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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_255#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 610 fasta sequence
[AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTCGTGCCGAATTCGGCACGAGTCGACCTGGAGCAGAAACACCGAGGACACAAAGAGAGAGAGGTCACCCACACCCGAACTCGGCAACCAGTGGAATGGCAACGGCGAGCACCTCAGGGCAGAGCAGCTTCGGACTCGGCAGGTTTAAGAAGAACCCTGGACTCATGGATCAGATAGGCCAGTTCTTTGGAGGAGACAAAAAGAAACGGAGCAAGGGCTCCTTCCGGGGCCACCTCTCCTCCTCGCCCCAGCAGTCCTCCGCCCGCCGCCGGACCAATGAAAATGCTCTGTTGCATTTCTTCAGGAGCTTTGGAGAACCCAAGTCCCGTCCACCCCCTAAACGCTGGAGCACCATCTTCTAAGCTCTCCACCCAAGACCTGAGATCAGACAGGCCAGGATGAAGGCGGTCCAGACCTGCAAGTGACAGACTCCCGACCTCGACCAGTGTTAACCCACTAACGCCGTTCAGACGGGGACAGGAAGTCCTGCTGCTGTCACGTCATCGGTCATGTT]
[+] EMBL CA330854 [AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTCGTGCCGAATTCGGCACGAGTCGACCTGGAGCAGAAACACCGAGGACACAAAGAGAGAGAGGTCACCCACACCCGAACTCGGCAACCAGTGGAATGGCAACGGCGAGCACCTCAGGGCAGAGCAGCTTCGGACTCGGCAGGTTTAAGAAGAACCCTGGACTCATGGATCAGATAGGCCAGTTCTTTGGAGGAGACAAAAAGAAACGGAGCAAGGGCTCCTTCCGGGGCCACCTCTCCTCCTCGCCCCAGCAGTCCTCCGCCCGCCGCCGGACCAATGAAAATGCTCTGTTGCATTTCTTCAGGAGCTTTGGAGAACCCAAGTCCCGTCCACCCCCTAAACGCTGGAGCACCATCTTCTAAGCTCTCCACCCAAGACCTGAGATCAGACAGGCCAGGATGAAGGCGGTCCAGACCTGCAAGTGACAGACTCCCGACCTCGACCAGTGTTAACCCACTAACGCCGTTCAGACGGGGACAGGAAGTCCTGCTGCTGTCACGTCATCGGTCATGTT]
consensusID : consensus_255#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 565 fasta sequence
[GCAACCAGTGGAATGGCAACGGCGAGCTCCTCACGGCAGAGCAGCTTCGGACTCGGCAGGAAGAAGAAGAACCCTGGACTCATGGATCAGATAGGCCAGTTCTTTGGAGGAGACAAAAAGAAACGGAGCAAGGGCTCCTTCCGGGGCCACCTCTCCTCCTCGCCCCAGCAGTCCTCCGCCCGCCGCCGGACCAATGAAAATGCTCTGTTGCATTTCTTCAGGAGCTTTGTTTCCTCTCCTCGTCCTAAATCCAGGGCCTCCTCGCCGCGGACCGAGAGCGCCAAGTCACCAGTGAGGAAACGCAGAGACCAAAGCACGCTGTCCAGACTCTTCAACCTGTGACCCCCCACCTCAGAGATCAGGAGAACCCAAGTCCCGTCCACCCCCTAAACGCTGGAGCACCATCTTCTAAGCTCTCCACCCAAGACCTGAGATCAGACAGGCCAGGATGAAGGCGGTCCAGACCTGCAAGTGACAGACTCCCGACCTCGACCAGTGTTAACCCACTAACGCCGTTCAGACGGGGACAGGAAGTCCTGCTGCTGTCACGTCATCGGTCATGTTT]
[+] EMBL CA330052 [GCAACCAGTGGAATGGCAACGGCGAGCTCCTCACGGCAGAGCAGCTTCGGACTCGGCAGGAAGAAGAAGAACCCTGGACTCATGGATCAGATAGGCCAGTTCTTTGGAGGAGACAAAAAGAAACGGAGCAAGGGCTCCTTCCGGGGCCACCTCTCCTCCTCGCCCCAGCAGTCCTCCGCCCGCCGCCGGACCAATGAAAATGCTCTGTTGCATTTCTTCAGGAGCTTTGTTTCCTCTCCTCGTCCTAAATCCAGGGCCTCCTCGCCGCGGACCGAGAGCGCCAAGTCACCAGTGAGGAAACGCAGAGACCAAAGCACGCTGTCCAGACTCTTCAACCTGTGACCCCCCACCTCAGAGATCAGGAGAACCCAAGTCCCGTCCACCCCCTAAACGCTGGAGCACCATCTTCTAAGCTCTCCACCCAAGACCTGAGATCAGACAGGCCAGGATGAAGGCGGTCCAGACCTGCAAGTGACAGACTCCCGACCTCGACCAGTGTTAACCCACTAACGCCGTTCAGACGGGGACAGGAAGTCCTGCTGCTGTCACGTCATCGGTCATGTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_255#0 AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 60
