Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2465 cluster # 2465       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2465#0 length = 713 sequences # 6  

consensusID : consensus_2465#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 713
fasta sequence
                              [CGCAGCACCAGTCGCCGTCAGAGACCACCCATCTAGAAACATGGCCCAGAACATGACTCTGCTGTGGGGCTCCGGCTCGCCCCCCTGCTGGCGTGTGATGATCGCCCTGGAGGAGAAGGAGATAAAAGGCTACAAGCAGAAACTGCTCTCCTTTGAGAAAATGGAGCACAAGTCAAAGGAAGTCATGGAGATGAATCCCAGAGGGCAGCTGCCTGCATTCAAATGGGGGGACAAAGTCCTGAATGAGTCCTACGCTGCCTGTTTGTTTCTGGAGAGCCAGTTCAAGTCAAATGGAACCAAGCTGACCCCCGACTGCCCCAACGAGCT-GGCACTGATGTACCAGCGCATGTTCGAGGGCTTCGCCCTCA-CCCAGAAATCCGGGATCGTCATCTACT-ACAACTACCT-GGTCCCGGA-GGGGGAGAGACACGACTCGGCAGTGAAGAGAAACAGAGAGGCCCTGAGCGCTGAAGTTAAGCTGTGGGAGGGGTATCTGGAGAAGGTAAAAGGAGATTACCTGGCANGAAGCTCTTTCACGATGGCTGATGTCTGCATTTTCCCCTCCATCAGCTACCTCTTCCATTTTGGACTGAGCATGGAGCGTTACCCTAAACTGGCAGCTTACTACAACCGTCTGAAGAGCAGACCCAGCATCAAGGCCACCTGGCCTCAATCCTGGCTGGAGAACCCGCAAAGTTCTGATCTGCTGAAGGACA]

