Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2480 cluster # 2480       Sequences # 7       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2480#0 length = 763 sequences # 7  
consensusID : consensus_2480#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 763
fasta sequence 
                              [GGTAACTGCAACTGTATCCAAAATGGCAGGAGCTGATGGAGACGATTCTCTCTATCCTATCGCCGTTCTTATTGATGAACTGCGAAATGAGGATGTTCAGCTGAGGCTGAACAGCATCAAAAAGCTGTCCACAATCGCTTTGGCGCTCGGTGTCGAGAGGACGCGCACCGAGCTCCTTCCCTTCCTCACAGACACCATCTATGATGAAGACGAGGTTCTCCTGGCGTTGGCGGAACAACTTGGAAATTTCACCATGTTGGTGGGAGGCCCAGAATACATTCACTGTCTCTTGCCACCATTGGAGAGCCTTGCAACGGTGGAAGAGACGGTCGTCAGAGATAAAGCTGTGGAGTCCCTGCGTAAGATCTCCCAAGAACACTCTCCTGTTGACCTGGAGGTCCATTTTGAGCCCTTGGTGAAGCGGCTGGCTAGTGGTGACTGGTTCAC-TTCCCGCACATCTGCTTGTGGCCTATTTAGTGTGTGTTACCCCCGTGTCTCCAGCACTGTCAAGGCTGAGATCCGCCAACATTTTCGCACGTTGTGCTCGGATGATACTCCCATGGTCCGCCGTGCAGCAGCATCTAAACTGGGGGAGTTTGCAAAAGTTCTGGAGCTGGATTATGTAAAAAGTGACATAATTTCCCTCTTCACTGCTCTGGCCTCTGATGAGCAGGACTCGGTGCGGCTGCTTGCGGTGGAGGCCTGTGTCAGCATCGCCACTCTGCTGCCTCCAGAGGACCTGGAGACCCTGGTGATGCCAACG]

[+] EMBL CA591194             [GGTAACTGCAACTGTATCCAAAATGGCAGGAGCTGATGGAGACGATTCTCTCTATCCTATCGCCGTTCTTATTGATGAACTGCGAAATGAGGATGTTCAGCTGAGGCTGAACAGCATCAAAAAGCTGTCCACAATCGCTTTGGCGCTCGGTGTCGAGAGGACGCGCACCGAGCTCCTTCCCTTCCTCACAGACACCATCTATGATGAAGACGAGGTTCTCCTGGCGTTGGCGGAACAACTTGGAAATTTCACCATGTTGGTGGGAGGCCCAGAATACATTCACTGTCTCTTGCCACCATTGGAGAGCCTTGCAACGGTGGAAGAGACGGTCGTCAGAGATAAAGCTGTGGAGTCCCTGCGTAAGATCTCCCAAGAACACTCTCCTGTTGACCTGGAGGTCCATTTTGAGCCCTTGGTGAAGCGGCTGGCTAGTGGTGACTGGTTCAC TTCCCGCACATCTGCTTGTGGCCTATTTAGTGTGTGTT                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA591520             [ GTAACTGCAACTGTATCCAAAATGGCAGGAGCTGATGGAGACTATTCTCTCTATCCTATCGCCGTTCTTATTGATGAACTGCGAAATGAGGATGTTCAGCTGAGGCTGAACAGCATCAAAAAGCTGTCCACAATCGCTTTGGCGCTCGGTGTCGAGAGGACGCGCACCGAGCTCCTTCCCTTCCTCACAGACACCATCTATGATGAAGACGAGGTTCTCCTGGCGTTGGCGGAACGACTTGGAAATTTCACCATGTTGGTGGGAGGCCCAGAATACATTCACTGTCTCTTGCCACCATTGGAGAGCCTTGCAACGGTGGAAGAGACGGTCGTCAGAGATAAAGCTGTGGAGTCCCTGCGTAAGATCTCCCAAGAACACTCTCCTGTTGACCTGGAGGTCCATTTTGAGCCCTTGGTGAAGCGGCTGGCTAGTGGTGACTGGTTCAC TTCCCGCACATCTGCTTGTGGCCTATTTAGTGTGTGTTACCCCCGTGTCTCCAGCACTGTCAAGGCTGAGATCCGCCAACATTTTCGCACGTTGTGCTCGGATGATACTCCCATGGTCCGCCGTGCAGCAGCATCTAAACTGGGGGAGTTTGCAAAAGTTCTGGAGCTGGATTATGTAAAAAGTGACATAATTTCCCTCTTCACTGCTCTGGCCTCTGATGAGCAGGACTCGGTGCGGCTGCTTGCGGTGGAGGCCTGTGTCAGCATCGCCACTCTGCTGCCTCCAGAGGACCTGGAGACCCTGGTGATGCCAACG]
