Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2325 cluster # 2325       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2325#0 length = 797 sequences # 5  
consensusID : consensus_2325#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 797
fasta sequence 
                              [CTCAGCGACACCCAATGGGGCTAGATAAGTGCGATGCTTTGTATCAGGACGTGTTTACGGTTACAAACGTCGCCTTTATCTAGCACAGGATGCACTTTGGCTCTGGGATCAAGGAGCCAGCACATCATTGCTATATAACTGGACAGAGCCCTCATGTAGCTTCCATCGCTGTCATTTCTTGAGAGGAACACACACAGGCGACGCCATGAGCAAGCTGCTGGCCATCACTGCGCTCCTCGTCCTCCTCGTGGTGGGTGCTGAGAGCTTCCGTGTGCCCAGGGAGACGGATGAGGAGCAGGGGACCCTGAGCAGGATCACCGATAGCTTTAGGTCCTACTACAGCAGAGCTGTCAACACTGCCAGTGCATATCTGGAGGGAATAAAGGGGCTGAAGTTTGAGGAGAAGGCAAAGAACCTTTACAGTGACACTAAAACGGTGGTGAGAACCTACGCTGAAATTGTGCAAGATCAGCTCTACCACGCCTTGTATGCGCAGCAGTAACGCGCCCCCCAGTCTCCTCCAGCCACGCTCACAGTTGGAGCCGTCACACAGTCGCCATGGACGGAGATCCGCTCCAGAAGTCTTGGAGAGATCCTTGAAAGATGTGACGTCCATCCTGCCCCTCAGAGAAGAACAACTGAAACAAGCCTGGAACCAGAGAGGAGCGTCGCTGCTGCAGCCTCGGGGACGTGAAGATGGGGAAACGTGTCCTCACGGCAGGCTCGAAAATAATAGAGAATGGGAGAAAAATGGCCACCTAAAAGTGACTTAAACTGTTTGTCATGTCTTGGGATAG]

