Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2159 cluster # 2159       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2159#0 length = 697 sequences # 4  

consensusID : consensus_2159#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 697
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAGGCCCACTAACATTTTATTTCAATTCACCGAAAATTTATTGTCAGAATT-AAGGAGCACAATAATTTATTTCGTCCCAGGGATAAAAAAAAGTGTTTAATTTATAAAGTTAGCACTGAAACGGATGTTGTGGATGAACGTGTATTGACAATTTGTTGGGTGTGCTCAGTTCATTATGACTGATCAGTTGTTTTGCCTTCTGAGCTGAGCAGACATGTTTTTGCAATGGCCATTGTAACACAATACGGGTCACAGTTAGCTGATGGTCGGCGATCCTCGAAGTAACCTTTCATTTCCTGGGCTACCTGGCGAGGGATGCGGATGCTGGAGCCCCTGTTGGCCACACCAGCTGAGAAATCTTCAATGCTGGAGGTTTCATGGCGACCTGTGAGACGCCTTTTGTTGTCGTTTCCCTCATGTGGGTCATATGCACGGATATGTTCGCTGTGTTTTGTGCTCAGCTTCTCGATGGCTTGTTCGATGTACTTGAGTCCGTCTTCTTCCCTCATCTGCAAGGTGCTGACATTTGTGTGGCACCCGGCGCCGTTCCAGTTGCCCTCCATTGGTTTGGGGTCCAGTGATGCAATAATTCCGAAATCTTCACACACCCGGTGCAGCAAGTAACGGGCAATCCAGAGGTGGTCGGCCATGTCGATGCCCTCAC]

[-] EMBL BU805693             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAGGCCCACTAACATTTTATTTCAATTCACCGAAAATTTATTGTCAGAATTAAAGGAGCACAATAATTTATTTCGTCCCAGGGATAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA332478             [                           TTTTTAAAGGCCCACTAACATTTTATTTCAATTCACCGAAAATTTATTGTCATAATT CTGGAGCACAATAATTTATTTCGTCCCAGGGATAAAAAAAAGTGTTTAATTTATAAAGTTAGCACTGAAACGGATGTTGTGGATGAACGTGTATTGACAATTTGTTGGGTGTGCTCAGTTCATTATGACTGATCAGTTGTTTTGCCTTCTGAGCTGAGCAAACATGTTTTTGCAATGGCCATTGTAACACAATACGGGTCACAGTTAGCTGATGGTCGGCGATCCTCGAAGTAACCTTTCATTTCCTGGGCTACCTGGCGAGGGATGCGGATGCTGGAGCCCCTGTTGGCCACACCAGCTGAGAAATCTTCAATGCTGGAGGTTTCATGGCGACCTGTGAGACGCCTTTTGTTGTCGTTTCCCTCATGTGGGTCATATGCACGGATATGTTCGCTGTGTTTTGTGCTCAGCTTCTCGATGGCTTGTTCGATGTACTTGAGTCCGTCTTCTTCCCTCCTCTGCAAGGGGCTGACATTTTGGGGGCACCCGGCGCCCTTCCAATTGCCCTCCATTGGTTTGGGGTCCCGTGATGC                                                                                ]
[-] EMBL CA846890             [                                                                                                             CCCAGGGATAAAAAAAAGTGTTTAATTTATAAAGTTAGCACTGAAACGGATGTTGTGGATGAACGTGTATTGACAATTTGTTGGGTGTGCTCAGTTCATTATGACTGATCAGTTGTTTTGCCTTCTGAGCTGAGCAGACATGTTTTTGCAATGGCCATTGTAACACAATACGGGTCACAGTTAGCTGATGGTCGGCGATCCTCGAAGTAACCTTTCATTTCCTGGGCTACCTGGCGAGGGATGCGGATGCTGGAGCCCCTGTTGGCCACACCAGCTGAGAAATCTTCAATGCTGGAGGTTTCATGGCGACCTGTGAGACGCCTTTTGTTGTCGTTTCCCTCATGTGGGTCATATGCACGGATATGTTCGCTGAGTTTTGTGCTCAGCTTCTCGATGGCTTGTTCGATGTACTTGAGTCCGTCTTCTTCCCTCATCTGCAAGGTGCTGACATTTGTGTGGCACCCGGCGCCGTTCCAGTTGCCCTCCATTGGTTTGGGGTCCAGTGATGCAATAATTCCGAAATCTTCACACACCCGGTGCAGCAAGTAACGGGCAATCCAGAGGTGGTCGGCCATGTCGATGCCCTCAC]
[-] EMBL FR0057729            [                                                                                                                                                                                       AATTTGTTGCGTGTGCTCAGTTCATTATGACTGATCAGTTGTCCTGCCTTCTGAGCTGAGCAGACATGTTTTTCCAATGGCCATTGTAACACAATACGGGTCACAGTTAGCTGATGGTCGGCGATCCTCGAAGTAACCTTTCATTTCCTGGGCTACCTGGCGAGGGATGCGGATGCTGGAGCCCCTGTTGGCCACACCAGCTGAGAAATCTTCAATGCTGGAGGTTTCATGGCGACCTGTGAGACGCCTTTTGTTGTCGTTTCCCTCATGTGGGTCATATGCACGGATATGTTCGCTGTGTTTTGTGCTCAGCTTCTCGATGGCTTGTTCGATGTACTTGAGTCCGTCTTCTTCCCTCATCTGCAAGGTGCTGACATTTGTGTGGCACCCGGCGCCGTTCCAGT                                                                                                               ]


>consensus_2159#0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAGGCCCACTAACATTTTATTTCAATT CACCGAAAATTTATTGTCAGAATTAAGGAGCACAATAATTTATTTCGTCCCAGGGATAAA AAAAAGTGTTTAATTTATAAAGTTAGCACTGAAACGGATGTTGTGGATGAACGTGTATTG ACAATTTGTTGGGTGTGCTCAGTTCATTATGACTGATCAGTTGTTTTGCCTTCTGAGCTG AGCAGACATGTTTTTGCAATGGCCATTGTAACACAATACGGGTCACAGTTAGCTGATGGT CGGCGATCCTCGAAGTAACCTTTCATTTCCTGGGCTACCTGGCGAGGGATGCGGATGCTG GAGCCCCTGTTGGCCACACCAGCTGAGAAATCTTCAATGCTGGAGGTTTCATGGCGACCT GTGAGACGCCTTTTGTTGTCGTTTCCCTCATGTGGGTCATATGCACGGATATGTTCGCTG TGTTTTGTGCTCAGCTTCTCGATGGCTTGTTCGATGTACTTGAGTCCGTCTTCTTCCCTC ATCTGCAAGGTGCTGACATTTGTGTGGCACCCGGCGCCGTTCCAGTTGCCCTCCATTGGT TTGGGGTCCAGTGATGCAATAATTCCGAAATCTTCACACACCCGGTGCAGCAAGTAACGG GCAATCCAGAGGTGGTCGGCCATGTCGATGCCCTCAC



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)