Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2585 cluster # 2585       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2585#0 length = 811 sequences # 8  

consensusID : consensus_2585#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 811
fasta sequence
                              [GCCCCTTTGAGAGGCTGTCATGCAGACGAACCGGTCCAGTTCTGTATTTTCGCGTAGAAATCAGGCTGAAGCAATGTGCCGTAGGTTTAGGGTTTTGGATAAGAGAGCGCTTGTGTTTCTATCGTTAGTTTCCATGCTGCACTGCGCTCTGGCTGACGGTAAAACGCTGGTTTTGCTGGACAACCTCAACATCAGAGACACCCATTCAATCTTCTTCCGCAGTCTGGCTGACCGTGGCTTTGACCTGACATTTAAGACGGCGGATGATCCCTCCCTGTCTCTGATCAAATATGGCCAGTTCCTGTATGACCACTTAATTA-TCTTTTCACCATCTGTTGAGGACTTTGGAGGAAACATCAATCTGGAGACAATCACATCTTTCATCGATGGCGGAGGAAATGTTCTGGTTGCTGCCAGTTCAGATATTGGTGACCCTTTGAGGGAGCTGGGCAGTGAGTGTGGCATCGAATTTGACGAGGAAAAGACTGCTGTCATTGACCATCACAACTACGATGTGTCTGATCCTGGAGAGCATACCCTGATTGTTGCAGACCCAGAAAACTTGTTGAAAGCTCCAACTATTGTTGGGAAACCCACCAATAAACCTGTCCTGTTCAAAGGTGTTGGCATGGTGGCAGACCCAGAGAATCCTCTTGTCCTGGACATCCTTACTGGCTCTTCAACGTCTTACTCCTTTTTCCCCGACAGACCAATTACTCAGTACCCCCATGCTGTTGGCAAGAACACCCTCCTGATCGCCGGCCTTCAGGCCAGAAATAACGGCAGAGTTGTTTTCAGGGGCTCTCTGGAC]

