Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2591 cluster # 2591       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2591#0 length = 622 sequences # 8  

consensusID : consensus_2591#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 622
fasta sequence
                              [TGAATGTGTCTAAATGAGTGTGTGTGTGTCCACAGCAGCCGGCAGAA-GTGA-CATTCATCA-GTTTAAC-TCGTTTGGAATTAATGAAACAACT-TTAAAACGTGGATTTACACATTCACAAGAGATGCCCTGTGTACAAGCCCAGCATGCATCC-CTGCC----CCCGGACAC---CAACTA--CATC-TCTGAGTTCCTAAATCCTGATCTCAGTGCCAAGGTGATGATGGACATCAGCAGCCAGAAGGACCAGCTGTCAGTGGCCTCGCTGCCCAGCATCCACACCTTGGTGGGAAATAGCTGCATGGGGGAGTTTGATGCGTACTCCTGCAAGATCACTGCGTCCCCTTCTGCATCTTCGGTTTCATTCAGTCACGTCTCAGGATCTGAAAACTCTTGTCCCCAGACGCAGAGCCAAGCCCTAAAAATGGATGATCTACAGATGTATGGCTGTTACCCAGGATCCTTTGTTTTGAGCTACCTTGATGAAACACTGTCCTCATGTGACTCTGACTACTATGGCAGCCCGGGTTATGGGGCCTCCTCCCCTCCAACACCTGGATTTCAGAACTTCTCTACATCACTGTGGGATTCCCCATTCAGTCCCTACCCATCAGCTCCTCCGGCCTCTGTG]

[+] EMBL BU804766             [TGAATGTGTCTAAATGAGTGTGTGTGTGTCCACAGCAGCCGGCAGAA GTGA CATTCATCA GTTTAAC TCGTTTGGAATTAATGAAACAACT TTAAAACGTGGATTTACACATTCACAAGAGATGCCCTGTGTACAAGCCCAGCATGCATCCNCTGNCCCNNCCGGNACACNCNCAACTANNCATCTTCTGAGTTCCTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BU808006             [  AATGTGTCTAAATGAGTGTGTGTGTGTCCACAGCAGCCGGCAGAA GTGA CATTCATCA GTTTAAC TCGTTTGGAATTAATGAAACAACT TTAAAACGTGGATTTACACATTCACAAGAGATGCCCTGTGTACAAGCCCAGCATGCATCC CTGCC    CCCGGACAC   CAACTA  CATC TCTGAGTTCCTAAATCCTGATCTCAGTGCCAAGGTGATGATGGACATCAGCAGCCAGAAGGACCAGCTGTCAGTGGCCTCGCTGCCCAGCATCCACACCTTGGTGGGAAATAGCTGCATGGGGGAGTTTGATGCGTACTCCTGCAAGATCACTGCGTCCCCTTCTGCATCTTCGGTTTCATTCAGTCACGTCTCAGGATCTGAAAACTCTTGTCCCCAGACGCAGAGCCAAGCCCTAAAAATGGATGATCTACAGATGTATGGCTGTTACCCAGGATCCTTTGTTTTGAGCTACCTTGATGAAACACTGTCCTCATGTGACTCTGACTACTATGGCAGCCCGGGTTATGGGGCCTCCTCCCCTCCAACACCTGGATTTCAGAACTTCCCTACATCACTGTGGGATTCCCCATTCAGTCCCTACCCATCAGCTCCTCCGGCCTCTGTG]
