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Takifugu rubripes
cluster # 2286 cluster # 2286       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2286#0 length = 1115 sequences # 5  

consensusID : consensus_2286#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1115
fasta sequence
                              [TTTTCAACCATATTCATTTTAATCTTGCATTCCAAACTGAAGATTTACATTACAACATGTAAGGAGCTGAAACAAGACAGACCAATATGCCAACAGTCCACTGGATCTATAAGAAACACTCACAGCACCTTTTGTAGACTTAATTCACAAACATCCCAAAGTCAGCAAAAGGTTCAACAGACTGCATTTAACACAACTGCCTTCATTTTTACCTTTATTTTCTTTTAATTTAAACAGATTTACATGGCTATCTGGGTATTTTCATTGGGATTCTTTGTCATTCTGCATGGTTTACTGGTTGAACAATGTAGAAGCTGTTTTTTCACCCAAAAAGACGCAAGTTATTAAAGATGCATTAAATCCGAGCCTCGGCTGATCTATGAAGTGAAACCTGTTCCGTGATAGCAAAACCCTCTGAATATGATGTAAACACAAAAGATTGTGGGGGTATTCTCCCCC--TCCCCCACACAATCCAGTACTCAAATCAAAACTAGGTCAGACAATTGCAGTTTTAATAGAGTTGTGTTGAGTAATGATCATTTTGGCAATAAACTGTGGAGGGGTTACAGTGTCGGTGGCTTCAGTCCGTACTTCCTCGCCACTTCAGTCTGGGCGTAGGCTGCATCACACAACGAGTACAAGTGGGCCATCTCCATCTCAGACTTGGCTAGGTTAATGGCCTTGTTGAACATTTCTATAGCCTTGTCCAGATTGCCCCTTTGAACCTCGATGGTTCCCATCGTTTCATAGGCAAAGTCACATTTATTGTCGATCTCAATGGCCTTATTGATGAGGTCTAAACCGACGTCAAGGTCTTGTCTCCATTGAAGCTGTAACAAACCTTTGTGAACATATGTGGTGGCATTGTCTGGCTCCAGTTCAATACACCTATCATACATCTCGTCCGCCTTTCCAAACTGCTGCTGATCTGTCAAAGCCTGAGCATAAAGAGCGTAGCCTTCGGCACATTGAGGGAACCTTCTGATAACATCCTGAAAGCCATCAATGGCAATCTGAACTTGTGATTGGGTGTTTCCAGTATACGCCTGTCGGGACAGAGCAAAGCATTTCTGTGCTTGGGCTAGCGCAGAGTCGGGCCTCAGCCGAATGCATTC]