[+] EMBL FR0056879            [CTCAGCGACACCCAATGGGGCTAGATAAGTGCGATGCTTTGTATCAGGACGTGTTTACGGTTACAAACGTCGCCTTTATCTAGCACAGGATGCACTTTGGCTCTGGGATCAAGGAGCCAGCACATCATTGCTATATAACTGGACAGAGCCCTCATGTAGCTTCCATCGCTGTCATTTCTTGAGAGGAACACACACAGGCGACGCCATGAGCAAGCTGCTGGCCATCACTGCGCTCCTCGTCCTCCTCGTGGTGGGTGCTGAGAGCTTCCGTGTGCCCAGGGAGACGGATGAGGAGCAGGGGACCCTGAGCAAGATCACCGATAGCTTTAGGTCCTACTACAGCAGAGCTGTCAACACTGCCAGTGCATATCTGGAGGGAATAGAGGGGCTGAAGTTTGAGGAGAAGGCAAAGAACCTTTACAGTGACACTAAAACGGTGGTGAGAACCTACCCTGAAATTGTGCAAGATCAGCTCTACCAC                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA845075             [                                                                                                                                                                                           ACACACACAGGCGACGCCATGAGCAAGCTGCTGGCCATCACTGCGCTCCTCGTCCTCCTCGTGGTGGGTGCTGAGAGCTTCCGTGTGCCCAGGGAGACGGATGAGGAGCAGGGGACCCTGAGCAGGATCACCGATAGCTTTAGGTCCTACTACAGCAGAGCTGTCAACACTGCCAGTGCATATCTGGAGGGAATAAAGGGGCTGAAGTTTGAGGAGAAGGCAAAGAACCTTTACAGTGACACTAAAACGGTGGTGAGAACCTACGCTGAAATTGTGCAAGATCAGCTCTACCACGCCTTGTATGCGCAGCAGTAACGCGCCCCCCAGTCTCCTCCAGCCACGCTCACAGTTGGAGCCGTCACACAGTCGCCATGGACGGAGATCCGCTCCAGAAGTCTTGGAGAGATCCTTGAAAGATGTGACGTCCATCCTGCCCCTCAGAGAAGAACAACTGAAACAAGCCTGGAACCAGAGAG                                                                                                                                      ]
[+] EMBL CA845115             [                                                                                                                                                                                                                                 CACTGCGCTCCTCGTCCTCCTCGTGGTGGGTGCTGAGAGCTTCCGTGTGCCCAGGGAGACGGATGAGGAGCAGGGGACCCTGAGCAGGATCACCGATAGCTTTAGGTCCTACTACAGCAGAGCTGTCAACACTGCCAGTGCATATCTGGAGGGAATAAAGGGGCTGAAGTTTGAGGAGAAGGCAAAGAACCTTTACAGTGACACTAAAACGGTGGTGAGAACCTACGCTGAAATTGTGCAAGATCAGCTCTACCACGCCTTGTATGCGCAGCAGTAACGCGCCCCCCAGTCTCCTCCAGCCACGCTCACAGTTGGAGCCGTCACACAGTCGCCATGGACGGAGATCCGCTCCAGAAGTCTTGGAGAGATCCTTGAAAGATGTGACGTCCATCC  CCCCTCAGAGAAGAACAACTGAAACAAGCCTGGAACCAGAGAGGAGCGTCGCTGCTGCAGCCTCGGGGACGTGAAGATGGGGAAACGTGTCCTCACGGCAGGCTCGAAAATAATAAAGAATGGGAGAAAAATGGCCACCTAAAAGTGACTTAAACTGTTTGTCATGTCT        ]
[+] EMBL FR0056894            [                                                                                                                                                                                                                                                  TCCTCGTGGTGGGTGCTGAGAGCTTCCGTGTGCCCAGGGAGACGGATGAGGAGCAGGGGACCCTGAGCAGGATCACCGATAGCTTTAGGTCCTACTACAGCAGAGCTGTCAACACTGCCAGTGCATATCTGGAGGGAATAAAGGGGCTGAAGTTTGAGGAGAAGGCAAAGAACCTTTACAGTGACACTAAAACGGTGGTGAGAACCTACGCTGAAATTGTGCAAGATCAGCTCTACCACGCCTTGTATGCGCAGCAGTAACGCGCCCCCCAGTCTCCTCCAGCCACGCTCACAGTTGGAGCCGTCACACAGTCGCCATGGACGGAGATCCGCTCCAGAAGTCTTGGAGAGATCCTTGGAAGATGTGACGTCCATCCTGCCCCTCAGAGAAGAACAGCTGAAACAAGCCTGGGACC                                                                                                                                            ]
[+] EMBL FR0056632            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTGAAATTGTGCAAGATCAGCTCTACCACGCCTTGTATGCGCAGCAGTAACGCGCCCCCCAGTCTCCTCCAGCCACGCTCACAGTTGGAGCCGTCACACAGTCGCCATGGACGGAGATCCGCTCCAGAAGTCTTGGNGAGATCCTTGAAAGATGTGACGTCCATCCTGCCCCTCAGAGAAGAACAACTGAGACAAGCCTGGAACCAGAGAGGAGCGTCGCTGCTGCAGCCTCGGGGACGTGAAGATGGGGAAACGTGTCCTCACGGCAGGCTCGAAAATAATAGAGAATGGGAGAAAAATGGCCACCTAAAAGTGACTTAAACTGTTTGTCATGTCTTGGGATAG]




>consensus_2325#0
CTCAGCGACACCCAATGGGGCTAGATAAGTGCGATGCTTTGTATCAGGACGTGTTTACGG
TTACAAACGTCGCCTTTATCTAGCACAGGATGCACTTTGGCTCTGGGATCAAGGAGCCAG
CACATCATTGCTATATAACTGGACAGAGCCCTCATGTAGCTTCCATCGCTGTCATTTCTT
GAGAGGAACACACACAGGCGACGCCATGAGCAAGCTGCTGGCCATCACTGCGCTCCTCGT
CCTCCTCGTGGTGGGTGCTGAGAGCTTCCGTGTGCCCAGGGAGACGGATGAGGAGCAGGG
GACCCTGAGCAGGATCACCGATAGCTTTAGGTCCTACTACAGCAGAGCTGTCAACACTGC
CAGTGCATATCTGGAGGGAATAAAGGGGCTGAAGTTTGAGGAGAAGGCAAAGAACCTTTA
CAGTGACACTAAAACGGTGGTGAGAACCTACGCTGAAATTGTGCAAGATCAGCTCTACCA
CGCCTTGTATGCGCAGCAGTAACGCGCCCCCCAGTCTCCTCCAGCCACGCTCACAGTTGG
AGCCGTCACACAGTCGCCATGGACGGAGATCCGCTCCAGAAGTCTTGGAGAGATCCTTGA
AAGATGTGACGTCCATCCTGCCCCTCAGAGAAGAACAACTGAAACAAGCCTGGAACCAGA
GAGGAGCGTCGCTGCTGCAGCCTCGGGGACGTGAAGATGGGGAAACGTGTCCTCACGGCA
GGCTCGAAAATAATAGAGAATGGGAGAAAAATGGCCACCTAAAAGTGACTTAAACTGTTT
GTCATGTCTTGGGATAG

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)