Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2142 cluster # 2142       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2142#0 length = 843 sequences # 4  

consensusID : consensus_2142#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 843
fasta sequence
                              [AGTTCCCCAACTTCGAGGCGAACACAACCATCGGCAGGATCAAGTTCCACGACTTCCTGGGCAGCTCCTGGGGTATTCTCTTTTCCCACCCGAAGGACTTCACCCCTGTCTGCACCACAGAGCTGGCCCGAGCTGCCAAGCTCAGCGGCGAGTTCAAGAAGAGAGATGTGAAGATGATCGCTTTGTCCGTCGACAGTGTTGAGGATCACTGCAGCTGGAGCAAGGATGTGATGGCCTTAAACACTGAGCCTGACAGTCCTCTGCCATACCCCATCATCGCTGATGATAAGAGGCATTTGTCTGTCCAGCTGGGCATGCTGGACCCTGATGAGCTGGATAAGGATGGAATCCCCCTCACGGCTCGCTGCGTGTTTGTGATTGGGCCGGACAAGAAGCTGAAGCTGTCCATCCTCTACCCCGCGACCACGGGAAGGAACTTCGACGAGCTGCTCCGCGTGATCGACTCCCTGCAGCTCACTGCGCAGAAGAAGGTGGCCACACCTGTAGATTGGAAGCCAGGTGACAAGGTCATGGTCATCCCCTCGCTCTCAGACGCTGAAGCTGCTGCTCTCTTTCCCAGCGGCGTGACCACTAAACCCATGCCTTCCGGGAAGTCGTACCTGCGCTACACCCAGCCCTGAATCATCACTCTTGAATTGATCTGACACGTTGATGGGTTAAATATAGAGCTAACAATGGGCAACTTGGCTAGGTGGTTGGTTTTTTTTGCTTTTCTCAAGTTGTACAACATTTCATTCTAGCAGGATTCATTAAAGAGCTGTATTCCAGTGCCTTGTTTACCTCCTTATAATAAACACACGCACACAGGAATTCAAAAGGGAT]

[+] EMBL CA847099             [AGTTCCCCAACTTCGAGGCGAACACAACCATCGGCAGGATCAAGTTCCACGACTTCCTGGGCAGCTCCTGGGGTATTCTCTTTTCCCACCCGAAGGACTTCACCCCTGTCTGCACCACAGAGCTGGCCCGAGCTGCCAAGCTCAGCGGCGAGTTCAAGAAGAGAGATGTGAAGATGATCGCTTTGTCCGTCGACAGTGTTGAGGATCACTGCAGCTGGAGCAAGGATGTGATGGCCTTAAACACTGAGCCTGACAGTCCTCTGCCATACCCCATCATCGCTGATGATAAGAGGCATTTGTCTGTCCAGCTGGGCATGCTGGACCCTGATGAGCTGGATAAGGATGGAATCCCCCTCACGGCTCGCTGCGTGTTTGTGATTGGGCCGGACAAGAAGCTGAAGCTGTCCATCCTCTACCCCGCGACCACGGGAAGGAACTTCGACGAGCTGCTCCGCGTGATCGACTCCCTGCAGCTCACTGCG                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL FR0057058            [                               CGGCAGGATCAAGTTCCACGACTTCCTGGGCAGCTCCTGGGGTATTCTCTTTTCCCACCCGAAGGACTTCACCCCTGTCTGCACCACAGAGCTGGCCCGAGCTGCCAAGCTCAGCGGCGAGTTCAAGAAGAGAGATGTGAAGATGATCGCTTTGTCCGTCGACAGTGTTGAGGATCACTGCAGCTGGAGCAAGGATGTGATGGCCTTAAACACTGAGCCTGACAGTCCTCTGCCATACCCCATCATCGCTGATGATAAGAGGCATTTGTCTGTCCAGCTGGGCATGCTGGACCCTGATGAGCTGGATAAGGATGGAATCCCCCTCACGGCTCGCTGCGTGTTTGTGATTGGCCCGGACAAGAAGCTGAAGCTGTCCATCCTCTACCCCGCGACCACGGGAAGGAACTTCGACGAGCTGCTCCGCGTGATCGACTCCCTGCAGCTCACTGCGCAGAAGAATGTGGCCACACCTGTAGATTGGAAG CAGGTGACAAGGTC                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL FR0055123            [                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTCGACGAGCTGCTCCGCGTGATCGACTCCCTGCAGCTCACTGCGCAGAAGAAGGTGGCCACACCTGTAGATTGGAAGCCAGGTGACAAGGTCATGGTCATCCCCTCGCTCTCAGACGCTGAAGCTGCTGCTCTCTTTCCCAGCGGCGTGACCACTAAACCCATGCCTTCCGGGAAGTCGTACCTGCGCTACACCCAGCCCTGAATCATCACTCTTGAATTGATCTGACACGTTGATGGGTTAAATATAGAGCTAACAATGGGCAACTTGGCTAGGTGGTTTGTTTTTTTTGCTTTTCTCAAGTTGTACAACATTTCATTCTAGCAGGATTCATTAAAGAGCTGTATTCCAGTGCCTTGTTTACCTCCTTATAATAAACACACGCACACAGGAATTCAAAAGGGAT]
[+] EMBL CA847034             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGATTTTTTTTGCTTTTCTCAAGTTGTACAACATTTCTTTCTAGCAGGATTCATTAAAGAGCTGTATTCCAGTGCCTTGTTTACCTCCTTATAATAAACACACGCACACA                ]


>consensus_2142#0 AGTTCCCCAACTTCGAGGCGAACACAACCATCGGCAGGATCAAGTTCCACGACTTCCTGG GCAGCTCCTGGGGTATTCTCTTTTCCCACCCGAAGGACTTCACCCCTGTCTGCACCACAG AGCTGGCCCGAGCTGCCAAGCTCAGCGGCGAGTTCAAGAAGAGAGATGTGAAGATGATCG CTTTGTCCGTCGACAGTGTTGAGGATCACTGCAGCTGGAGCAAGGATGTGATGGCCTTAA ACACTGAGCCTGACAGTCCTCTGCCATACCCCATCATCGCTGATGATAAGAGGCATTTGT CTGTCCAGCTGGGCATGCTGGACCCTGATGAGCTGGATAAGGATGGAATCCCCCTCACGG CTCGCTGCGTGTTTGTGATTGGGCCGGACAAGAAGCTGAAGCTGTCCATCCTCTACCCCG CGACCACGGGAAGGAACTTCGACGAGCTGCTCCGCGTGATCGACTCCCTGCAGCTCACTG CGCAGAAGAAGGTGGCCACACCTGTAGATTGGAAGCCAGGTGACAAGGTCATGGTCATCC CCTCGCTCTCAGACGCTGAAGCTGCTGCTCTCTTTCCCAGCGGCGTGACCACTAAACCCA TGCCTTCCGGGAAGTCGTACCTGCGCTACACCCAGCCCTGAATCATCACTCTTGAATTGA TCTGACACGTTGATGGGTTAAATATAGAGCTAACAATGGGCAACTTGGCTAGGTGGTTGG TTTTTTTTGCTTTTCTCAAGTTGTACAACATTTCATTCTAGCAGGATTCATTAAAGAGCT GTATTCCAGTGCCTTGTTTACCTCCTTATAATAAACACACGCACACAGGAATTCAAAAGG GAT



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)