[+] EMBL CA846712             [CGCAGCACCAGTCGCCGTCAGAGACCACCCATCTAGAAACATGGCCCAGAACATGACTCTGCTGTGGGGCTCCGGCTCGCCCCCCTGCTGGCGTGTGATGATCGCCCTGGAGGAGAAGGAGATAAAAGGCTACAAGCAGAAACTGCTCTCCTTTGAGAAAATGGAGCACAAGTCAAAGGAAGTCATGGAGATGAATCCCAGAGGGCAGCTGCCTGCATTCAAATGGGGGGACAAAGTCCTGAATGAGTCCTACGCTGCCTGTTTGTTTCTGGAGAGCCAGTTCAAGTCAAATGGAACCAAGCTGACCCCCGACTGCCCCAACGAGCT GGCACTGATGTACCAGCGCATGTTCGAGGGCTTCGCCCTCA CCCAGAAATCCGGGATCGTCATCTACT ACAACTACCT GGTCCCGGA GGGGGAGAGACACGACTCGGCAGTGAAGAGAAACAGAGAGGCCCTGAGCGCTGAAGTTAAGCTGTGGGAGGGGTATCTGGAGAAGGTAAAAGGAGATTACCTGGCANGAAGCTCTTTCACGATGGCTGATGTCTGCATTTTCCCCTCCATCAGCTACCTCTTCCATTTTGGACTGAGCATGGAGCGTTA CCTAAAC                                                                                                      ]
[+] EMBL CA846592             [                                      ACATGGCCCACAACATGACTCTGCTGTGGGGCTCCGGCTCGCCCCCCTGCTGGCGTGTGATGATCGCCCTGGAGGAGAAGGAGATAAAAGGCTACAAGCAGAAACTGCTCTCCTTTGAGAAAATGGAGCACAAGTCAAAGGAAGTCATGGAGATGAATCCCAGAGGGCAGCTGCCTGCATTCAAATGGGGGGACAAAGTCCTGAATGTTTCTTACGCTGCCTGTTTGTTTCTGGAGAGCCAGTTCAAGTCAAATGGAACCAAGCTGACCCCCGACTGCCCCAACGAGCT GGCACTGATGTACCAGCGCATGTTCGAGGGCTTCGCCCTCA CCCAGACATGCGGGATCGCCATCTACT ACAACTAC                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL FR0056482            [                                                 AACATGACTCTGCTGTGGGGCTCCGGCTCGCCCCCCTGCTGGCGTGTGATGATCGCCCTGGAGGAGAAGGAGATAAAAGGCTACAAGCAGAAACTGCTCTCCTTTGAGAAAATGGAGCACAAGTCAAAGGAAGTCATGGAGATGAATCCCAGAGGGCAGCTGCCTGCATTCAAATGGGGGGACAAAGTCCTGAATGAGTCCTACGCTGCCTGTTTGTTTCTGGAGAGCCAGTTCAAGTCAAATGGAACCAAGCTGACCCCCGACTGCCCCAACGAGCT GGCACTGATGTACCAGCGCATGTTCGAGGGGTTCGCCCTCA CCCAGAAATCCGGGATCGTCATCTACT ACAACTACCTGGGTCTCGGATGGGGGAGAGACACGACTCGGC                                                                                                                                                                                                                                                                                      ]
[+] EMBL FR0058998            [                                                  ACATGACTCTGCTGGGGGGCTGCGGCTCGGGCCCCTTCTAGCATTCCATCATCGCCCTTCAGCATAANGAGATAAAAGGCTACAAGCAGAAACTGCTCTCCTTTGAGAAAATGGAGCACAAGTCAAAGGAAGTCATGGAGATGAATCCCAGACGTCAGCTGCCTGCATTCAAATGGGGGGACAAAGTCCTGAATGAGTCCTACGCTGCCTGTCTGTTTCTGGAGAGCCAGTTCAAGTCAAAGGGAACCAAGCTGGCCCCCGGCTGCCCCAACGAGCTGGGCTCTGATGGACCAGCG                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL FR0059050            [                                                                        CGGCTCGCCGGGCTGCTGGCGTGTGATGATCGCCCTGCAGCAGAAGGAGATAAAAGGCTACAAGCAGAAACTGCTCTCCTTTGAGAAAATGGAGCACAAGTCAAAGGAAGTCATGGAGATGAATCCCAGAGGGCAGCTGCCTGCATTCAAATGGGGGGACAAAGTCCTGAATGAGTCCTACGCTGCCTGTGTGGTTCTGGAGAGCCAGTTCAAGTCAAATGGAACCAAGCTGACCCCCGACTGCCCCAACGAGCT CGCACTGATGTACCAGCGCATGTTCGAGGGCTTCCCCTTCACCCCAGAAATCCGGGATCGGCATCTACTAACAACTACCT G                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CA845574             [                                                                                                                                                                                                                                                                      TTGTTTCTGGAGAGCCAGTTCAAGTCAAATGGACCTAAGCTGACCCCCGACTGCCCCAACGAGCT GGCACTGATGTACCAGCGCATGTTCGAGGGCTTCGCCCTCA CCCAGAAATCCGGGATCGTCATCTACT ACAACTACCT GGTCCCGGA GGGGGAGAGACACGACTCGGCAGTGAAGAGAAACAGAGAGGCCCTGAGCGCTGAAGTTAAGCTGTGGGAGGGGTATCTGGAGAAGGTAAAAGGAGATTACCTGGCAGGAAGCTCTTTCACGATGGCTGATGTCTGCATTTTCCCCTCCATCAGCTACCTCTTCCATTTTGGACTGAGCATGTAGCGTTACCCTAAACTGGCAGCTTACTACAACCGTCTGAAGAGCAGACCCAGCATCAAGGCCACCTGGCCTCAATCCTGGCTGGAGAACCCGCAAAGTTCTGATCTGCTGAAGGACA]


>consensus_2465#0 CGCAGCACCAGTCGCCGTCAGAGACCACCCATCTAGAAACATGGCCCAGAACATGACTCT GCTGTGGGGCTCCGGCTCGCCCCCCTGCTGGCGTGTGATGATCGCCCTGGAGGAGAAGGA GATAAAAGGCTACAAGCAGAAACTGCTCTCCTTTGAGAAAATGGAGCACAAGTCAAAGGA AGTCATGGAGATGAATCCCAGAGGGCAGCTGCCTGCATTCAAATGGGGGGACAAAGTCCT GAATGAGTCCTACGCTGCCTGTTTGTTTCTGGAGAGCCAGTTCAAGTCAAATGGAACCAA GCTGACCCCCGACTGCCCCAACGAGCTGGCACTGATGTACCAGCGCATGTTCGAGGGCTT CGCCCTCACCCAGAAATCCGGGATCGTCATCTACTACAACTACCTGGTCCCGGAGGGGGA GAGACACGACTCGGCAGTGAAGAGAAACAGAGAGGCCCTGAGCGCTGAAGTTAAGCTGTG GGAGGGGTATCTGGAGAAGGTAAAAGGAGATTACCTGGCANGAAGCTCTTTCACGATGGC TGATGTCTGCATTTTCCCCTCCATCAGCTACCTCTTCCATTTTGGACTGAGCATGGAGCG TTACCCTAAACTGGCAGCTTACTACAACCGTCTGAAGAGCAGACCCAGCATCAAGGCCAC CTGGCCTCAATCCTGGCTGGAGAACCCGCAAAGTTCTGATCTGCTGAAGGACA



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)