[+] EMBL CA589349             [  AATGTGTCTAAATGAGTGCGTGTGTGTCCACAGCAGCCGGCACAA GTGA CATTCATCA GTTTAAC TCGTTTGGAATTAATGAAACAACT TTAAAACGTGGATTTACACATTCACAAGAGATGCCCTGTGTACAAGCCCAGCATGCATCC CTGCC    CCCGGACAC   CAACTA  CATC TCTGAGTTCCTGAATCCTGATCTCAGTGCCAAGGTGATGATGGACATCAGCAGCCAGAAGGACCAGCTGTCAGTGGCCTCGCTGCCCAGCATCCACACCTTGGTGGGAAATAGCTGCATGGGGGAGTTTGATGCGTACTCCTGCAAGATCACTGCGTCCCCTTCTGCATCTTCGGTTTCATTCAGTCACGTCTCAGGATCTGAAAACTCTTGTCCCCAGACGCAGAGCCAAGCCCTAAAAATGGATGATCTACAGATGTATGGCTGTTACCCAGGATCCTTTGTTTTGAGCTACCTTGATGAAACACTGTCCTCATGTGACTCTGACTACTATGGCAGCCCGGGTTATGGGGCCTCCTCCCCTCCAACACCTGGATTTCAGAACTTCTCTACATCACTGTGGGATTCCCCATTCAGTCCCTACCCATCAGCTC              ]
[+] EMBL CA591116             [  AATGTGTCTAAATGAGTGTGTGTGTGTCCACAGCAGCCGGCAGAA GTGA CATTCATCA GTTTAAC TCGTTTGGAATTAATGAAACAACT TTAAAACGTGGATTTACACATTCACAAGAGATGCCCTGTGTACAAGCCCAGCATGCATCC CTGCC    CCCGGACAC   CAACTA  CATC TCTGAGTTCCTAAATCCTGATCTCAGTGCCAAGGTGATGATGGACATCAGCAGCCAGAAGGACCAGCTGTCAGTGGCCTCGCTGCCCAGCATCCACACCTTGGTGGGAAATAGCTGCATGGGGGAGTTTGATGCGTACTCCTGCAAGATCACTGCGTCCCCTTCTGCATCTTCGGTTTCATTCAGTCACGTCTCAGGATCTGAAAACTCTTGTCCCCAGACGCAGAGCCAAGCCCTAAAAATGGATGATCTACAGATGTATGGCTGTTACCCAGGATCCTTTGTTTTGAGCTACCTTGATGAAACACTGTCCTCATGTGACTCTGACTACTATGGCAGCCCGGGTTATGGGGCCTCCTCCCCTCCAACACCTGGATTTCAGGACTTCTCTACATCACTGTGGGATTCCCCATTTAGT                              ]
[+] EMBL FR0063544            [                        TGTGTCCACAGCAGCCGGCACAA GTGA CATTCATCA GTTTAAC TCGTTTGGAATGAATGAAACAACT TTAAAACGTGGATTTACACATTCACAAGAGATGCCCTGTGTACAAGCCCAGCATGCATCC CTGCC    CCCGGACAC   CAACTA  CATC TCTGAGTTCCTGAATCCTGATCTCAGTGCCAAGGTGATGATGGACATCAGCAGCCAGAAGGACCAGCTGTCAGTGGCCTCGCTGCCCAGCATCCACACCTTGGTGGGAAATAGCTGCATGGGGGAGTTTGATGCGTACTCCTGCAAGATCACTGCGTCCCCTTCTGCATCTTCGGNTTCATTCAGTCACGT                                                                                                                                                                                                                                                                ]
[+] EMBL FR0063781            [                                   atGCCGGCACAACGTGATCATTCATCACGTTTAACTTCGTTTGGAATTAATGAAACAACTGGTAAAACGTGGATTTACACATTCACAACACATGCCCTGTGTACAAGCCCAGCAT CATCC CTGCC    CCCGGACAC   CAACTA  CATC TCTGAGTTCCTGAATCCTGATCTCAGTGCCAAGGTGATGATGGACATCAGTAGCCAGAAGGACCAGCTGTCAGTGGCCTCGCTGCCCAGCATCCACACCTTGGGGGGAAATAGCTGCATGAGGGAGTTTGATGCGGACTCCTGCAAGATCACTGCGTCCCCTTCTGCATCTTCGGTTTCATTCAGGCACGTCTCAG                                                                                                                                                                                                                                                           ]
[+] EMBL BU806658             [                                                     CATTCATCA GTTTAAC TCGTTTGGAATTAATGAAACAACT TTAAAACGTGGATTTACACATTCACAAGAGATGCCCTGTGTACAAGCCCAGCATGCATCC CTGCC    CCCGGACAC   CAACTA  CATC TCTGAGTTCCTAAATCCTGATCTCAGTGCCAAGGTGTTGATGGACATCAGCAGCCAGAAGGACCAGCTGTCAGTGGCCTCGCTGCCCAGCATCCACACCTTGGTGGGAAATAGCTGCATGGGGGAGTTTGATGCGTACTCCTGCAAGATCACTGCGTCCCCTTCTGCATCTTCGGTTTCATTCAGTCACGTCTCAGGATCTGAAAACTCTTGTCCCCAGACGCAGAGCCAAGCCCTAAAAATGGATGATCTACAGATGTATGGCTGTTACCCAGGATCCTTTGTTTTGAGCTACCTTGATGAAACACTGTCCTCATGTGACTCTGACTACTATGGCAGCCCGGGTTATGGGGCCTCCTCCCCTCCAACACCTGGATTTCAGAACTTCTCTACATCACTGTGGGATTCCCCATTCA                                ]
[+] EMBL BU805400             [                                                                                                                  CATTCACAAGAGATGCCCTGTGTACAAGCCCAGCATGCATCC CTGCC    CCCGGACAC   CAACTA  CATC TCTGAGTTCCTAAATCCTGATCTCAGTGCCAAGGTGATGATGGACATCAGCAGCCAGAAGGACCAGCTGTCTGTGGCCTCGCTGCCCAGCATCCACACCTTGGTGGGATATAGCTGCATGGGGGAGTTTGATGCGTACTCCTGCAAGATCACTGCGTCCCCTTCTGCGTCTTCGGTTTCATTCAGTCACGTCTCAGGATCTGAAAACTCTTGTCCCCAGACGCAGAGCCAAGCCCTAAAAATGGATGATCTACAGATGTATGGCTGTTACCCAGGATCCTTTGTTTTGAGCTACCTTGATGAAACACTGTCCTCATGTGACTCTGACTACTATGGCAGCCCGGGTTATGGGGCCTCCTCCCCTCCA                                                                                 ]


>consensus_2591#0 TGAATGTGTCTAAATGAGTGTGTGTGTGTCCACAGCAGCCGGCAGAAGTGACATTCATCA GTTTAACTCGTTTGGAATTAATGAAACAACTTTAAAACGTGGATTTACACATTCACAAGA GATGCCCTGTGTACAAGCCCAGCATGCATCCCTGCCCCCGGACACCAACTACATCTCTGA GTTCCTAAATCCTGATCTCAGTGCCAAGGTGATGATGGACATCAGCAGCCAGAAGGACCA GCTGTCAGTGGCCTCGCTGCCCAGCATCCACACCTTGGTGGGAAATAGCTGCATGGGGGA GTTTGATGCGTACTCCTGCAAGATCACTGCGTCCCCTTCTGCATCTTCGGTTTCATTCAG TCACGTCTCAGGATCTGAAAACTCTTGTCCCCAGACGCAGAGCCAAGCCCTAAAAATGGA TGATCTACAGATGTATGGCTGTTACCCAGGATCCTTTGTTTTGAGCTACCTTGATGAAAC ACTGTCCTCATGTGACTCTGACTACTATGGCAGCCCGGGTTATGGGGCCTCCTCCCCTCC AACACCTGGATTTCAGAACTTCTCTACATCACTGTGGGATTCCCCATTCAGTCCCTACCC ATCAGCTCCTCCGGCCTCTGTG



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)