Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2545 cluster # 2545       Sequences # 7       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2545#0 length = 1001 sequences # 7  
consensusID : consensus_2545#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1001
fasta sequence 
                              [TAGAGGTACAAAACAGTTCTTTTCCATAGCTTACATTTGTTAACTGACAAAGTAAATGATCTCTGTTTCACTGACCTATTTATTTACAAAGTAAACAGATTTGTGCTTTGATCGTGTGGCAGTTTGGACGAGTTCAAAGCTTAGCTGGGTTTACGTTTAGGTCTGTCCTCTCGATTATCTTGGATCAAACAACAGACATGGAGGATCAATCAACGCAAAAGTTTTCATCCCTGAAAGAGGAGCTATGCTTCTGGAAGGAACAGGCGGAGAGACAGCAACAACGGGCCGATGAGTCTCAGGCAGAGCTGGAAGAGTTTCAACAGATGAGTCGGGACTATGAAGCGGAGCTGGAAACGGAGCTAAAACAGTGTGAAAGCCGAAATAAAGAACTGCTGTTAGACAAAAACCGCCTCTGCATTGAACTGGAAAATCTAAAGGAGAAATTTGAGACGCAGCACTCCGAGGCGTTCAGGCACATCTCGACGCTGGAGGAAGACTTGGCACAAACCAGAGCCGTGCGAGATCACCTGCAGAAATACATCAGAGAGC-TGGAGCAGGCCAACGACGACCTGGAGAGGACCAAGAGAGTGACCATCATGTCACTGGAGGACTTTGAACAGCGCATGAACCACGTGATAGAGCGGAATGCCTTTCTGGAGAGCGAGTTGGACGAGAAAGAGAACCTGCTGGAGTCAGTTCAGAGGCTGAAGGATGAAGCGAGAGACCTACGCCAGGAGCTGGCCGTGCGTCAGAAAGAGAGACGGCCGTCTAGCAGCCTGGGAAAAGACGCAGATCGGACGGACGGCCCGTGCCCTGCAGTCGGAAGCCCTTCCATTCCCATCACACCCTCCAAGCCCATCTGTGCATTTACCACTCCCCCAGCTTCCAGCATCCGAAGAGGGGATGGGCTGACTGGGACTCCTCTCACTATGTCTACTCGAATATCTGCGCTCAACATCGTGGGAGAACTGCTGCGAAAAGTCGGAAATCTGGAGTCAAAG]

[+] EMBL FR0060220            [TAGAGGTACAAAACAGTTCTTTTCCATAGCTTACATTTGTTAACTGACAAAGTAAATGATCTCTGTTTCACTGACCTATTTATTTACAAAGTAAACAGATTTGTGCTTTGATCGTGTGGCAGTTTGGACGAGTTCAAAGCTTAGCTGGGTTTACGTTTAGGTCTGTCCTCTCGATTATCTTGGATCAAACAACAGACATGGAGGATCAATCAACGCAAAAGTTTTCATCCCTGAAAGAGGAGCTATGCTTCTGGAAGGAACAGGCGGAGAGACAGCAACAACGGGCCGATGAGTCTCAGGCAGAGCTGGAAGAG TTCAACAGATGAGTCGGGACTATGAAGCGGAGCTGGAAACGGAGCTAAAACAGTGTGAAAGCCGAAATAAAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL FR0062350            [                                                                                                                                                              AGGTCTGTCCTCTCGATTATCTTGGATCAAACAACAGACATGGAGGATCAATCAACGCAAAAGTTTTCATCCCTGAAAGAGGAGCTATGCTTCTGGAAGGAACAGGCGGAGAGACAGCAACAACGGGCCGATGAGTCTCAGGCAGAGCTGGAAGAGTTTCAACAGATGAGTCGGGACTATGAAGCGGAGCTGGAAACGGAGCTAAAACAGTGTGAAAGCCGAAATAAAGAACTGCTGTTAGACAAAAACCGCCTCTGCATTGAACTGGAAAATCTAAAGGAGAAATTTGAGACGCAACACTCCGAGGCGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA333268             [                                                                                                                                                                                                               