Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2207 cluster # 2207       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2207#0 length = 818 sequences # 4  
consensusID : consensus_2207#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 818
fasta sequence 
                              [CGCACAGGCATATCAGCCCTCAAAGTTGATGAAAGTTTTCCCTGCGCGCTTCATACTCAGCCTGGATCACTAACATGACCGGATTCACCAAGTGGTGGCTTTTGTGCGCCGTCTCGCTCTCCTGCGTAGCCCGCTTCGGGTCCTGTTCCAGACGCAGAGAAGCAAACAGAGCACAGCCCGAGCACCTGATCTTCAATGAATTGTGCGCACTGAAGGATGAAAAAGGCCCCTGCAAGGCGATCAAAGACCGATTCTTCTTCAACGTCGACAACGGACACTGCGAACTGTTTGAATACGGAGGCTGTGGAGGAAACGCCAACAATTTTGAGACGTTGGAGGAGTGTGAGGAAACTTGTGTTGTCTCAGACAATAAGACCCCGTGTCATCTGTCGGAGGCCCCCGGCCCCTGCCGAGGCCTGTTGTCGCGCTATTACTATGACAGCAGGAGTCAGCAATGCACGCATTTCTTTTACGGCGGCTGCTTCGGTAATGCCAACAACTTCAGGAGCATGGCGGAGTGCCAGGCCAAATGTCAGAGCCCAGCAAAGCCGACTGAAGACCCAGTTAATCCCATAAAAGAGCAGCCCATTATGGGTCACGGGGAACCGGCTACGTTTGACCATCAGGTGCAGACGAATAACACCAGTCAAGAAGCGACAGATGTGAAACCCACAGACCTGTGTTCCTTTCCCACGGACCCCGGGACATGTGATGGAAAAGAGCGGAGGTTCACGTACAACTCCATCACCAAGAGGTGCCAGGCCTTTATCTACAGCGGCTGCGGGGGGAATGAAAACAACTTCGTTTTCCGCAAAAAC]

