Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2281 cluster # 2281       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2281#0 length = 943 sequences # 5  
consensusID : consensus_2281#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 943
fasta sequence 
                              [GGGAAGATGAGCTCTTACGCCTTCTTTGTGACGACCTGTCGCGATGAGCACAAGAAG-AACATCCTGGCACCCCTGTGAACTTCTCCGAGTTCTCCAAGAAATGCTCCGAGCGGTGGAAGAATATGTCATCGAAGGAGAAGTCCAAGTTTGAGGAATTGGCGAAGACTGATAAGATTCGCTACGATCAGGAAATGCAGTCCTACGTTCCTCCCAAAGGCAGCAAAGTCAGCAGGAAGAAGAAGAAGGACCCCAATGCTCCAAAAAGGCCACCTTCTGCCTTTTTCGTGTTTTGTTCCGACCACCGGCCCAAAATCAAGGAGGACAACCCTGGCATCTCTATTGGAGACATTGCAAAAAAAGTTGGGAGAACTGTGGTCAACACAGGGTCCTAAAGACAAGGCACCATATGAGGCCAGGGCAGCTAAGCTGAAGGAGAAATACGAGAAGGATGTCGCAGCTTACAAAGCCAAAGGTGGTGTGAGCAAAAACGATGCTGGTAAGAAAAGCGGCCCAGGCAGGCCAGCGGCCAAGAAAGTACAGCCAGAAGATGACGATGATGATGACGACGACGATGATGACGACGAAGATATGGACGATGATGATGATGATGACGATGAATAGGTGTTTGGTGTGGATTTTTCTGTAATGACTCCCAACAGGTTGGCCCGCCTCTTAGGGATTCGTAAATGCGTCAGAATCTTATGTTCGCCAACTTGGGACTGTTTTGATGCAGTTTTAAGGGTTGTTTTTCTAGAAGCACTACCCCTGTCGTGTTCGGTAGTGCTGTTCATCACTGTCATTTTACTGCCGGTTTTCTGTAGACGTTTGCAGCCATTTTTAATATGGAAAGCTAGATTTTTTTTTTGGTAATAAAATTTTGTATATTGATCAGAAAAAAAAAAAAAAAAAAACCCCAGGGGGGGCCCCGGACCCAATTTTTGGT]