[+] EMBL CA589161             [ GTAACTGCAACTGTATCCAAAATGGCAGGAGCTGATGGAGACGATCCTCTCTATCCTATCGCCGTTCTTATTGATGAACTGCGAAATGAGGATGTTCAGCTGAGGCTGAACAGCATCAAAAAGCTGTCCACAATCGCTTTGGCGCTCGGTGTCGAGAGGACGCGCACCGAGCTCCTTCCCTTCCTCACAGACACCATCTATGATGAAGACGAGGTTCTCCTGGCGTTGGCGGAACAACTTGGAAATTTCACCATGTTGGTGGGAGGCCCAGAATACATTCACTGTCTCTTGCCACCATTGGAGAGCCTTGCAACGGTGGAAGAGACGGTCGTCAGAGATAAAGCCGTGGAGTCCCTGCGTAAGATCTCCCAAGAACACTCTCCTGTTGACCTGGAGGTCCATTTTGAGCCCTTGGTGAAGCGGCTGGCTAGTGGTGACTGGTTCAC TTCCCGCACATCTGCTTGTGGCCTATTTAGTGTGTGTTACCCCCGTGTCTCCAGCACTGTCAAGGCTGAGATCCGCCAACATTTTCGCACGTTGTGCTCGGATGATACTCCCATGGTCCGCCGTGCAACAGCATCTAAATTGGGG                                                                                                                                                                           ]
[+] EMBL CA591135             [                   AAAATGGCAGGAGCTGATGGAGACGATTCTCTCTATCCTATCGCCGTTCTTATTGATGAACTGCGAAATGAGGATGTTCAGCTGAGGCTGAACAGCATCAAAAAGCTGTCCACAATCGCTTTGGCGCTCGGTGTCGAGAGGACGCGCACCGAGCTCCTTCCCTTCCTCACAGACACCATCTATGATGAAGACGAGGTTCTCCTGGCGTTGGCGGAACAACTTGGAAATTTCACCATGTTGGTGGGAGGCCCAGAATACATTCACTGTCTCTTGCCACCATTGGAGAGCCTTGCAACGGTGGAAGAGACGGTCGTCAGAGATAAAGCCGTGGAGTCCCTGCGTAAGATCTCCCAAGAACACTCTCCTGTTGACCTGGAGGTCCATTTTGAGCCCTTGGTGAAGCGGCTGGCTAGTGGTGACTGGTTCAC TTCCCGCACATCTGCTTGTGGCCTATTTAGTGTGTGTTACCCCCGTGTCTCCAGCACTGTCAAGGCTGAGATCCGCCAACATTTTCGCACGTTGTGCTCGGATGATACTCCCATGGTCCGCCGTGCAGCAGCATCTAAACTGGGGGAGTTTGCAAAAGTTCTGGAGCTGGATTATGTAAAAAGTGACATA                                                                                                                              ]
[+] EMBL BU806941             [                     AATGGCAGGAGCTGATGGAGACGATTCTCTCTATCCTATCGCCGTTCTTATTGATGAACTGCGAAATGAGGATGTTCAGCTGAGGCTGAACAGCATCAAAAAGCTGTCCACAATCGCTTTGGCGCTCGGTGTCGAGAGGACGCGCACCGAGCTCCTTCCCTTCCTCACAGACACCATCTATGATGAAGACGAGGTTCTCCTGGCGTTGGCGGAACAACTTGGAAATTTCACCATGTTGGTGGGAGGCCCAGAATACATTCACTGTCTCTTGCCACCATTGGAGAGCCTTGCAACGGTGGAAGAGACGGTCGTCAGAGATAAAGCTGTGGAGTCCCTGCGTAAGATCTCCCAAGAACACTCTCCTGTTGACCTGGAGGTCCATTTTGAGCCCTTGGTGAAGCGGCTGGCTAGTGGTGACTGGTTCAC TTCCCGCACATCTGCTTGTGGCCTATTTAGTGTGTGTTACCCCCGTGTCTCCAGCACTGTCAAGGCTGAGATCCGCCAACATTTTCGCACGTTGTGCTCGGATGATACTCCCATGGTCCGCCGTGCAGCAGCATCTAAACTGGGGGAGTTTGCAAAAGTT                                                                                                                                                            ]
