Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2410 cluster # 2410       Sequences # 6       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2410#0 length = 782 sequences # 6  
consensusID : consensus_2410#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 782
fasta sequence 
                              [TTTCAGTGTACTTTCAGGGCAGCATCCACTCAAGTAGTCTCCTTTTTGTTTCACACAGTCGTGCATAGGTTTTATTTTCTCTTCTGTCAGTCTTTCCTTTAGACTTTTCCTTTTTTAGAAAGACCACTTGAGGAGATCAGAAAGAGACCGGACGTTGTGGAAGGAGGAGTTTTTACAACCCCCCCTTTACTGCCTCGATTTTTCTTGCTAGCTGTTTGTAAAGAGAGTTCTTTTCTGCGGTTCCAGGAAACATGAGCTTTCTTTTTGCAAACCGTGGCAACAAAACCTTCAAGCCGAAGAAGAATATCCCGGAGGGATCTCACCAGTACGAGCTGTTGAAACATGCC-GAGGCTACTCTGGGGAGTGGTAACCTGCGCATGGCAGTCATGTTGCCCGATGGCGAAGACTTAAACGAATGGGTCGCAGTAAACACTGTGGATTTCTTCAACCAGATCAACATGCTTTATGGCACCATCGCAGATTTTTGCACAGAGGAAAGCTGTCCAGTCATGTCTGCTGGTCCGAAGTATGAGTACCATTGGGCTGATGGGACCAACATCAAGAAGCCAATCAAATGTTCAGCTCCCAAGTATATTGATTACCTAATGACCTGGGTCCAAGACCAGCTCGATGATGAGACACTTTTTCCTTCGAAGATCGGTGTTCCCTTCAAGCGAAACTTTATGTCAGTGGCAAAGACCATCCTCAAGCGCCTGTTCCGAGTCTACGCTCACATCTACCACCAGCACTTTGACTCAGTGATTCAGCTGCAGGAGGAGGCC]