AATCAACGCAAAAGTTTTCATCCCTGAAAGAGGAGCTATGCTTCTGGAAGGAACAGGCGGAGAAACAGCAACAACGGGCCGATGAGTCTCAGGCAGAGCTGGAAGAGTTTCAACAGATGAGTCGGGACTATGAAGCGGAGCTGGAAACGGAGCTAAAACAGTGTGAAAGCCGAAATAAAGAACTGCTGTTAGACAAAAACCGCCTCTGCATTGAACTGGAAAATCTAAAGGAGAAATTTGAGACGCAGCACTCCGAGGCGTTCAGGCACATCTCGACGCTGGAGGAAGACTTGGCACAAACCAGAGCCGTGCGAGATCACCTGCAGAAATACATCGGAGAGC TGGAGCAGGCCAACGACGACCTGGAGAGGACCAAGAGAGTGACCATCATGTCACTGGAGGACTTTGAACAGCGCATGAACCACGTGATAGAGCGGAATGCCTTTCTGGAGAGCGAGTTGGACGAGAAAGAGAACCTGCTGGAGTCAGTTCAGAGGCTGAAGGATGAAGCGAGAGACCTACGCCAGGAGCTGGCCGTGCGTCAGAAAGAGAGACGGCCGTCTAGCAGCCTGGGAAAAGAC                                                                                                                                                                                                                     ]
[+] EMBL BU807569             [                                                                                                                                                                                                                 TCAACGCAAAAGTTTTCATCCCTGAAAGAGGAGCTATGCTTCTGGAAGGAACAGGCGGAGAGACAGCAACAACGGGCCGATGAGTCTCAGGCAGAGCTGGAAGAGTTTCAACAGATGAGTCGGGACTATGAAGCGGAGCTGGAAACGGAGCTAAAACAGTGTGAAAGCCGAAATAAAGAACTGCTGTTAGACAAAAACCGCCTCTGCATTGAACTGGAAAATCTAAAGGAGAATTTTGAGACGCAGCACTCCGAGGCGTTCAGGCACATCTCGACGCTGGAGGAAGACTTGGCACAAACCAGAGCCGTGCGAGATCACCTGCAGAAATACATCAGAGAGC TGGAGCAGGCCAACGACGACCTGGAGAGGACCAAGAGAGTGACCATCATGTCACTGGAGGACTTTGAACAGCGCATGAACCACGTGATAGAGCGGAATGCCTTTCTGGAGAGCGAGTTGGACGAGAAAGAGAACCTGCTGGAGTCAGTTCAGAGGCTGAAGGATGAAGCGAGAGACCTACGCCAGGAGCTGGCCGTGCGTCAGAAAGAGAGACGGCCGTCTAGCAGCCTGGGAAAAGACGCAGATCGGACGGACGGCCCGTGCCCTGCAGTCGGAAGC                                                                                                                                                                              ]
[+] EMBL BU807712             [                                                                                                                                                                                                                        AAAAGTTTTCATCCCTGATTTA CCCCTATGCTTCTGGAAGGAACAGGCGGAGAGACAGCAACAACGGGCCGATGAGTCTCAGGCAGAGCTGGAAGAGTTTCAACAGATGAGTCGGGACTATGAAGCGGAGCTGGAAACGGAGCTAAAACAGTGTGAAAGCCGAAATAAAGAACTGCTGTTAGACAAAAACCGCCTCTGCATTGAACTGGAAAATCTAAAGGAGTTATTTGAGACGCAGCACTCCGAGGCGTTCAGGCACATCTCGACGCTGGAGGAAGACTTGGCACAAACCAGAGCCGTGCGAGATCACCTGCAGAAATACATCAGAGAGC TGGAGCAGGCCAACGACGACCTGGAGAGGACCAAGAGAGTGACCATCATGTCACTGGAGGACTTTGAACAGCGCATGAACCACGTGATAGAGCGGAATGCCTTTCTGGAGAGCGAGTTGGACGAGAAAGAGAACCTGCTGGAGTCAGTTCAGAGGCTGAAGGATGAAGCGAGAGACCTACGCCAGGAGCTGGNCGTGCGTCAGAAAGAGAGACGGCCGTCTAGCAGCCCTGGGAAAGAC                                                                                                                                                                                                                     ]
[+] EMBL FR0060179            [                                                                                                                                                                                                                                                                                                                                                          GCTGGAAACGGAGCTAAAACAGTGTGAAAGCCGAAATAAAGAACTGCTGTTAGACAAAAACCGCCTCTGCATTGAACTGGAAAATCTAAGGGAGAAATTTGAGACGCAGCACTCCGAGGCGTTCAGGCACATCTCGACGCTGGAGGAAGACTTGGCACAAACCAGAGCCGTGCGAGATCACCTGCAGAAATACATCAGAGAGCNTGGAGCA GCCAACGACGACCTGGAGAGGACCAAGAGAGTGACCATCATGTCACTGGAGGACTTTGAACAGCG                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL FR0060485            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGTGACCATCATGTCACTGGAGGACTTTGAACAGCGCATGAACCACGTGATAGAGCGGAATGCCTTTCTGGAGAGCGAGTTGGACGAGAAAGAGAACCTGCTGGAGTCAGTTCAGAGGCTGAAGGATGAAGCGAGAGACCTACGCCAGGAGCTGGCCGTGCGTCAGAAAGAGAGACGGCCGTCTAGCAGCCTGGGAAAAGACGCAGATCGGACGGACGGCCCGTGCCCTGCAGTCGGAAGCCCTTCCATTCCCATCACACCCTCCAAGCCCATCTGTGCATTTACCACTCCCCCAGCTTCCAGCATCCGAAGAGGGGATGGGCTGACTGGGACTCCTCTCACTATGTCTACTCGAATATCTGCGCTCAACATCGTGGGAGAACTGCTGCGAAAAGTCGGAAATCTGGAGTCAAAG]




>consensus_2545#0
TAGAGGTACAAAACAGTTCTTTTCCATAGCTTACATTTGTTAACTGACAAAGTAAATGAT
CTCTGTTTCACTGACCTATTTATTTACAAAGTAAACAGATTTGTGCTTTGATCGTGTGGC
AGTTTGGACGAGTTCAAAGCTTAGCTGGGTTTACGTTTAGGTCTGTCCTCTCGATTATCT
TGGATCAAACAACAGACATGGAGGATCAATCAACGCAAAAGTTTTCATCCCTGAAAGAGG
AGCTATGCTTCTGGAAGGAACAGGCGGAGAGACAGCAACAACGGGCCGATGAGTCTCAGG
CAGAGCTGGAAGAGTTTCAACAGATGAGTCGGGACTATGAAGCGGAGCTGGAAACGGAGC
TAAAACAGTGTGAAAGCCGAAATAAAGAACTGCTGTTAGACAAAAACCGCCTCTGCATTG
AACTGGAAAATCTAAAGGAGAAATTTGAGACGCAGCACTCCGAGGCGTTCAGGCACATCT
CGACGCTGGAGGAAGACTTGGCACAAACCAGAGCCGTGCGAGATCACCTGCAGAAATACA
TCAGAGAGCTGGAGCAGGCCAACGACGACCTGGAGAGGACCAAGAGAGTGACCATCATGT
CACTGGAGGACTTTGAACAGCGCATGAACCACGTGATAGAGCGGAATGCCTTTCTGGAGA
GCGAGTTGGACGAGAAAGAGAACCTGCTGGAGTCAGTTCAGAGGCTGAAGGATGAAGCGA
GAGACCTACGCCAGGAGCTGGCCGTGCGTCAGAAAGAGAGACGGCCGTCTAGCAGCCTGG
GAAAAGACGCAGATCGGACGGACGGCCCGTGCCCTGCAGTCGGAAGCCCTTCCATTCCCA
TCACACCCTCCAAGCCCATCTGTGCATTTACCACTCCCCCAGCTTCCAGCATCCGAAGAG
GGGATGGGCTGACTGGGACTCCTCTCACTATGTCTACTCGAATATCTGCGCTCAACATCG
TGGGAGAACTGCTGCGAAAAGTCGGAAATCTGGAGTCAAAG

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)