[+] EMBL FR0059367            [                                                 CTCTATCCTATCGCCGTTCTTATTGATGAACTGCGAAATGAGGAGGTTCAGCTGAGGCTGAACAGCATCAAAAAGCTGTCCACAATCGCTTTGGCGCTCGGTGTCGAGAGGACGCGCACCGAGCTCCTTCCCTTCCTCACAGACACCATCTATGATGAAGACGAGGTTCTCCTGGCGTTGGCGGAACAACTTGGAAATTTCACCATGTTGGNGGGAGGCCCAGAATACATTCACTGTCTCTTGCCACCATTGGAGAGCCTTGCAACGGTGGAAGAGACGGTCGTCAGAGATAAAGCTGTGGAGTCCCTGCGTAAGATCTCCCAAGAACACTCTCCTGTTGACCTGGA                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL FR0059745            [                                                            CGCCGTTCTTATTGATGAACTGCGAAATGAGGATGTTCAGCTGAGGCTGAACAGCATCAAAAAGCTGTCCACAATCGCTTTGGCGCTCGGTGTCGAGAGGACGCGCACCGAGCTCCTTCCCTTCCTCACAGACACCATCTATGATGAAGACGAGGTTCTCCTGGCGTTGGCGAAACAACTTGGAAATTTCACCATGTTGGTGGGAGGCCCAGAATACATTCACTGTCTCTTGCCACCATTGGAGAGCCTTGCAACGGTGGAAGAGACGGTCGTCAGAGATAAAGCTGTGGAGTCCCTGCGTAAGATCTCCCAAGAACACTCTCCTGTTGACCTGGAGGCCCATTTTGAGCCCTTGGTGAAGCGGCTGGCTAGTGGTGACTGGTTCACTTTCCCGCACATC                                                                                                                                                                                                                                                                                                                ]




>consensus_2480#0
GGTAACTGCAACTGTATCCAAAATGGCAGGAGCTGATGGAGACGATTCTCTCTATCCTAT
CGCCGTTCTTATTGATGAACTGCGAAATGAGGATGTTCAGCTGAGGCTGAACAGCATCAA
AAAGCTGTCCACAATCGCTTTGGCGCTCGGTGTCGAGAGGACGCGCACCGAGCTCCTTCC
CTTCCTCACAGACACCATCTATGATGAAGACGAGGTTCTCCTGGCGTTGGCGGAACAACT
TGGAAATTTCACCATGTTGGTGGGAGGCCCAGAATACATTCACTGTCTCTTGCCACCATT
GGAGAGCCTTGCAACGGTGGAAGAGACGGTCGTCAGAGATAAAGCTGTGGAGTCCCTGCG
TAAGATCTCCCAAGAACACTCTCCTGTTGACCTGGAGGTCCATTTTGAGCCCTTGGTGAA
GCGGCTGGCTAGTGGTGACTGGTTCACTTCCCGCACATCTGCTTGTGGCCTATTTAGTGT
GTGTTACCCCCGTGTCTCCAGCACTGTCAAGGCTGAGATCCGCCAACATTTTCGCACGTT
GTGCTCGGATGATACTCCCATGGTCCGCCGTGCAGCAGCATCTAAACTGGGGGAGTTTGC
AAAAGTTCTGGAGCTGGATTATGTAAAAAGTGACATAATTTCCCTCTTCACTGCTCTGGC
CTCTGATGAGCAGGACTCGGTGCGGCTGCTTGCGGTGGAGGCCTGTGTCAGCATCGCCAC
TCTGCTGCCTCCAGAGGACCTGGAGACCCTGGTGATGCCAACG

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)