[+] EMBL CA591507             [TTTCAGTGTACTTTCAGGGCAGCATCCACTCAAGTAGTCTCCTTTTTGTTTCACACAGTCGTGCATAGGTTTTATTTTCTCTTCTGTCAGTCTTTCCTTTAGACTTTTCCTTTTTTAGAAAGACCACTTGAGGAGATCAGAAAGAGACCGGACGTTGTGGAAGGAGGAGTTTTTACAACCCCCCCTTTACTGCCTCGATTTTTCTTGCTAGCTGTTTGTAAAGAGAGTTCTTTTCTGCGGTTCCAGGAAACATGAGCTTTCTTTTTGCAAACCGTGGCAACAAAACCTTCAAGCCGAAGAAGAATATCCCGGAGGGATCTCACCAGTACGAGCTGTTGAAACATGCC GAGGCTACTCTGGGGAGTGGTAACCTGCGCATGGCAGTCATGTTGCCCGATGGCGAAGACTTAAACGAATGGGTCGCAGTAAACACTGTGGATTTCTTCAACCAGATCAACATGCTTTATGGCACCATCGCAGATTTTTGCACAGAGGAAAGCTGTCCAGTCATGTCTGCTGGTCCGAAGTATGAGTACCATTGGGCTGATGGGACCAACATCAAGAAGCCAATCAAATGTTCAGCTCCCAAGTATATTGATTACCTAATGACCTGGGTCCAAGACCAGCTCGATGATGAGACACTTTTTCCTTCGAAGATCGGTGTTCCCTTCAAGCGAAACTTTATGTCAGTGGCAAAGACCATCCTCAAGCGCCTGTTCCGAGTCTACGCTCACATCTACCACCAGCACTTTGACTCAGTGATTCAGCTGCAGGAGGAGGCC]
[+] EMBL BU807996             [                      CATCCACTCAAGTAGTCTCCTTTTTGTTTCACACAGTCGTGCATAGGTTTTATTTTCTCTTCTGTCAGTCTTTCCTTTAGACTTTTCCTTTTTTAGAAAGACCACTTGAGGAGATCAGAAAGAGACCGGACGTTGTGGAAGGAGGAGTTTTTACAACCCCCCCTTTACTGCCTCGATTTTTCTTGCTAGCTGTTTGTAAAGAGAGTTCTTTTCTGCGGTTCCAGGAAACATGAGCTTTCTTTTTGCAAACCGTGGCAACAAAACCTTCAAGCCGAAGAAGAATATCCCGGAGGGATCTCACCAGTACGAGCTGTTGAAACATGCC GAGGTTACTCTGGGGAGTGGTAACCTGCGCATGGCAGTCATGTTGGCCGATGGCGAAGACTTAAACGAATGGGTCGCAGTAAACACTGTGGATTTCTTCAACCAGATCAACATGCTTTATGGCACCATCGCAGATTTTTGCACAGAGGAAAGCTGGCCAGTCATGTCTGCTGGTCCGAAGTATGAGTACCATTGGGCTGATGGGACCAACATCAAGAAGCCAATCAAATGTTCAGCTCCCAAGTATATTGATTACCTAATGACCTGGGTCCAAGACCAGCTCGATGATGAGACACTTTTT                                                                                                                                       ]
[+] EMBL BU808049             [                                        CCTTTTTGTTTCACACAGTCGTGCATAGGTTTTATTTTCTCTTCTGTCAGTCTTTCCTTTAGACTTTTCCTTTTTTAGAAAGACCACTTGAGGAGATCAGAAAGAGACCGGACGTTGTGGAAGGAGGAGTTTTTACAACCCCCCCTTTACTGCCTCGATTTTTCTTGCTAGCTGTTTGTAAAGAGAGTTCTTTTCTGCGGTTCCAGGAAACATGAGCTTTCTTTTTGCAAACCGTGGCAACAAAACCTTCAAGCCGAAGAAGAATATCCCGGAGGGATCTCACCAGTACGAGCTGTTGAAACATGCC GAGGCTACTCTGGGGAGTGGTAACCTGCGCATGGCAGTCATGTTGCCCGATGGCGAAGACTTAAACGAATGGGTCGCAGTAAACACTGTGGATTTCTTCAACCAGATCAACATGCTTTATGGCACCATCGCAGATTTTTGCACAGAGGAAAGCTGTCCAGTCATGTCTGCTGGTCCGAAGTATGAGTACCATTGGGCTGATGGGACCAACATCAAGAAGCCAATCAAATGTTCAGCTCCCAAGTATATTGATTACCTAATGACCTGGGTCCAAGACCAGCTCGATGATGAGACACTTTTTCCT                                                                                                                                    ]
[+] EMBL FR0062836            [                                                               CATAGGTTTTATTTTCTCTTCTGTCAGTCTTTCCTTTAGACTTTTCCTTTTTTAGAAAGACCACTTGAGGAGATCAGAAAGAGACCGGACGTTGTGGAAGGAGGAGTTTTTACAACCCCCCCTTTACTGCCTCGATTTTTCTTGCTAGCTGTTTGTAAAGAGAGTTCTTTTCTGCTGGTCCAGGAAACATGAGCTTTCTTTTTGCAAACCGTGGCAACAAAACCTTCAAGCCGAAGAAGAATATCCCGGA GGATCTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL FR0061769            [                                                                  AGGGTTTATTTTCTCTTCGGTCAGTCTTTCCTTTAGACTTTTCCTTTTCTAGAAAGACCACTTGAGGAGATCAGAAAGAGACCGGACGTTGTGGAAGGAGGAGGTTTTACAACCCCCCCTTTACTGCCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL FR0058818            [                                                                                                                                        TCAGAAAGAGACCGTACGTTGTGGAATGAGGAGTTTTTACAACCCCCCCTTTACTGCCTCGATTTTTCTTGCTAGCTGGTTGTAAAGAGAGTTCTTTTCTGCGGGTCCAGGAAACATGAGCTTTCTTTTTGCAAACCGTGGCAACAAAACCTTCAAGCCGAAGAAGAATATCCCGGAGGGTTCTCACCAGGACGAGCTGTTGAAACATGCCGGAGGCTACTTTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                     ]




>consensus_2410#0
TTTCAGTGTACTTTCAGGGCAGCATCCACTCAAGTAGTCTCCTTTTTGTTTCACACAGTC
GTGCATAGGTTTTATTTTCTCTTCTGTCAGTCTTTCCTTTAGACTTTTCCTTTTTTAGAA
AGACCACTTGAGGAGATCAGAAAGAGACCGGACGTTGTGGAAGGAGGAGTTTTTACAACC
CCCCCTTTACTGCCTCGATTTTTCTTGCTAGCTGTTTGTAAAGAGAGTTCTTTTCTGCGG
TTCCAGGAAACATGAGCTTTCTTTTTGCAAACCGTGGCAACAAAACCTTCAAGCCGAAGA
AGAATATCCCGGAGGGATCTCACCAGTACGAGCTGTTGAAACATGCCGAGGCTACTCTGG
GGAGTGGTAACCTGCGCATGGCAGTCATGTTGCCCGATGGCGAAGACTTAAACGAATGGG
TCGCAGTAAACACTGTGGATTTCTTCAACCAGATCAACATGCTTTATGGCACCATCGCAG
ATTTTTGCACAGAGGAAAGCTGTCCAGTCATGTCTGCTGGTCCGAAGTATGAGTACCATT
GGGCTGATGGGACCAACATCAAGAAGCCAATCAAATGTTCAGCTCCCAAGTATATTGATT
ACCTAATGACCTGGGTCCAAGACCAGCTCGATGATGAGACACTTTTTCCTTCGAAGATCG
GTGTTCCCTTCAAGCGAAACTTTATGTCAGTGGCAAAGACCATCCTCAAGCGCCTGTTCC
GAGTCTACGCTCACATCTACCACCAGCACTTTGACTCAGTGATTCAGCTGCAGGAGGAGG
CC

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)