Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2553 cluster # 2553       Sequences # 7       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2553#0 length = 735 sequences # 7  
consensusID : consensus_2553#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 735
fasta sequence 
                              [TGCAGTCTCCACCAGGCTCTCCTCCAACATGGCCTCCTACAGCTCCTCCGCCCAAACTGCCTCCTCGTATCGCCGCACTTTTGGCCA-AGGCACTTTTGCCTCGCCCTCTCTCAACCGCTCCATGCTGGGCCACGGCCGCAGCAGTGGCGGCGGAGGTGGCCACGTCACCTCCAGGGTCTATGAGGTGACCCGCAGCAGCGCGACGCCCGCCTACCGGGTCTCATCCAGTTGCTATGGGAAGCC-CCTTGGGGCCTCCAGAGTTTCTGTAGGGCGCTCCTACGCCGGCATGGGCGAGATGCTTGACTTCAGCTTGGCCGACGCCGTCAACCAGGAGTTCCTGACCACAAGGACTAACGAGAAGGCCGAACTGCAGCACCTCAATGACCGTTTTGCCAGCTACATTGAGAA-GGTCCGC-TTCCTGGAGCAGCAAAACCAGGGGCTGACGGTGGAGGTGGAGCGCCTGCGAGGACGCGAGCCCACGCGCGTCTCCGACATGTACGAGGAGGAGATGAACGACCTGAGGAGGCAGGTGGAGATCCTGACCAATCAGAGGTCACACATCGAGGTGGAGCGGGACAATCTCGCCGATGACCTGGACAAGCTGAAACTCAGACTCCAAGAAGAAATCCTTCAAAAAGAGGACGCAGAAAACAACCTTGCAGCTTTCAGGGCGGACGTGGACGCTGCCACTCTGGCTCGTCTGGACCTGGAACGACGCATCGAGACGCTGCAGGA]

[+] EMBL BU807618             [TGCAGTCTCCACCAGGCTCTCCTCCAACATGGCCTCCTACAGCTCCTCCGCCCAAACTGCCTCCTCGTATCGCCGCACTTTTGGCCA AGGCACTTTTGCCTCGCCCTCTCTCAACCGCTCCATGCTGGGCCACGGCCGCAGCAGTGGCGGCGGAGGTGGCCACGTCACCTCCAGGGTCTATGAGGTGACCCGCAGCAGCGCGACGCCCGCCTACCGGGTCTCATCCAGTTGCTATGGGAATCCTTTTTGGGGCCTCCAGAGTTTCTGTAGGGCGCTCCTACGCCGGCATGGGCGAGATGCTTGACTTCAGCTTGGCCGACGCCGTCAACCAGGAGTTCCTGACCACAAGGACTAACGAGAAGGCCGAACTGCAGCACCTCAATGACCGTTTTGCCAGCTACATTGAGAA GGTCCGC TTCCTGGAGCAGCAAAACCAGGGGCTGACGGTGGAGGTGGAGCGCCTGCGAGGACGCGAGCCCACGCGCGTCTCCGACATGTACGAGGAGGAGATGAACGACCTGAGGAGGCAGGTGGAGATCCTGACCAATCAGAGGTCACACATCGAGGTGGAGCGGGACAATCTCGCCGATGACCTGGACAAGCTGAAACTCAGACTCCAAGAAGAAATCCTTCAA                                                                                                     ]
[+] EMBL CA589840             [TGCAGTCTCCACCAGGCTCTCCTCCAACATGGCCTCCTACAGCTCCTCCGCCCAAACTGCCTCCTCGTATCGCCGCACTTTTGGCCA AGGCACTTTTGCCTCGCCCTCTCTCAACCGCTCCATGCTGGGCCACGGCCGCAGCAGTGGCGGCGGAGGTGGCCACGTCACCTCCAGGGTCTATGAGGTGACCCGCAGCAGCGCGACGCCCGCCTACCGGGTCTCATCCAGTTGCTATGGGAAGCC CCTTGGGGCCTCCAGAGTTTCTGTAGGGCGCTCCTACGCCGGCATGGGCGAGATGCTTGACTTCAGCTTGGCCGACGCCGTCAACCAGGAGTTCCTGACCACAAGGACTAACGAGAAGGCCGAACTGCAGCACCTCAATGACCGTTTTGCCAGCTACATTGAGAA