Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2443 cluster # 2443       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2443#0 length = 656 sequences # 6  

consensusID : consensus_2443#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 656
fasta sequence
                              [TCCTGGACCTTCTGTCCAATTTATGTTCATTGGTTCCGTTATTGTTGGGGAAAAGGTCAAACCTTGAAGTTGCTGCAATCCTGAAGGAAACTGCACGTCTCGGCTGAATTAACTATAGGCGCGGTCATCAGAAGATGGAAACGTCAACGGGCACATCCCAGGGATCAAACCCTCCGTACGAGGACAAAGATGCCACCCTCAGTCCTGAAGATCTGTCCGAGATGCTGGCAGCAGGGACCAAGGAAGTTCATGAAAAGGCCGAGAACACCCAGTTCGTGAAAGATTTCCTCAGGGGGCGCATTAAGAGAGAGCTTTTCAAGCTTGGATCTGTGGCGCTTTATCACACCTACACAGCAATGGAAGAGGAAATTGAGAGGAACAAAGACCATCCCCATTTTGCCCCCTTATATTTTCCTGCAGAGCTGCACCGCCACCAGGCTCTGGCCTGTGACCTTGAGTACTTTTATGGCCCTAACTGGCAGAGCCAGGTGACGTGCTCGCAGGCCACCCAACGTTACGTGGACCGCATTCATCAAGTAGGCCGAGAGGATCCAGTTCTGCTGGTGGCCCACGCCTACACCCGCTACATGGGGGACCTTTCTGGGGGTCAGGTGCTGAGGAAGGTGGCACAGAGAGCCCTGAAGCTGCCACCTACT]

