Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2294 cluster # 2294       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2294#0 length = 1449 sequences # 5  

consensusID : consensus_2294#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1449
fasta sequence
                              [AGCACAAATTAATGTCTCAGGCACTGATGCAAGTATTGATGCCCCTGACATTGATATCAAAGGGAAAAGGGGCAAATTTAAACTTCCTAAAGTTAAAGGAAAGACAAAGAAACCTGATTTTGAGGTAGACACTCCAGCAATAAATCTCGAAGTTGACTCACCCAATATCCATGTCAAAGGAACGAAGGTGAAGAAGCCTCTTTTTGGTAAGCTACATTTTCCTGATGTGGAGATAGATATTAAATCACCAAAACTTAAAGGTGATGGATCTTTATCATCTGATGTAGATTTGCCATCTGCTTCATTGAACATCTCCCCAGACAAAGGCAAAGATGTGAACATGCCAAAAGTGACCATGTCTGCTCCGGATGTTGATGCAAACCTCAGCACACACACAGAGGGTTCAATATCTGCTAGTCATAAAGGGCCATGGTTAAATGTGAAGGGCGGAGCAGAGTTTGATGGTGGTGTCTCAGCAGCCGCAGTGCCTTGTGGCCTTAACTTCCCAGAGGGTGCTGTAACCTTTCCCAAATTGAAGATTCCAAAATTTGGTTTTCTTTACACGGAAGAGCTGGACGGTGAAGGGGGACATTTAGATAGTGCAGCTTTAAAAATACAATCTCCATCAATTAGTTGTCAAGCAAGTTCTCCAAATATTCAAGCTACAAGTCCTGAAGTGAGGTATAATGAAAGCAAGGTCAAGGTGAAAATGCCAAGATTATTTGGCAAGTCAAAACAAAAGGTTGGCAGCGCAGGTGATCTTCAGGGTCCAGAGATAGAATTGGGTGCAAGAGGAAAGGATGTGCATGCAGAGAAAGAATTAGGTGGGAAATTTGAATTACAGGGCAACCCTGGCCTCAGTGTGTCTTCAAAGAGCAAATCGGCCTCCCTGGATGTGTTCAAAATAAGGCACAGATCTTCTCTGAGCGATGAGGGGGGCCTTAATATTAGTTCTTCACCTCACTTGGAAGCTGGAAGTGGTGATATTTCATTAGACCTTGGAGGGGGCAAAATTAAGGGGAAGAAAGGCAAGTTGAAATTTGGCACCTTTGGAGGGTTTGGTTCAAAGTCGAAGGGCTCGTATGAAGTGACACTTGGTGAAGGTGCCGACACAGGGGCAGAGGGAAGTGCAGGTGTTTCACAAACTTTTAAGAAATCTAGGTTGTCTTCATCCTCCAGCAGTGACAGTGGTGGTGGTTTAAAGTTGCCAAAAGTTGAACTGAAAGTTTCGCCCAAAAAATAATCAACGCCAATTAAAACTGTGCTCTTGGCACAAAATACCAGTTCTTCAATTGAAAGGGGTCTCACATAGTCCTCTAAATTGTTAAACATTTTTTCTCAAGTAAACCAAGCCTGCAACACAATAAACCATTCAAAGTGTAAATAAGATGAATGTGTATTGTTATATTATTTCTGTACATAGTCCAGATTTATTGAATATATTCCACT]

[+] EMBL BU806946             [AGCACAAATTAATGTCTCAGGCACTGATGCAAGTATTGATGCCCCTGACATTGATATCAAAGGGAAAAGGGGCAAATTTAAACTTCCTAAAGTTAAAGGAAAGACAAAGAAACCTGATTTTGAGGTAGACACTCCAGCAATAAATCTCGAAGTTGACTCACCCAATATCCATGTCAAAGGAACGAAGGTGAAGAAGCCTCTTTTTGGTAAGCTACATTTTCCTGATGTGGAGATAGATATTAAATCACCAAAACTTAAAGGTGATGGATCTTTATCATCTGATGTAGATTTGCCATCTGCTTCATTGAACATCTCCCCAGACAAAGGCAAAGATGTGAACATGCCAAAAGTGACCATGTCTGCTCCGGATGTTGATGCAAACCTCAGCACACACACAGAGGGTTCAATATCTGCTAGTCATAAAGGGCCATGGTTAAATGTGAAGGGCGGAGCAGAGTTTGATGGTGGTGTCTCAGCAGCCGCAGTGCCTTGTGGCCTTAACTTCCCAGAGGGTGCTGTAACCTTTCCCAAATTGAAGATTCCAAAATTTGGTTTTCTTTACACGGAAGAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BU807921             [                                                              GGAAAAGGGGCAAATTTAAACTTCCTAAAGTTAAAGGAAAGACAAAGAAACCTGATTTTGAGGTAGACACTCCAGCAATAAATCTCGAAGTTGACTCACCCAATATCCATGTCAAAGGAACGAAGGTGAAGAAGCCTCTTTTTGGTAAGCTACATTTTCCTGATGTGGAGATAGATATTAAATCACCAAAACTTAAAGGTGATGGATCTTTATCATCTGATGTAGATTTGCCATCTGCTTCATTGAACATCTCCCCAGACAAAGGCAAAGATGTGAACATGCCAAAAGTGACCATGTCTGCTCCGGATGTTGATGCAAACCTCAGCACACACACAGAGGGTTCAATATCTGCTAGTCATAAAGGGCCATGGTTAAATGTGAAGGGCGGAGCAGAGTTTGATGGTGGTGTCTCAGCAGCCGCAGTGCCTTGTGGCCTTAACTTCCCAGAGGGTGCTGTAACCTTTCCCAAATTGAAGATTCCAAAATTTGGTTTTCTTTACACGGAAGAGCTGGACGGTGAAAGGGGACATTTAGATAGTGCAGCTTTAAAAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BU806164             [                                                                                                                                                                                                                                                                                                                                                                                                                      ATATCTGCTAGTCATAAAGGGCCATGGTTAAATGTGAAGGGCGGAGCAGAGTTTGATGGTGGTGTCTCAGCAGCCGCAGTGCCTTGTGGCCTTAACTTCCCAGAGGGTGCTGTAACCTTTCCCAAATTGAAGATTCCAAAATTTGGTTTTCTTTACACGGAAGAGCTGGACGGTGAAGGGGGACATTTAGATAGTGCAGCTTTAAAAATACAATCTCCATCAATTAGTTGTCAAGCAAGTTCTCCAAATATTCAAGTTCCCAGTCCTGAAGTGAGGTATAATGAAAGCAAGGTCAAGGTGAAAATGCCAAGATTATTTGGCAAGTCAAAACAAAAGGTTGGCAGCGCAGGTGATCTTCAGGGTCCAGAGATAGAATTGGGTGCAAGAGGAAAGGATGTGCATGCAGAGAAAGAATTAGGTGGGAAATTTGAATTACAGGGCAACCCTGGCCTCAGTGTGTCTTCAAAGAGCAAATCGGCCTCCCTGGATGTGTTCAAAATAAGGCACAGATCTTCTCTGAGCGATGAGGGGGGCCTTAATATTAGTTCTTCACCTCACTTGGAAGCTGGAAGTGGTGATATTTCATTAGACCTTGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA588467             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCAATATTC  CCTACAAGTCCTGAAGTGAGGTATAATGAAAGCAAGGTCAAGGTGAAAATGCCAAGATTATTTGGCAAGTCAAAACAAAAGGTTGGCAGCGCAGGTGATCTTCAGGGTCCAGAGATAGAATTGGGTGCAAGAGGAAAGGATGTGCATGCAGAGAAAGAATTAGGTGGGAAATTTGAATTACAGGGCAACCCTGGCCTCAGTGTGTCTTCAAAGAGCAAATCGGCCTCCCTGGATGTGTTCAAAATAAGGCACAGATCTTCTCTGAGCGATGAGGGGGGCCTTAATATTAGTTCTTCACCTCACTTGTAAGCTGGAAGTGGTGATATTTCATTAGACCTTGGAGGGGGCAAAATTAAGGGGAAGAAAGGCAAGTTGAAATTTGGCACCTTTGGAGGGTTTGGTTCAAAGTCGAAGGGCTCGTATGAAGTGACACTTGGTGAAGGTGCCGACACAGGGGCAGAGGGAAGTGCAGGTGTTTCAC AACTTTTAAGAAATCTAGGTTGTCTTCATCCTC                                                                                                                                                                                                                                                                                 ]