GGTCCGC TTCCTGGAGCAGCAAAACCAGGGGCTGACGGTGGAGGTGGAGCGCCTGCGAGGACGCGAGCCCACGCGCGTCTCCGACATGTACGAGGAGGAGATGAACGACCTGAGGAGGCAGGTGGAGATCCTGACCAATCAGAGGTCACACATCGAGGTGGAGCGGGACAATCTCGCCGATGACCTGGACAAGCTGAAACTCAGACTCCAAGAAGAAATCCTT                                                                                                        ]
[+] EMBL CA588218             [ cgATTCTCCACCAGGCTCTCCTCCAACATGGCCTCCTACAGCTCCTCCGCCCAAACTGCCTCCTCGTATCGCCGCACTTTTGGCCA AGGCACTTTTGCCTCGCCCTCTCTCAACCGCTCCATGCTGGGCCACGGCCGCAGCAGTGGCGGCGGAGGTGGCCACGTCACCTCCAGGGTCTATGAGGTGACCCGCAGCAGCGCGACGCCCGCCTACCGGGTCTCATCCAGTTGCTATGGGAAGCC CCTTGGGGCCTCCAGAGTTTCTGTAGGGCGCTCCTACGCCGGCATGGGCGAGATGCTTGACTTCAGCTTGGCCGACGCCGTCAACCAGGAGTTCCTGACCACAAGGACTAACGAGAAGGCCGAACTGCAGCACCTCAATGACCGTTTTGCCAGCTACATTGAGAA GGTCCGC TTCCTGGAGCAGCAAAACCAGGGGCTGACGGTGGAGGTGGAGCGCCTGCGAGGACGCGAGCCCACGCGCGTCTCCGACATGTACGAGGAGGAGATGAACGACCTGAGGAGGCAGGTGGAGATCCTGACCAATCAGAGGTCACACATCGAGGTGGAGCGGGACAATCTCGCCGATGACCTGGACAAGCTGAAACTCAGACTCCAAGAAGAAATCCTTCAAAAAGAGGACGCAGAAAACAACCTTGCAGCTTTCAGGGCGGACGTGGACGCTGCCACTCTGGCTCGTCTGGACCTGGAACGACGCATCGAGACGCTGCAGGA]
[+] EMBL FR0059305            [                                   CCTACAGCTCCTCCGCCCAAACTGCCTCCTCGTATCGCCGCACTTTTGGCCA AGGCACTTTTGCCTCGCCCTCTCTCAACCGCTCCATGCTGGGCCACGGCCGCAGCAGTGGCGGCGGAGGTGGCCACGTCACCTCCAGGGTCTATGAGGTGACCCGCAGCAGCGCGACGCCCGCCTACCGGGTCTCATCCAGTTGCTATGGGAAGCC CCTTGGGGCCTCCAGAGTTTCTGTAGGGCGCTCCTACGCCGGCATGGGCGAGATGCTTGACTTCAGCTTGGCCGACGCCGTCAACCAGGAGTTCCTGACCACAAGGACTAACGAGAAGGCCGAACTGCAGCACCTCAATGACCGTTTTGCCAGCTACATTGAGAAGGGCCCGC TTTCTGGAGCAAC                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL FR0059273            [                                            CCTCCGCCCAAACTGCCTCCTCGTATCGCCGCACTTTTGGCCA AGGCACTTTTGCCTCGCCCTCTCTCAACCGCTCCATGCTGGGCCACGGCCGCAGCAGTGGCGGCGGAGGTGGCCACGTCACCTCCAGGGTCTATGAGGTGACCCGCAGCAGCGCGACGCCCGCCTACCGGGTCTCATCCAGTTGCTATGGGAAGCC CCTTGGGGCCTCCAGAGTTTCTGTAGGGCGCTCCTACGCCGGCATGGGCGAGATGCTTGACTTCAGCTTGGCCGACGCCGTCAACCAGGAGTTCCTGACCACAAGGACTAACGAGAAGGCCGAACTGCAGCACCTCAATGAACCGTTTGCCAGCTACATTGAGAA GGGCCGC TTCCTGGAGCAGCAAAACCAGGGGCTGA                                                                                                                                                                                                                                                                                                    ]