[+] EMBL BU808078             [CGCACAGGCATATCAGCCCTCAAAGTTGATGAAAGTTTTCCCTGCGCGCTTCATACTCAGCCTGGATCACTAACATGACCGGATTCACCAAGTGGTGGCTTTTGTGCGCCGTCTCGCTCTCCTGCGTAGCCCGCTTCGGGTCCTGTTCCAGACGCAGAGAAGCAAACAGAGCACAGCCCGAGCACCTGATCTTCAATGAATTGTGCGCACTGAAGGATGAAAAAGGCCCCTGCAAGGCGATCAAAGACCGATTCTTCTTCAACGTCGACAACGGACACTGCGAACTGTTTGAATACGGAGGCTGTGGAGGAAACGCCAACAATTTTGAGACGTTGGAGGAGTGTGAGGAAACTTGTGTTGTCTCAGACAATAAGACCCCGTGCCATCTGTCGGAGGCCCCCGGCCCCTGCCGAGGCCTGTTGTCGCGCTATTACTATGACAGCAGGAGTCAGCAATGCACGCATTTCTTTTACGGCGGCTGCTTCGGTAATGCCAACAACTTCAGGAGCATGGCGGAGTGCCAGGCCAAATGTCAGAGCCCAGCAAAGCCGACTGAAGACCCAGTTAAT                                                                                                                                                                                                                                                         ]
[+] EMBL CA846354             [                    tcATGTTGATGAAAGTTTTCCCTGCGCGCTTCATACTCAGCCTGTATCACTAACATGACCGGATTCACCAAGTGGTGGCTTTTGTGCGCCGTCTCGCTCTCCTGCGTAGCCCGCTTCGGGTCCTGTTCCAGACGCAGAGAAGCAAACAGAGCACAGCCCGAGCACCTGATCTTCAATGAATTGTGCGCACTGAAGGATGAAAAAGGCCCCTGCAAGGCGATCAAAGACCGATTCTTCTTCAACGTCGACAACGGACACTGCGAACTGTTTGAATACGGAGGCTGTGGAGGAAACGCCAACAATTTTGAGACGTTGGAGGAGTGTGAGGAAACTTGTGTTGTCTCAGACAATAAGACCCCGTGTCATCTGTCGGAGGCCCCCGGCCCCTGCCGAGGCCTGTTGTCGCGCTATTACTATGACAGCAGGAGTCAGCAATGCACGCATTTCTTTTACGGCGGCTGCTTCGGTAATGCCAACAACTTCAGGAGCATGGCGGAGTGCCAGGCCAAATGTCAGAGCCCAGCAAAGCCGACTGAAGACCCAGTTAATCCCATAAAAGAGCAGCCCATTATGGGTCACGGGGAACCGGCTACGTTTGACCATCAGGTGCAGACGAATAACACCAGTCAAGAAGCGACAGATGTGAAACCCACAGACCTGTGTTCCTTTCCCACGGACCCCGGGACATGTGATGGAAAAGAGCGGAGGTTCACGTACAACTCCATCACCAAGAGGTGCCAGGCCTTTATCTACAGCGGCTGCGGGGGGAATGAAAACAACTTCGTTTTCCGCAAAAAC]
[+] EMBL CA845024             [                                                                                                          CGCCGTCTCGCTCTCCTGCGTAGCCCGCTTCGGGTCCTGTTCCAGACGCAGAGAAGCAAACAGAGCACAGCCCGAGCACCTGATCTTCAATGAATTGTGCGCACTGAAGGATGAAAAAGGCCCCTGCAAGGCGATCAAAGACCGATTCTTCTTCAACGTCGACAACGGACACTGCGAACTGTTTGAATACGGAGGCTGTGGAGGAAACGCCAACTATTTTGAGACGTTGGAGGAGTGTGAGGAAACTTGTGTTGTCTCAGACAATAAGACCCCGTGTCATCTGTCGGAGGCCCCCGGCCCCTGCCGAGGCCTGTTGTCGCGCTATTACTATGACAGCAGGAGTCAGCAATGCACGCATTTCTTTTACGGCGGCTGCTTCGGTAATGCCAACAACTTCAGGAGCATGGCGGAGTGCCAGGCCAAATGTCAGAGCCCAGCAAAGCCGACTGAAGACCCAGTTAATCCCATAAAAGAGCAGCCCATTATGGGTCACGGGGAACCGGCTACGTTTGACCATCAGGTGCAGACGAATAACACCAGTCAAGAAGCGACAGATGTGAAACCCACAGACCTGTGTTCCTTTCCC                                                                                                                              ]
[+] EMBL CA330598             [                                                                                                          CGCCGTCTCGCTCTCCTGCGTAGCCCGCTTCGGGTCCTGTTCCAGACGCAGAGAAGCAAACAGAGCACAGCCCGAGCACCTGATCTTCAATGAATTGTGCGCACTGAAGGATGAAAAAGGCCCCTGCAAGGCGATCAAAGACCGATTCNNCTCAATCGTCAACAACGGACACTGCGAACTGTTTGAATACGGAGGCTGTGGAGGAAACGCCAACAATTTTGAGACGTTGGAGGAGTGTGAGGAAACTTGTGTTGTCTCAGACAATAAGACCCCGTGTCATCTGTCGGAGGCCCCCGGCCCCTGCCGAGGCCTGTTGTCGCGCTATTACTATGACAGCAGGAGTCAGCAATGCACGCATTTCTTTTACGGCGGCTGCTTCGGTAATGCCAACAACTTCAGGAGCATGGCGGAGTGCCAGGCCAAATGTCAGAGCCCAGCAAAGCCGACTGAAGACCCAGTTAATCCCATAAAAGAGCAGCCCATTATGGGT                                                                                                                                                                                                                              ]




>consensus_2207#0
CGCACAGGCATATCAGCCCTCAAAGTTGATGAAAGTTTTCCCTGCGCGCTTCATACTCAG
CCTGGATCACTAACATGACCGGATTCACCAAGTGGTGGCTTTTGTGCGCCGTCTCGCTCT
CCTGCGTAGCCCGCTTCGGGTCCTGTTCCAGACGCAGAGAAGCAAACAGAGCACAGCCCG
AGCACCTGATCTTCAATGAATTGTGCGCACTGAAGGATGAAAAAGGCCCCTGCAAGGCGA
TCAAAGACCGATTCTTCTTCAACGTCGACAACGGACACTGCGAACTGTTTGAATACGGAG
GCTGTGGAGGAAACGCCAACAATTTTGAGACGTTGGAGGAGTGTGAGGAAACTTGTGTTG
TCTCAGACAATAAGACCCCGTGTCATCTGTCGGAGGCCCCCGGCCCCTGCCGAGGCCTGT
TGTCGCGCTATTACTATGACAGCAGGAGTCAGCAATGCACGCATTTCTTTTACGGCGGCT
GCTTCGGTAATGCCAACAACTTCAGGAGCATGGCGGAGTGCCAGGCCAAATGTCAGAGCC
CAGCAAAGCCGACTGAAGACCCAGTTAATCCCATAAAAGAGCAGCCCATTATGGGTCACG
GGGAACCGGCTACGTTTGACCATCAGGTGCAGACGAATAACACCAGTCAAGAAGCGACAG
ATGTGAAACCCACAGACCTGTGTTCCTTTCCCACGGACCCCGGGACATGTGATGGAAAAG
AGCGGAGGTTCACGTACAACTCCATCACCAAGAGGTGCCAGGCCTTTATCTACAGCGGCT
GCGGGGGGAATGAAAACAACTTCGTTTTCCGCAAAAAC

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)