATCCTTCCCAGCACCGCTCACCTCCGCACGGGCTTGTACCGGCCCAACAGCAAGAC
CCTTGCACCGCAGCAGATCAAGACAGAGCCGGACCTGGAGGTGCCTTGTTCCATCCCTAC
GACCACCTCCACTCAGGCGCTGCCTGACTTCACCTCTGTGTTCAACGTTCATCATGTAAC
CA

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)