[+] EMBL CA588327             [GCCCCTTTGAGAGGCTGTCATGCAGACGAACCGGTCCAGTTCTGTACCTTCGCGTAGAAATCAGGCTGAAGCAATGTGCCGTAGGTTTAGGGTTTTGGATAAGAGAGCGCTTGTGTTTCTATCGTTAGTTTCCATGCTGCACTGCGCTCTGGCTGACGGTAAAACGCTGGTTTTGCTGGACAACCTCAACATCAGAGACACCCATTCAATCTTCTTCCGCAGTCTGGCTGACCGTGGCTTTGACCTGACATTTAAGACGGCGGATGATCCCTCCCTGTCTCTGATCGAATATGGCCAGTTCCTGTATGACCACTTAATTA TCTTTTCACCATCTGTTGAGGACTTTGGAGGAAACATCAATCTGGAGACAATCACATCTTTCATCGATGGCGGAGGAAATGTTCTGGTTGCTGCCAGTTCAGATATTGGTGACCCTTTGAGGGAGCTGGGCAGTGAGTGTGGCATCGAATTTGACGAGGAAAAGACTGCTGTCATTGACCATCACAACTACGATGTGTCTGATCCTGGAGAGCATACCCTGATTGTTGCAGACCCAGAAAACTTGTTGAAAGCTCCAACTATTGTTGGTAAACCCACCAATAAACCTGTCCTGTTCAAAGGTGTTGGCATGGTGGCAGACCCAGAGAATCCTCTTGTCCTGGACATCCTTACTGGCTCTTCAACGTCTTACTCCTTTTTCCCCGACAGACCAATTACTCAGTACCCCCATGCTGTTGGCAAGAACACCCTCCTGATCGCCGGCCTTCAGGCCAGAAATAACGGCAGAGTTGTTTTCAGGGGCTCTCTGGAC]
[+] EMBL BU806858             [               TGTCATGCAGACGAACCGGTCCAGTTCTGTATTTTCGCGTAGAAATCAGGCTGAAGCAATGTGCCGTAGGTTTAGGGTTTTGGATAAGAGAGCGCTTGTGTTTCTATCGTTAGTTTCCATGCTGCACTGCGCTCTGGCTGACGGTAAAACGCTGGTTTTGCTGGACAACCTCAACATCAGAGACACCCATTCAATCTTCTTCCGCAGTCTGGCTGACCGTGGCTTTGACCTGACATTTAAGACGGCGGATGATCCCTCCCTGTCTCTGATCAAATATGGCCAGTTCCTGTATGACCACTTAATTA TCTTTTCACCATCTGTTGAGGACTTTGGAGGAAACATCAATCTGGAGACAATCACATCTTTCATCGATGGCGGAGGAAATGTTCTGGTTGCTGCCAGTTCAGATATTGGTGACCCTTTGAGGGAGCTGGGCAGTGAGTGTGGCATCGAATTTGACGAGGAAAAGACTGCTGTCATTGACCATCACAACTACGATGTGTCTGATCCTGGAGAGCATACCCTGATTGTTGCAGACCCAGAAAACTTGTTGAAAGCTCCAACTATTGTTGGGAAACCCACCAATAAACCTGTCCTGTTCAAAGGT                                                                                                                                                                                             ]
[+] EMBL FR0060357            [                          CGAACCGGTCCAGTTCTGTATTTTCGCGTAGAAATCAGGCTGAAGCAATGTGCCGTAGGTTTAGGGTTTTGGATAAGAGAGCGCTTGTGTTTCTATCGTTAGTTTCCATGCTGCACTGCGCTCTGGCTGACGGTAAAACGCTGGTTTTGCTGGACAACCTCAACATCAGAGACACCCATTCAATCTTCTTCCGCAGTCTGGCTGACCGTGGCTTTGACCTGACATTTAAGACGGCGGATGATCCCTCCCTGTCTCTGATCAAATATGGCCAGTTCCTGTATGACCACTTAATTA TCTTTTCACCATCTGTTGAGGACTTTGGAGGANACATCAATCTGGAGACAATCACATCTTTCATCGATGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL FR0060845            [                            AACCGGGCCAGTTCTGTATTTTCGCGTAGAAATCAGGCCGAAGCAATGTGCCGTAGGTTTAGGGTTTTGGATAAGAGAGCGCTTGTGTTTCTATCGTTAGTTTCCATGCTGCACTGCGCTCTGGCTGACGGTAAAACGCTGGTTTTGCTGGACAACCTCAACATCAGAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BU806109             [                                        TCTGTATTTTCGCGCAGAAATCAGGCTGAAGCAATGTGCCGTAGGTTTAGGGTTTTGGATAAGAGAGCGCTTGTGTTTCTATCGTTAGTTTCCATGCTGCACTGCGCTCTGGCTGACGGTAAAACGCTGGTTTTGCTGGACAACCTCAACATCAGAGACACCCATTCAATCTTCTTCCGCAGTCTGGCTGACCGTGGCTTTGACCTGTCTTTTATTACGGCGGATGATCCCTCCCTGTCTCTGATCAAATATGGCCAGTTCCTGTATGACCACTTAATTA TCTTTTCACCATCTGTTGAGGACTTTGGAGGAAACATCAATCTGGAGACAATCACATCTTTCATCGATG                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL FR0061262            [                                          TGTATTTTCGCGGGGAAATCAGGCTGAAGCAATGTACCGCCGGTTTAGGGTTTTGGATAAGAGAGCGCTTGTGTTTCTATCGTTAGTTTCCATGCTGCACTGCGCTCTGGCTGACGGTAAAACGCTGGTTTTGCTGGACAACCTCAACATCAGAGACACCCATTCAATCTTCTTCCGCAGTCTGGCTGACCGTGGCTTTGACCTGACATTTAAGACGGCGGATGATCCCTCCCTGTCTCTGATCAAATATGGCCAGGTCCTGGATGACCACTTAAATATTCTTTTCACCATCTGGTGAGGACTTTGGAGGAAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL FR0061452            [                                              TTTTCGCGTAGAAATCAGGCTGAAGCAATGTGCCGGAGGTTTAGGGTTTTGGATAAGAGAGCGCTTGTGTTTCTATCGTTAGTTTCCATGCTGCACTGCGCTCTGGCTGACGGTAAAACGCTGGTTTTGCTGGACAACCTCAACATCAGAGACACCCATTCAATCTTCTTCCGCAGTCTGGCTGACCGTGGCTTTGACCTGACATTTAAGACGGCGGATGATCCCTCCCTGTCTCTGATCAAATATGGCCAGTTCCTGTATGACCACTTAATTA TCTTTTCACCATCTGTTGAGGACTTTGGAGGAAACATCAATCTGGAGACAATCACATCTTTCATCGATGGGGGAGGAAATGTTCTGGTTGCTGCCAGTTCCGATATTGGTGACCCTTTGAGGGAGCc                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL FR0061092            [                                                           ATCAGGCTGAAGCAATGTACCGTAGGTTTAGGGTTTTGGATAAGAGAGCGCTTGTGTTTCTATCGTTAGTTTCCATGCTGCACTGCGCTCTGGCTGACGGTAAAACGCTGGTTTTGCTGGACAACCTCAACATCAGAGACACCCATTCAATCTTCTTCCGCAGTCTGGCTGACCGTGGCTTTGACCTGACATTTAAGACGGCGGATGATCCCTCCCTGTCTCTGATCAAATATGGCCAGTTCCTGTATGACCACTTAATTA TCTTTTCACCATCTGTTGAGGACTTTGGAGGAAACATCAATCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_2585#0 GCCCCTTTGAGAGGCTGTCATGCAGACGAACCGGTCCAGTTCTGTATTTTCGCGTAGAAA TCAGGCTGAAGCAATGTGCCGTAGGTTTAGGGTTTTGGATAAGAGAGCGCTTGTGTTTCT ATCGTTAGTTTCCATGCTGCACTGCGCTCTGGCTGACGGTAAAACGCTGGTTTTGCTGGA CAACCTCAACATCAGAGACACCCATTCAATCTTCTTCCGCAGTCTGGCTGACCGTGGCTT TGACCTGACATTTAAGACGGCGGATGATCCCTCCCTGTCTCTGATCAAATATGGCCAGTT CCTGTATGACCACTTAATTATCTTTTCACCATCTGTTGAGGACTTTGGAGGAAACATCAA TCTGGAGACAATCACATCTTTCATCGATGGCGGAGGAAATGTTCTGGTTGCTGCCAGTTC AGATATTGGTGACCCTTTGAGGGAGCTGGGCAGTGAGTGTGGCATCGAATTTGACGAGGA AAAGACTGCTGTCATTGACCATCACAACTACGATGTGTCTGATCCTGGAGAGCATACCCT GATTGTTGCAGACCCAGAAAACTTGTTGAAAGCTCCAACTATTGTTGGGAAACCCACCAA TAAACCTGTCCTGTTCAAAGGTGTTGGCATGGTGGCAGACCCAGAGAATCCTCTTGTCCT GGACATCCTTACTGGCTCTTCAACGTCTTACTCCTTTTTCCCCGACAGACCAATTACTCA GTACCCCCATGCTGTTGGCAAGAACACCCTCCTGATCGCCGGCCTTCAGGCCAGAAATAA CGGCAGAGTTGTTTTCAGGGGCTCTCTGGAC



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)