[+] EMBL CA329678             [TTTTCAACCATATTCATTTTAATCTTGCATTCTAAACTGAAGATTTACATTACAACATGTAAGGAGCTGAAACAAGACAGACCAATATGCCAACAGTCCACTGGATCTATAAAAAACACTCACAGCACCTTTTGTAGACTTAATTCACAAACATCCCAAAGTCAGCAAAAGGTTCAACAGACTGCATTTAACACAACTGCCTTCATTTTTACCTTTATTTTCTTTTAATTTAAACAGATTTACATGGCTATCTGGGTATTTTCATTGGGATTCTTTGTCATTCTGCATGGTTTACTGGTTGAACAATGTAAAAGCTGTTTTCTCACCCAAAAAGACGCAAGTTATTAAAGATGCATTAAATCCGAGCCTCGGCTGATCTATGAAGTGAAACCTGTTCCGTGATAGCAAAACCCTCTGAATATGATGTAAACACAAAAGATTGTGGGGGTATTCTCCCCC  TCCCCCACACAATCCAGTACTCAAATCAAAACTAGGTCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CA329530             [          TATTCATTTTAATCTTGCATTCCCCACTGAAGATTTACATTACAACATGTAAGGAGCTGAAACAAGACAGACCAATATGCCAACAGTCCACTGGATCTATAAGAAACACTCACAGCACCTTTTGTAGACTTAATTCACAAACATCCCAAAGTCAGCAAAAGGTTCAACAGACTGCATTTAACTCAACTGCCTTCATTTTTACCTTTATTTTCTTTTAATTTAAACATATTTACATGGCTATCTGTGTATTTTCATTGAGATTCTTTGTCATTCTGCATGGTTTACTGGTTGAACAATGTAGAAGCTGTTTTTTCACCCAAAAAGACGCAAGTTATTAAAGATGCATTAAATCCGAGCCTCGGCTGATCTATGAAGTGAAACCTGTTCCGTGATAGCAAAACCCTCTGAATATGATGTAAACACAAAAGATTGTGGGGGTATTCTCCCCC  TCCCCCACACAATCCAGTACTCAAATCAAAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CA590590             [                                                                                                                                                                                                                                                  CATGGCAATCTGGG GTTTTCATGGTGATTCTTGGTCATCGGCAATGGTTTACTGGTGGAACATGGTAGAAGCTGTTTTTTCACCCAAAAAGACGCAAGTAATTAAAGATGCATTAAATCCGAGCCTCGGCTGATCTATGAAGTGAAACCTGTTCCGTGATAGCAAAACCCTCTGAATATGATGTAAACACAAAAGATTGTGGGGGTATTCTCCCCCCTCCCCCCACACAATCCAGTACTCAAATCAAAACTAGGTCAGACAATTGCAGTTTTAATAGAGTTGTGTTGAGTAATGATCATTTTGGCAATAAACTGTGGAGGGGTTACAGTGTCGGTGGCTTCAGTCCGTACTTCCTCGCCACTTCAGTCTGGGCGTAGGCTGCATCACACAACGAGTACAAGTGGGCCATCTCCATCTCAGACTTGGCTAGGTTAATGGCCTTGTTGAACATTTCTATAGCCTTGTCCAGATTGCCCCTTTGAACCTCGATGGTTCCCATCGTTTCATAGGCAAAGTCACATTTATTGTCGATCTCAATGGCCTTATTGATGAGGTCTAAACCGACGTCAAGGTCTTGTCTCCATTGAAGCTGTAACAAACCTTTGTGAACATATGTGGTGGCATTGTCTGGCT                                                                                                                                                                                                                                                 ]
[+] EMBL CA329730             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAATTGCAGTTTTAATAGAGTTGTGTTGAGTAATGATCATTTTGGCAATAAACTGTGGAGGGGTTACAGTGTCGGTGGCTTCAGTCCGTACTTCCTCGCCACTTCAGTCTGGGCGTAGGCTGCATCACACAACGAGTACAAGTGGGCCATCTCCATCTCAGACTTGGCTAGGTTAATGGCCTTGTTGAACATCTCTATAGCCTTGTCCAGATTGCCCCTTTGAACCTCGATGGTTCCCATCGTTTCATAGGCAAAGTCACATTTATTGTCGATCTCAATGGCCTTATTGATGAGGTCTAAACCGACGTCAAGGTCTTGTCTCCATTGAAGCTGTAACAAACCTTTGTGAACATATGTGGTGGCATTGTCTGGCTCCAGTTCAATACACCTATCATACATCTCGTCCGCCTTTCCAAACTGCTGCTGATCTGTCAAAGCCTGAGCATAAAGAGCGTAGCCTTCGGCACATTGAGGGAACCTTCTGATAACATCCTGAAAGCCATCAATGGCAATCTGAACTTGTGATTGGGTGTTTCCAGTATACGCCTGTCGGTACAGAGCAAAGCATTTCTGTGCTTTGACTAACGCAGAGTCGGGCCTCAGCCGAATGCATTC]
[+] EMBL CA329576             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGCAGTTTTAATAGAGTTGTGCTGAGTAATGATCATTTTGGCAATAAACTGTGGAGGGGTTACAGTGTCGGTGGCTTCAGTCCGTACTTCCTCGCCACTTCAGTCTGGGCGTAGGCTGCATCACACAACGAGTACAAGTGGGCCATCTCCATCTCAGACTTGGCTAGGTTAATGGCCTTGTTGAACATTTCTATAGCCTTGTCCAGATTGCCCCTTTGAACCTCGATGGTTCCCATCGTTTCATAGGCAAAGTCACATTTATTGTCGATCTCAATGGCCTTATTGATGAGGTCTAAACCGACGTCAAGGTCTTGTCTCCATTGAAGCTGTAACAAACCTTTGTGAACATATGTGGTGGCATTGTCTGGCTCCAGTTCAATACACCTATCATACATCTCGTCCGCCTTTCCAAACTGCTGCTGATCTGTCAAAGCCTGAGCATAAAGAGCGTAGCCTTCGGCACATTGAGGGAACCTTCTGATAACATCCTGAAAGCCATCAATGGCAATCTGAACTTGTGATTGGTTGTTTCCAGTATATGCCTGTCGGGACAGAGCAAAGCATTTCTGTGCTTGAGCTAGCGCAGAGTCGGG                  ]


>consensus_2286#0 TTTTCAACCATATTCATTTTAATCTTGCATTCCAAACTGAAGATTTACATTACAACATGT AAGGAGCTGAAACAAGACAGACCAATATGCCAACAGTCCACTGGATCTATAAGAAACACT CACAGCACCTTTTGTAGACTTAATTCACAAACATCCCAAAGTCAGCAAAAGGTTCAACAG ACTGCATTTAACACAACTGCCTTCATTTTTACCTTTATTTTCTTTTAATTTAAACAGATT TACATGGCTATCTGGGTATTTTCATTGGGATTCTTTGTCATTCTGCATGGTTTACTGGTT GAACAATGTAGAAGCTGTTTTTTCACCCAAAAAGACGCAAGTTATTAAAGATGCATTAAA TCCGAGCCTCGGCTGATCTATGAAGTGAAACCTGTTCCGTGATAGCAAAACCCTCTGAAT ATGATGTAAACACAAAAGATTGTGGGGGTATTCTCCCCCTCCCCCACACAATCCAGTACT CAAATCAAAACTAGGTCAGACAATTGCAGTTTTAATAGAGTTGTGTTGAGTAATGATCAT TTTGGCAATAAACTGTGGAGGGGTTACAGTGTCGGTGGCTTCAGTCCGTACTTCCTCGCC ACTTCAGTCTGGGCGTAGGCTGCATCACACAACGAGTACAAGTGGGCCATCTCCATCTCA GACTTGGCTAGGTTAATGGCCTTGTTGAACATTTCTATAGCCTTGTCCAGATTGCCCCTT TGAACCTCGATGGTTCCCATCGTTTCATAGGCAAAGTCACATTTATTGTCGATCTCAATG GCCTTATTGATGAGGTCTAAACCGACGTCAAGGTCTTGTCTCCATTGAAGCTGTAACAAA CCTTTGTGAACATATGTGGTGGCATTGTCTGGCTCCAGTTCAATACACCTATCATACATC TCGTCCGCCTTTCCAAACTGCTGCTGATCTGTCAAAGCCTGAGCATAAAGAGCGTAGCCT TCGGCACATTGAGGGAACCTTCTGATAACATCCTGAAAGCCATCAATGGCAATCTGAACT TGTGATTGGGTGTTTCCAGTATACGCCTGTCGGGACAGAGCAAAGCATTTCTGTGCTTGG GCTAGCGCAGAGTCGGGCCTCAGCCGAATGCATTC



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)