[+] EMBL FR0056508            [GGGAAGATGAGCTCTTACGCCTTCTTTGTGACGACCTGTCGCGATGAGCACAAGAAGAAACATCCTGGCACCCCTGTGAACTTCTCCGAGTTCTCCAAGAAATGCTCCGAGCGGTGGAAGAATATGTCATCGAAGGAGAAGTCCAAGTTTGAGGAATTGGCGAAGACTGATAAGATTCGCTACGATCAGGAAATGCAGTCCTACGTTCCTCCCAAAGGCAGCAAAGTCAGCAGGAAGAAGAAGAAGGACCCCAATGCTCCAAAAAGGCCACCTTCTGCCTTTTTCGTGTTTTGTTCCGATCACCGGGCCAAAATCAAGGAGGACAACCCTGGGATCTCTATTGGAGACAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CA844606             [                         TTGTGACGACCTGTCGCGATGAGCACAAGAAG AACATTCTGGCACCCCTGTGAACTTCTCCGAGTTCTCCAAGAAATGCTCCGAGCGGTGGAAGAATATGTCATCGAAGGAGAAGTCCAAGTTTGAGGAATTGGCGAAGACTGATAAGATTCGCTACGATCAGGAAATGCAGTCCTACGTTCCTCCCAAAGGCAGCAAAGTCAGCAGGAAGAAGAAGAAGGACCCCAATGCTCCAAAAAGGCCACCTTCTGCCTTTTTCGTGTTTTGTTCCGACCACCGGCCCAAAATCAAGGAGGACAACCCTGGCATCTCTATTGGAGACATTGC AAAAAAGTTGGGAGAACTGTGGTCAACACAGGGTCCTAAAGACAAGGCACCATATGAGGCCAGGGCAGCTAAGCTGAAGGAGAAATACGAGAAGGATGTCGCAGCTTACAAAGCCAAAGGTGGTGTGAGCAAAAACGATGCTGGTAAGAAAAGCGGCCCAGGCAGGCCAGCGGCCAAGAAAGTACAGCCAGAAGATGACGATGATGATGACGACGACGATGATGACGACGAAGATATGGACG                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA340903             [                                                                                                                                                                                                         TACGTTCCTCCCAAAGGCAGCAAAGTCTGCAGGAAGAAGAAGAAGGACCCCAATGCTCCAAAAAGGCCACCTTCTGCCTTTTTCGTGTTTTGTTCCGACCACCGGCCCAAAATCAAGGAGGACAACCCTGGCATCTCTATTGGAGACATTGCAAAAAAAGTTGGGAGAACTGTGGTCAACACAGGGTCCTAAAGACAAGGCACCATATGAGGCCAGGGCAGCTAAGCTGAAGGAGAAATACGAGAAGGATGTCGCAGCTTACAAAGCCAAAGGTGGTGTGAGCAAAAACGATGCTGGTAAGAAAAGCGGCCCAGGCAGGCCAGCGGCCAAGAAAGTACAGCCAGAAGATGACGATGATGATGACGACGACGATGATGACGACGAAGATATGGACGATGATGATGATGATGACGATGAATAGGTGTTTGGTGTGGATTTTTCTGTAATGACTCCCAACAGGTTGGCCCGCCTCTTAGGGATTCGTAAATGCGTCAGAATCTTATGTTCGCCAACTTGGGACTGTTTTGATGCAGTTTTAAGGGTTGTTTTTCTAGAAGCACTACCCCTGTCGTGTTCGGTAGT                                                                                                                                                                 ]
[+] EMBL FR0056876            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGCGTCAGAATCTTATGTTCGCCAACTTGGGACTGTTTTGATGCAGTTTTAAGGGTTGTTTTTCTAGAAGCACTACCCCTGTCGTGTTCGGTAGTGCTGTTCATCACTGTCATTTTACTGCCGGTTTTCTGTAGACGTTTGCAGCCATTTTTAATATGGAAAGCTAGATTTTTTTTTTGGTAATAAAATTTTGTA                                                             ]
[+] EMBL FR0056373            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAGAATCTTATGTTCGCCAACTTGGGACTGTTTTGATGCAGTTTTAAGGGTTGTTTTTCTAGAAGCACTACCCCTGTCGTGTTCGGTAGTGCTGTTCATCACTGTCATTTTACTGCCGGTTTTCTGTAGACGTTTGCAGCCATTTTTAATATGGAAAGCTAGATTTTTTTTTTGGTAATAAAATTTTGTATATTGATCAGAAAAAAAAAAAAAAAAAAACCCCAGGGGGGGCCCCGGACCCAATTTTTGGT]




>consensus_2281#0
GGGAAGATGAGCTCTTACGCCTTCTTTGTGACGACCTGTCGCGATGAGCACAAGAAGAAC
ATCCTGGCACCCCTGTGAACTTCTCCGAGTTCTCCAAGAAATGCTCCGAGCGGTGGAAGA
ATATGTCATCGAAGGAGAAGTCCAAGTTTGAGGAATTGGCGAAGACTGATAAGATTCGCT
ACGATCAGGAAATGCAGTCCTACGTTCCTCCCAAAGGCAGCAAAGTCAGCAGGAAGAAGA
AGAAGGACCCCAATGCTCCAAAAAGGCCACCTTCTGCCTTTTTCGTGTTTTGTTCCGACC
ACCGGCCCAAAATCAAGGAGGACAACCCTGGCATCTCTATTGGAGACATTGCAAAAAAAG
TTGGGAGAACTGTGGTCAACACAGGGTCCTAAAGACAAGGCACCATATGAGGCCAGGGCA
GCTAAGCTGAAGGAGAAATACGAGAAGGATGTCGCAGCTTACAAAGCCAAAGGTGGTGTG
AGCAAAAACGATGCTGGTAAGAAAAGCGGCCCAGGCAGGCCAGCGGCCAAGAAAGTACAG
CCAGAAGATGACGATGATGATGACGACGACGATGATGACGACGAAGATATGGACGATGAT
GATGATGATGACGATGAATAGGTGTTTGGTGTGGATTTTTCTGTAATGACTCCCAACAGG
TTGGCCCGCCTCTTAGGGATTCGTAAATGCGTCAGAATCTTATGTTCGCCAACTTGGGAC
TGTTTTGATGCAGTTTTAAGGGTTGTTTTTCTAGAAGCACTACCCCTGTCGTGTTCGGTA
GTGCTGTTCATCACTGTCATTTTACTGCCGGTTTTCTGTAGACGTTTGCAGCCATTTTTA
ATATGGAAAGCTAGATTTTTTTTTTGGTAATAAAATTTTGTATATTGATCAGAAAAAAAA
AAAAAAAAAAACCCCAGGGGGGGCCCCGGACCCAATTTTTGGT

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)