[-] EMBL CA332203             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGCCTCAGTGTGTCTTCAAAGAGCAAATCGGCCTCCCTGGATGTGTTCAAAATAAGGCACAGATCTTCTCTGAGCGATGAGGGGGGCCTTAATATTAGTTCTTCACCTCACTTGGAAGCTGGAAGTGGTGATATTTCATTAGACCTTGGAGGGGGCAAAATTAAGGGGAAGAAAGGCAAGTTGAAATTTGGCACCTTTGGAGGGTTTGGTTCAAAGTCGAAGGGCTCGTATGAAGTGACACTTGGTGAAGGTGCCGACACAGGGGCAGAGGGAAGTGTAGGTGTTTCACAAACTTTTAAGAAATCTAGGTTGTCTTCATCCTCCAGCAGTGACAGTGGTGGTGGTTTAAAGTTGCCAAAAGTTGAACTGAAAGTTTCGCCCAAAAAATAATCAACGCCAATTAAAACTGTGCTCTTGGCACAAAATACCAGTTCTTCAATTGAAAGGGGTCTCACATAGTCCTCTAAATTGTTAAACATTTTTTCTCAAGTAAACCAAGCCTGCAACACAATAAACCATTCAAAGTGTAAATAAGATGAATGTGTATTGTTATATTATTTCTGTACATAGTCCAGATTTATTGAATATATTCCACT]


>consensus_2294#0 AGCACAAATTAATGTCTCAGGCACTGATGCAAGTATTGATGCCCCTGACATTGATATCAA AGGGAAAAGGGGCAAATTTAAACTTCCTAAAGTTAAAGGAAAGACAAAGAAACCTGATTT TGAGGTAGACACTCCAGCAATAAATCTCGAAGTTGACTCACCCAATATCCATGTCAAAGG AACGAAGGTGAAGAAGCCTCTTTTTGGTAAGCTACATTTTCCTGATGTGGAGATAGATAT TAAATCACCAAAACTTAAAGGTGATGGATCTTTATCATCTGATGTAGATTTGCCATCTGC TTCATTGAACATCTCCCCAGACAAAGGCAAAGATGTGAACATGCCAAAAGTGACCATGTC TGCTCCGGATGTTGATGCAAACCTCAGCACACACACAGAGGGTTCAATATCTGCTAGTCA TAAAGGGCCATGGTTAAATGTGAAGGGCGGAGCAGAGTTTGATGGTGGTGTCTCAGCAGC CGCAGTGCCTTGTGGCCTTAACTTCCCAGAGGGTGCTGTAACCTTTCCCAAATTGAAGAT TCCAAAATTTGGTTTTCTTTACACGGAAGAGCTGGACGGTGAAGGGGGACATTTAGATAG TGCAGCTTTAAAAATACAATCTCCATCAATTAGTTGTCAAGCAAGTTCTCCAAATATTCA AGCTACAAGTCCTGAAGTGAGGTATAATGAAAGCAAGGTCAAGGTGAAAATGCCAAGATT ATTTGGCAAGTCAAAACAAAAGGTTGGCAGCGCAGGTGATCTTCAGGGTCCAGAGATAGA ATTGGGTGCAAGAGGAAAGGATGTGCATGCAGAGAAAGAATTAGGTGGGAAATTTGAATT ACAGGGCAACCCTGGCCTCAGTGTGTCTTCAAAGAGCAAATCGGCCTCCCTGGATGTGTT CAAAATAAGGCACAGATCTTCTCTGAGCGATGAGGGGGGCCTTAATATTAGTTCTTCACC TCACTTGGAAGCTGGAAGTGGTGATATTTCATTAGACCTTGGAGGGGGCAAAATTAAGGG GAAGAAAGGCAAGTTGAAATTTGGCACCTTTGGAGGGTTTGGTTCAAAGTCGAAGGGCTC GTATGAAGTGACACTTGGTGAAGGTGCCGACACAGGGGCAGAGGGAAGTGCAGGTGTTTC ACAAACTTTTAAGAAATCTAGGTTGTCTTCATCCTCCAGCAGTGACAGTGGTGGTGGTTT AAAGTTGCCAAAAGTTGAACTGAAAGTTTCGCCCAAAAAATAATCAACGCCAATTAAAAC TGTGCTCTTGGCACAAAATACCAGTTCTTCAATTGAAAGGGGTCTCACATAGTCCTCTAA ATTGTTAAACATTTTTTCTCAAGTAAACCAAGCCTGCAACACAATAAACCATTCAAAGTG TAAATAAGATGAATGTGTATTGTTATATTATTTCTGTACATAGTCCAGATTTATTGAATA TATTCCACT



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)