[+] EMBL CA332739             [TCCTGGACCTTCTGTCCAATTTATGTTCATTGGTTCCGTTATTGTTGGGGAAAAGGTCAAACCTTGAAGTTGCTGCAATCCTGAAGGAAACTGCACGTCTCGGCTGAATTAACTATAGGCGCGGTCATCAGAAGATGGAAACGTCAACGGGCACATCCCAGGGATCAAACCCTCCGTACGAGGACAAAGATGCCACCCTCAGTCCTGAAGATCTGTCCGATATTTTGTCAGCAGGGACCAAGGAAGTTCATGAAAAGGCCGAGAACACCCAGTTCGTGAAAGATTTCCTCAGGGGGCGCATTAAGAGAGAGCTTTTCAAGCTTGGATCTGTGGCGCTTTATCACACCTACACAGCAATGGAAGAGGAAATTGAAAGGAACAAAGACCATCCCCATTTTGCCCCCTTATATTTTCCTGCAGAGCTGCACCGCCACCAGGCTCTGGCCTGTGACCTTGAGTACTTTTATGGCCCTAACTGGCAAAGCCAGGTGACGTGCTCGCAGGCCCACCCACGTTACGTGGACCGC                                                                                                                                 ]
[+] EMBL CA591119             [         TTCTGTCCAATTTATGTTCATTGGTTCCGTTATTGTTGGGGAAAAGGTCAAACCTTGAAGTTGCTGCAATCCTGAAGGAAACTGCACGTCTCGGCTGAATTAACTATAGGCGCGGTCATCAGAAGATGGAAACGTCAACGGGCACATCCCAGGGATCAAACCCTCCGTACGAGGACAAAGATGCCACCCTCAGTCCTGAAGATCTGTCCGAGATGCTGGCAGCAGGGACCAAGGAAGTTCATGAAAAGGCCGAGAACACCCAGTTCGTGAAAGATTTCCTCAGGGGGCGCATTAAGAGAGAGCTTTTCAAGCTTGGATCTGTGGCGCTTTATCACACCTACACAGCAATGGAAGAGGAAATTGAGAGGAACAAAGACCATCCCCATTTTGCCCCCTTATATTTTCCTGCAGAGCTGCACCGCCACCAGGCTCTGGCCTGTGACCTTGAGTACTTTTATGGCCCTAACTGGCAGAGCCAGGTGACGTGCTCGCAGGCCACCCAACGTTACGTGGACCGCATTCATCAAGTAGGCCGAGAGGATCCAGTTCTGCTGGTGGCCCACGCCTACACCCGCTACATGGGGGACCTTTCTGGGGGTCAGGTGCTG                                       ]
[+] EMBL CA333086             [             GTCCAATTTATGTTCATTGGTTCCGTTATTGTTGGGGAAAAGGTCAAACCTTGAAGTTGCTGCAATCCTGAAGGAAACTGCACGTCTCGGCTGAATTAACTATAGGCGCGGTCATCAGAAGATGGAAACGTCAACGGGCACATCCCAGGGATCAAACCCTCCGTACGAGGACAAAGATGCCACCCTCAGTCCTGAAGATCTGTCCGAGATGCTGGCAGCAGGGACCAAGGAAGTTCATGAAAAGGCCGAGAACACCCAGTTCGTGAAAGATTTCCTCAGGGGGCGCATTAAGAGAGAGCTTTTCAAGCTTGGATCTGTGGCGCTTTATCACACCTACACAGCAATGGAAGAGGAAATTGAGAGGAACAAAGACCATCCCCATTTTGCCCCCTTATATTTTCCTGCAGAGCTGCACCGCCACCAGGCTCTGGCCTGTGACCTTGAGTACTTTTATGGCCCTAACTGGCAGAGCCAGGTGACGTGCTCGCAGGCCACCCAACGTTACGTGGACCGCATTCATCAAGTAGGCCGAGAGGATCCAGTTCTGCTGGTGGCCCACGCCTACACCCGCTACATGGGGGACCTTTCTGGGGGTCAGGTGCTGAGGAAGGTGGCACAG                        ]
[+] EMBL CA590895             [                                       TATTGTTGGGGAAAAGGTCAAACCTTGAAGTTGCTGCAATCCTGAAGGAAACTGCACGTCTCGGCTGAATTAACTATAGGCGCGGTCATCAGAAGATGGAAACGTCAACGGGCACATCCCAGGGATCAAACCCTCCGTACGAGGACAAAGATGCCACCCTCAGTCCTGAAGATCTGTCCGAGATGCTGGCAGCAGGGACCAAGGAAGTTCATGAAAAGGCCGAGAACACCCAGTTCGTGAAAGATTTCCTCAGGGGGCGCATTAAGAGAGAGCTTTTCAAGCTTGGATCTGTGGCGCTTTATCACACCTACACAGCAATGGAAGAGGAAATTGAGAGGAACAAAGACCATCCCCATTTTGCCCCCTTATATTTTCCTGCAGAGCTGCACCGCCACCAGGCTCTGGCCTGTGACCTTGAGTACTTTTATGGCCCTAACTGGCAGAGCCAGGTGACGTGCTCGCAGGCCACCCAACGTTACGTGGACCGCATTCATCAAGTAGGCCGAGAGGATCCAGTTCTGCTGGTGGCCCACGCCTACACCCGCTACATGGGGGACCTTTCTGGGGGTCAGGTGCTGAGGAAGGTGGCACAGAGAGCC                  ]
[+] EMBL CA590479             [                                       TATTGTTGGGGAAAAGGTCAAACCTTGAAGTTGCTGCAATCCTGAAGGAAACTGCACGTCTCGGCTGAATTAACTATAGGCGCGGTCATCAGAAGATGGAAACGTCAACGGGCACATCCCAGGGATCAAACCCTCCGTACGAGGACAAAGATGCCACCCTCAGTCCTGAAGATCTGTCCGAGATGCTGGCAGCAGGGACCAAGGAAGTTCATGAAAAGGCCGAGAACACCCAGTTCGTGAAAGATTTCCTCAGGGGGCGCATTAAGAGAGAGCTTTTCAAGCTTGGATCTGTGGCGCTTTATCACACCTACACAGCAATGGAAGAGGAAATTGAGAGGAACAAAGACCATCCCCATTTTGCCCCCTTATATTTTCCTGCAGAGCTGCACCGCCACCAGGCTCTGGCCTGTGACCTTGAGTACTTTTATGGCCCTAACTGGCAGAGCCAGGTGACGTGCTCGCAGGCCACCCAACGTTACGTGGACCGCATTCATCAAGTAGGCCGAGAGGATCCAGTTCTGCTGGTGGCCCACGCCTACACCCGCTACATGGGGGACCTTTCTGGGGGTCAGGTG                                          ]
[+] EMBL BU805406             [                                           GTTGGGGAAAAGGTCAAACCTTGAAGTTGCTGCAATCCTGAAGGAAACTGCACGTCTCGGCTGAATTAACTATAGGCGCGGTCATCAGAAGATGGAAACGTCAACGGGCACATCCCAGGGATCAAACCCTCCGTACGAGGACAAAGATGCCACCCTCAGTCCTGAAGATCTGTCCGAGATGCTGGCAGCAGGGACCAAGGAAGTTCATGAAAAGGCCGAGAACACCCAGTTCGTGAAAGATTTCCTCAGGGGGCGCATTAAGAGAGAGCTTTTCAAGCTTGGATCTGTGGCGCTTTATCACACCTACACAGCAATGGAAGAGGAAATTGAGAGGAACAAAGACCATCCCCATTTTGCCCCCTTATATTTTCCTGCAGAGCTGCACCGCCACCAGGCTCTGGCCTGTGACCTTGAGTACTTTTATGGCCCTAACTGGCAGAGCCAGGTGACGTGCTCGCAGGCCACCCAACGTTACGTGGACCGCATTCATCAAGTAGGCCGAGAGGATCCAGTTCTGCTGGTGGCCCACGCCTACACCCGCTACATGGGGGACCTTTCTGGGGGTCAGGTGCTGAGGAAGGTGGCACAGAGAGCCCTGAAGCTGCCACCTACT]


>consensus_2443#0 TCCTGGACCTTCTGTCCAATTTATGTTCATTGGTTCCGTTATTGTTGGGGAAAAGGTCAA ACCTTGAAGTTGCTGCAATCCTGAAGGAAACTGCACGTCTCGGCTGAATTAACTATAGGC GCGGTCATCAGAAGATGGAAACGTCAACGGGCACATCCCAGGGATCAAACCCTCCGTACG AGGACAAAGATGCCACCCTCAGTCCTGAAGATCTGTCCGAGATGCTGGCAGCAGGGACCA AGGAAGTTCATGAAAAGGCCGAGAACACCCAGTTCGTGAAAGATTTCCTCAGGGGGCGCA TTAAGAGAGAGCTTTTCAAGCTTGGATCTGTGGCGCTTTATCACACCTACACAGCAATGG AAGAGGAAATTGAGAGGAACAAAGACCATCCCCATTTTGCCCCCTTATATTTTCCTGCAG AGCTGCACCGCCACCAGGCTCTGGCCTGTGACCTTGAGTACTTTTATGGCCCTAACTGGC AGAGCCAGGTGACGTGCTCGCAGGCCACCCAACGTTACGTGGACCGCATTCATCAAGTAG GCCGAGAGGATCCAGTTCTGCTGGTGGCCCACGCCTACACCCGCTACATGGGGGACCTTT CTGGGGGTCAGGTGCTGAGGAAGGTGGCACAGAGAGCCCTGAAGCTGCCACCTACT



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)