[+] EMBL FR0060399            [                                                       ACTGCCTCCTCGTATCGCCGCACTTTTGGCGAGAGGCACTTTTGCCTCGCCCTCTCTCAACCGCTCCATGCTGGGCCACGGCCGCAGCAGTGGCGGCGGAGGTGGCCACGTCACCTCCAGGGTCTATGAGGTGACCCGCAGCAGCGCGACGCCCGCCTACCGGGTCTCATCCAGTTGCTATGGGAAGCC CCTTGGGGCCTCCAGAGTTTCTGTAGGGCGCTCCTACGCCGGCATGGGCGAGATGCTTGACTTCAGCTTGGCCGACGCCGTCAACCAGGAGTTCCTGACCACAAGGACTAACGAGAAGGCCGAACTGCAGCACCTCAATGACCGT                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL FR0059700            [                                                          GCCTCCTCGTATCGCCGCACTTTTGGCCA AGGCAGTTTTGCCTCGCCCTCTCTCAACCGCTCCATGCTGGGCCACGGCCGCAGCAGTGGCGGCGGAGGTGGCCACGTCACCTCCAGGGTCTATGAGATGACCCGCAGCAGCGCGACGCCCGCCTACCGGGTCTCATCCAGCTGCTATGGGAAGCC CCTTGGGGCCTCCAGAGGTTCTGTAGGGCGCTCCTACGCCGGCATGGGCGAGATGCTTGACTTCAGCTTGGCCGACGCCGTCAACCAGGAGGTCCTGACCACAAGGACTAACGAGAAGGCCGAACTGCAGCACCTCAATGACCGTTGTGCCAGCTACATTGAGAA GGTCCGCTTTCCTGGAGCAGCCA                                                                                                                                                                                                                                                                                                                 ]




>consensus_2553#0
TGCAGTCTCCACCAGGCTCTCCTCCAACATGGCCTCCTACAGCTCCTCCGCCCAAACTGC
CTCCTCGTATCGCCGCACTTTTGGCCAAGGCACTTTTGCCTCGCCCTCTCTCAACCGCTC
CATGCTGGGCCACGGCCGCAGCAGTGGCGGCGGAGGTGGCCACGTCACCTCCAGGGTCTA
TGAGGTGACCCGCAGCAGCGCGACGCCCGCCTACCGGGTCTCATCCAGTTGCTATGGGAA
GCCCCTTGGGGCCTCCAGAGTTTCTGTAGGGCGCTCCTACGCCGGCATGGGCGAGATGCT
TGACTTCAGCTTGGCCGACGCCGTCAACCAGGAGTTCCTGACCACAAGGACTAACGAGAA
GGCCGAACTGCAGCACCTCAATGACCGTTTTGCCAGCTACATTGAGAAGGTCCGCTTCCT
GGAGCAGCAAAACCAGGGGCTGACGGTGGAGGTGGAGCGCCTGCGAGGACGCGAGCCCAC
GCGCGTCTCCGACATGTACGAGGAGGAGATGAACGACCTGAGGAGGCAGGTGGAGATCCT
GACCAATCAGAGGTCACACATCGAGGTGGAGCGGGACAATCTCGCCGATGACCTGGACAA
GCTGAAACTCAGACTCCAAGAAGAAATCCTTCAAAAAGAGGACGCAGAAAACAACCTTGC
AGCTTTCAGGGCGGACGTGGACGCTGCCACTCTGGCTCGTCTGGACCTGGAACGACGCAT
CGAGACGCTGCAGGA

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)