consensus_255#1 ------------------------------------------------------------
consensus_255#0 AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTCGTGCCGAATTCGGCACGAGTC 120
consensus_255#1 ------------------------------------------------------------
consensus_255#0 GACCTGGAGCAGAAACACCGAGGACACAAAGAGAGAGAGGTCACCCACACCCGAACTCGG 180
consensus_255#1 -----------------------------------------------------------G 1
*
consensus_255#0 CAACCAGTGGAATGGCAACGGCGAGCACCTCAGGGCAGAGCAGCTTCGGACTCGGCAGGT 240
consensus_255#1 CAACCAGTGGAATGGCAACGGCGAGCTCCTCACGGCAGAGCAGCTTCGGACTCGGCAGGA 61
************************** ***** **************************
consensus_255#0 TTAAGAAGAACCCTGGACTCATGGATCAGATAGGCCAGTTCTTTGGAGGAGACAAAAAGA 300
consensus_255#1 AGAAGAAGAACCCTGGACTCATGGATCAGATAGGCCAGTTCTTTGGAGGAGACAAAAAGA 121
**********************************************************
consensus_255#0 AACGGAGCAAGGGCTCCTTCCGGGGCCACCTCTCCTCCTCGCCCCAGCAGTCCTCCGCCC 360
consensus_255#1 AACGGAGCAAGGGCTCCTTCCGGGGCCACCTCTCCTCCTCGCCCCAGCAGTCCTCCGCCC 181
************************************************************
consensus_255#0 GCCGCCGGACCAATGAAAATGCTCTGTTGCATTTCTTCAGGAGCTTTG------------ 408
consensus_255#1 GCCGCCGGACCAATGAAAATGCTCTGTTGCATTTCTTCAGGAGCTTTGTTTCCTCTCCTC 241
************************************************
consensus_255#0 ------------------------------------------------------------
consensus_255#1 GTCCTAAATCCAGGGCCTCCTCGCCGCGGACCGAGAGCGCCAAGTCACCAGTGAGGAAAC 301
consensus_255#0 ------------------------------------------------------------
consensus_255#1 GCAGAGACCAAAGCACGCTGTCCAGACTCTTCAACCTGTGACCCCCCACCTCAGAGATCA 361
consensus_255#0 -GAGAACCCAAGTCCCGTCCACCCCCTAAACGCTGGAGCACCATCTTCTAAGCTCTCCAC 467
consensus_255#1 GGAGAACCCAAGTCCCGTCCACCCCCTAAACGCTGGAGCACCATCTTCTAAGCTCTCCAC 421
***********************************************************
consensus_255#0 CCAAGACCTGAGATCAGACAGGCCAGGATGAAGGCGGTCCAGACCTGCAAGTGACAGACT 527
consensus_255#1 CCAAGACCTGAGATCAGACAGGCCAGGATGAAGGCGGTCCAGACCTGCAAGTGACAGACT 481
************************************************************
consensus_255#0 CCCGACCTCGACCAGTGTTAACCCACTAACGCCGTTCAGACGGGGACAGGAAGTCCTGCT 587
consensus_255#1 CCCGACCTCGACCAGTGTTAACCCACTAACGCCGTTCAGACGGGGACAGGAAGTCCTGCT 541
************************************************************
consensus_255#0 GCTGTCACGTCATCGGTCATGTT- 610
consensus_255#1 GCTGTCACGTCATCGGTCATGTTT 565
***********************
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |