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Takifugu rubripes
cluster # 2592 cluster # 2592       Sequences # 8       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2592#0 length = 654 sequences # 7  
 consensus_2592#1 length = 409 sequences # 1  
consensusID : consensus_2592#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 654
fasta sequence 
                              [GTTGGGCAACAAGCAGCAAACGTATCGGTGGAAGCGGCCGTCAGCCGAACCGTGAGAGCCGCCAGCGCCACCTCCAGCTCCGCGTTGATGCCAGTGCGCCTCTCTTATGCTGTCGAGGCGGTTTCGCCTTGATTTGAGCTGTTTTTCCAGAGACGGAAGCTGATGTGAGCTACGCAGGACTTCGGTTCCGACGCGGTTTGTTAGCATTAGCAGCCCCGAACTCCGCGCAGCTTGTTTTGGACATTCCGTGGAGCTCTCCAGAACAGTCCACCAGCGATGGCGGCTGCAGGGGCGAGCGGGAAGACCTACTCGTTTAAGGCGGTGCTGTTGGGGGAAGGTTGCGTCGGGAAGACGTCGCTGGTCCTTCGGTACTGCGAGAACAAGTTCAACGACAAACACATCACAACGCTACAGGCATCGTTCCTCAACAAGAAGCTCAACATCACAGGAAAGAGAGTCAATCTGGCCATCTGGGACACAGCGGGTCAGGAGCGCTTCCACGCGCTTGGTCCCATCTACTACAGAGACTCCAACGGCGCCATCCTGGTGTACGACGTCACGGACGAAGACTCCTTTCAGAAGGTGAAGAACTGGGTGAAGGAACTGAGGAAAATGTTGGGCAATGACATTTGTTTATGTATAGTAGGGAATAAA]

[+] EMBL CA590498             [GTTGGGCAACAAGCAGCAAACGTATCGGTGGAAGCGGCCGTCAGCCGAACCGTGAGAGCCGCCAGCGCCACCTCCAGCTCCGCGTTGATGCCAGTGCGCCTCTCTTATGCTGTCGAGGCGGTTTCGCCTTGATTTGAGCTGTTTTTCCAGAGACGGAAGCTGATGTGAGCTACGCAGGACTTCGGTTCCGACGCGGTTTGTTAGCATTAGCAGCCCCGAACTCCGCGCAGCTTGTTTTGGACATTCCGTGGAGCTCTCCAGAACAGTCCACCAGCGATGGCGGCTGCAGGGGCGAGCGGGAAGACCTACTCGTTTAAGGCGGTGCTGTTGGGGGAAGGTTGCGTCGGGAAGACGTCGCTGGTCCTTCGGTACTGCGAGAACAAGTTCAACGACAAACACATCACAACGCTACAGGCATCGTTCCTCAACAAGAAGCTCAA                                                                                                                                                                                                                      ]
[+] EMBL BU804807             [    GGCAACAAGCAGCAAACGTATCGGTGGAAGCGGCCGTCAGCCGAACCGTGAGAGCCGCCAGCGCCACCTCCAGCTCCGCGTTGATGCCAGTGCGCCTCTCTTATGCTGTCGAGGCGGTTTCGCCTTGATTTGAGCTGTTTTTCCAGAGACGGAAGCTGATGTGAGCTACGCAGGACTTCGGTTCCGACGCGGTTTGTTAGCATTAGCAGCCCCGAACTCCGCGCAGCTTGTTTTGGACATTCCGTGGAGCTCTCCAGAACAGTCCACCAGCGATGGCGGCTGCAGGGGCGAGCGGGAAGACCTACTCGTTTAAGGCGGTGCTGTTGGGGGAAGGTTGCGTCGGGAAGACGTCGCTGGTCCTTCGGTACTGCGAGAACAAGTTCAACGACAAACACATCACAACGCTACAGGCATCGTTCCTCAACAAGAAGCTCAACATCACAGGAAAGAGAGTCAATCTGGCCATCTGGGACACAGCGGGTCAGGAGCGCTTCCACGCGCTTGGTCCCATCTACTACAGAGACTCCAACGGCGCCATCCTGGTGTACGACGTCACGGACGAAGACTCCTTTCAGAAGGTGAAGAACTGGGTGAAGGAACTGAGGAAAATGTTGGGCAATGACATTTGTTTATGTATAGTAGGGAATAAA]
[+] EMBL CA590707             [                          GGTGGAAGCGGCCGTCAGCCGAACCGTGAGAGCCGCCAGCGCCACCTCCAGCTCCGCGTTGATGCCAGTGCGCCTCTCTTATGCTGTCGAGGCGGTTTCGCCTTGATTTGAGCTGTTTTTCCAGAGACGGAAGCTGATGTGAGCTACGCAGGACTTCGGTTCCGACGCGGTTTGTTAGCATTAGCAGCCCCGAACTCCGCGCAGCTTGTTTTGGACATTCCGTGGAGCTCTCCAGAACAGTCCACCAGCGATGGCGGCTGCAGGGGCGAGCGGGAAGACCTACTCGTTTAAGGCGGTGCTGTTGGGGGAAGGTTGCGTCGGGAAGACGTCGCTGGTCCTTCGGTACTGCGAGAACAAGTTCAACGACAAACACGTCACAACGCTACAGGCATCGTTCCTCAACAAGAAGCTCAACATCACAGGAAAGAGAGTCAATCTGGCCATCTGGGACACAGCGGGTCAGGAGCGCTTCCACGCGCTTGGTCCCATCTACTACAGAGACTCCAACGGCGCCATCCTGGTGTACGACGTCACGGACGAAGACTCCTTTCAGAAGGTGAAGAACTGGGTGAAGGAACTGAGGAAAATGTTTGGCAATGACATTTGTTTATGTATA            ]
[+] EMBL BU808190             [                          GGTGGAAGCGGCCGTCAGCCGAACCGTGAGAGCCGCCAGCGCCACCTCCAGCTCCGCGTTGATGCCAGTGCGCCTCTCTTATGCTGTCGAGGCGGTTTCGCCTTGATTTGAGCTGTTTTTCCAGAGACGGAAGCTGATGTGAGCTACGCAGGACTTCGGTTCCGACGCGGTTTGTTAGCATTAGCAGCCCCGAACTCCGCGCAGCTTGTTTTGGACATTCCGTGGAGCTCTCCAGAACAGTCCACCAGCGATGGCGGCTGCAGGGGCGAGCGGGAAGACCTACTCGTTTAAGGCGGTGCTGTTGGGGGAAGGTTGCGTCGGGAAGACGTCGCTGGTCCTTCGGTACTGCGAGAACAAGTTCAACGACAAACACATCACAACGCTACAGGCATCGTTCCTCAACAAGAAGCTCAACATCACAGGAAAGAGAGTCAATCTGGCCAT                                                                                                                                                                                        ]
[+] EMBL FR0063656            [                               AAGCGGCCGTCAGCCGAACCGTGAGAGCCGCCAGCGCCACCTCCAGCTCCGCGTTGATGCCAGGGCGCCTCTCTTATGCTGTCGAGGCGGTTTCGCCTTGATTTGAGCTGTTTTTCCAGAGACGGAAGCTGATGTGAGCTACGCAGGACTTCGGTTCCGACGCGGTTTGTTAGCATTAGCAGCCCCGAACTCCGCGCAGCTTGTTTTGGACATTCCGGGGAGCTCTCCAGAACAGTCCACCAGCGATGGCGGCTGCATGTGCGAGC                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL FR0060494            [                                     CCGTCAGCCGAACCGTGAGAGCCGCCAGCGCCACCTCCAGCTCCGCGTTGATGCCAGTGCGCCTCTCTTATGCTGTCGAGGCGGTTTCGCCTTGATTTGAGCTGTTTTTCCAGAGACGGAAGCTGATGTGAGCTACGCAGGACTTCGGTTCCGACGCGGTTTGTTAGCATTAGCAGCCCCGAACTCCGCGCAGCTTGTTTTGGACATTCCGTGGAGCTCTCCAGAACAGTCCACCAGCGATGGCGTCTGCAGGGGCGAGCGGGAAGACCTACTCGTTTAAGGCGGTGCTGTTGGGGGAAGGTTGCGTCGGGAAGACGTCGCTGTTCCTTCGGTACTGCGAGAACAAGTTCAACGACAAACACATCACAACGCTTACAGCTTCGTTCCTCAAC AGGAGCTCAA                                                                                                                                                                                                                      ]
[+] EMBL FR0060174            [                                                                                             GTGCGCCTCTCTTATGCTGTCGAGGCGGTTTCGCCTTGATTTGAGCTGTTTTTCCAGAGACGGAAGCTGATGTGAGCTACGCAGGACTTCGGTTCCGACGCGGTTTGTTAGCATTAGCAGCCCCGAACTCCGCGCAGCTTGTTTTGGACATTCCGTGGAGCTCTCCAGAACAGTCCACCAGCGATGGCGGCTGCAGGGGCGAGCGGGAAGACCTACTCGGTTAAGGCGG                                                                                                                                                                                                                                                                                                                                            ]




>consensus_2592#0
GTTGGGCAACAAGCAGCAAACGTATCGGTGGAAGCGGCCGTCAGCCGAACCGTGAGAGCC
GCCAGCGCCACCTCCAGCTCCGCGTTGATGCCAGTGCGCCTCTCTTATGCTGTCGAGGCG
GTTTCGCCTTGATTTGAGCTGTTTTTCCAGAGACGGAAGCTGATGTGAGCTACGCAGGAC
TTCGGTTCCGACGCGGTTTGTTAGCATTAGCAGCCCCGAACTCCGCGCAGCTTGTTTTGG
ACATTCCGTGGAGCTCTCCAGAACAGTCCACCAGCGATGGCGGCTGCAGGGGCGAGCGGG
AAGACCTACTCGTTTAAGGCGGTGCTGTTGGGGGAAGGTTGCGTCGGGAAGACGTCGCTG
GTCCTTCGGTACTGCGAGAACAAGTTCAACGACAAACACATCACAACGCTACAGGCATCG
TTCCTCAACAAGAAGCTCAACATCACAGGAAAGAGAGTCAATCTGGCCATCTGGGACACA
GCGGGTCAGGAGCGCTTCCACGCGCTTGGTCCCATCTACTACAGAGACTCCAACGGCGCC
ATCCTGGTGTACGACGTCACGGACGAAGACTCCTTTCAGAAGGTGAAGAACTGGGTGAAG
GAACTGAGGAAAATGTTGGGCAATGACATTTGTTTATGTATAGTAGGGAATAAA

consensusID : consensus_2592#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 409
fasta sequence 
                              [GGTGGAAGCGGCCGTCAGCCGAACCGTGAGAGCCGCCAGCGCCACCTCCAGCTCCGCGTTGATGCCAGTGCGCCTCTCTTATGCTGTCGAGGCGGTTTCGCCTTGATTTGAGCTGTTTTTCCAGAGACGGAAGCTGATGTGAGCTACGCAGGACTTCGGTTCCGACGCGGTTTGTTAGCATTAGCAGCCCCGAACTCCGCGCAGCTTGTTTTGGACATTCCGTGGAGCTCTCCATAACAGTCCACCAGCGATGGCGGCTGCAGGGGCGAGCGGGAAGACCTACTCGTTTAAGGCGGTGCTGTTGGGGGAAGGTTGCGTCGGGAAGACGTCGGTGGGCCTTCGGGACTGGGAGAACAAGGGTCACGGCGAGGCCGTCGCAGGGGTACGGGGGTCGGTGCTCAGGCGGGCG]

[+] EMBL BU804870             [GGTGGAAGCGGCCGTCAGCCGAACCGTGAGAGCCGCCAGCGCCACCTCCAGCTCCGCGTTGATGCCAGTGCGCCTCTCTTATGCTGTCGAGGCGGTTTCGCCTTGATTTGAGCTGTTTTTCCAGAGACGGAAGCTGATGTGAGCTACGCAGGACTTCGGTTCCGACGCGGTTTGTTAGCATTAGCAGCCCCGAACTCCGCGCAGCTTGTTTTGGACATTCCGTGGAGCTCTCCATAACAGTCCACCAGCGATGGCGGCTGCAGGGGCGAGCGGGAAGACCTACTCGTTTAAGGCGGTGCTGTTGGGGGAAGGTTGCGTCGGGAAGACGTCGGTGGGCCTTCGGGACTGGGAGAACAAGGGTCACGGCGAGGCCGTCGCAGGGGTACGGGGGTCGGTGCTCAGGCGGGCG]




>consensus_2592#1
GGTGGAAGCGGCCGTCAGCCGAACCGTGAGAGCCGCCAGCGCCACCTCCAGCTCCGCGTT
GATGCCAGTGCGCCTCTCTTATGCTGTCGAGGCGGTTTCGCCTTGATTTGAGCTGTTTTT
CCAGAGACGGAAGCTGATGTGAGCTACGCAGGACTTCGGTTCCGACGCGGTTTGTTAGCA
TTAGCAGCCCCGAACTCCGCGCAGCTTGTTTTGGACATTCCGTGGAGCTCTCCATAACAG
TCCACCAGCGATGGCGGCTGCAGGGGCGAGCGGGAAGACCTACTCGTTTAAGGCGGTGCT
GTTGGGGGAAGGTTGCGTCGGGAAGACGTCGGTGGGCCTTCGGGACTGGGAGAACAAGGG
TCACGGCGAGGCCGTCGCAGGGGTACGGGGGTCGGTGCTCAGGCGGGCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2592#0      GTTGGGCAACAAGCAGCAAACGTATCGGTGGAAGCGGCCGTCAGCCGAACCGTGAGAGCC 60
consensus_2592#1      --------------------------GGTGGAAGCGGCCGTCAGCCGAACCGTGAGAGCC 34
                                                **********************************

consensus_2592#0      GCCAGCGCCACCTCCAGCTCCGCGTTGATGCCAGTGCGCCTCTCTTATGCTGTCGAGGCG 120
consensus_2592#1      GCCAGCGCCACCTCCAGCTCCGCGTTGATGCCAGTGCGCCTCTCTTATGCTGTCGAGGCG 94
                      ************************************************************

consensus_2592#0      GTTTCGCCTTGATTTGAGCTGTTTTTCCAGAGACGGAAGCTGATGTGAGCTACGCAGGAC 180
consensus_2592#1      GTTTCGCCTTGATTTGAGCTGTTTTTCCAGAGACGGAAGCTGATGTGAGCTACGCAGGAC 154
                      ************************************************************

consensus_2592#0      TTCGGTTCCGACGCGGTTTGTTAGCATTAGCAGCCCCGAACTCCGCGCAGCTTGTTTTGG 240
consensus_2592#1      TTCGGTTCCGACGCGGTTTGTTAGCATTAGCAGCCCCGAACTCCGCGCAGCTTGTTTTGG 214
                      ************************************************************

consensus_2592#0      ACATTCCGTGGAGCTCTCCAGAACAGTCCACCAGCGATGGCGGCTGCAGGGGCGAGCGGG 300
consensus_2592#1      ACATTCCGTGGAGCTCTCCATAACAGTCCACCAGCGATGGCGGCTGCAGGGGCGAGCGGG 274
                      ******************** ***************************************

consensus_2592#0      AAGACCTACTCGTTTAAGGCGGTGCTGTTGGGGGAAGGTTGCGTCGGGAAGACGTCGCTG 360
consensus_2592#1      AAGACCTACTCGTTTAAGGCGGTGCTGTTGGGGGAAGGTTGCGTCGGGAAGACGTCGGTG 334
                      ********************************************************* **

consensus_2592#0      GTCCTTCGGTACTGCGAGAACAAGTTCAACGACAAACACATCACAACGCTACAGGCATCG 420
consensus_2592#1      GGCCTTCGGGACTGGGAGAACAAGGGTCACGGCGAGGCCGTCGCAGGGGTACGGGGGTCG 394
                      * ******* **** *********    *** * *   * ** **  * *** **  ***

consensus_2592#0      TTCCTCAACAAGAAGCTCAACATCACAGGAAAGAGAGTCAATCTGGCCATCTGGGACACA 480
consensus_2592#1      GTGCTCAGGCGGGCG--------------------------------------------- 409
                       * ****    *  *                                             

consensus_2592#0      GCGGGTCAGGAGCGCTTCCACGCGCTTGGTCCCATCTACTACAGAGACTCCAACGGCGCC 540
consensus_2592#1      ------------------------------------------------------------
                                                                                  

consensus_2592#0      ATCCTGGTGTACGACGTCACGGACGAAGACTCCTTTCAGAAGGTGAAGAACTGGGTGAAG 600
consensus_2592#1      ------------------------------------------------------------
                                                                                  

consensus_2592#0      GAACTGAGGAAAATGTTGGGCAATGACATTTGTTTATGTATAGTAGGGAATAAA 654
consensus_2592#1      ------------------------------------------------------


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)